RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 CCL24O00175 119 aa6.34□□□□□ -1.4
THBS3-201ENST00000368378 C11orf72Q8NBR9 251 aa6.34□□□□□ -1.4
THBS3-201ENST00000368378 A0A1B0GX51 115 aa6.33□□□□□ -1.4
THBS3-201ENST00000368378 DAZ2Q13117 558 aaKnown RBP6.33□□□□□ -1.4
THBS3-201ENST00000368378 DAZ4Q86SG3 579 aaKnown RBP6.33□□□□□ -1.4
THBS3-201ENST00000368378 DAZ3Q9NR90 486 aaKnown RBP6.33□□□□□ -1.4
THBS3-201ENST00000368378 PYGO1Q9Y3Y4 419 aa6.33□□□□□ -1.4
THBS3-201ENST00000368378 IGLV4-60A0A075B6I1 120 aa6.33□□□□□ -1.4
THBS3-201ENST00000368378 FAM218AQ96MZ4 157 aa6.33□□□□□ -1.4
THBS3-201ENST00000368378 NOTCH1P46531 2555 aa6.33□□□□□ -1.4
THBS3-201ENST00000368378 TRBV30A0A0K0K1B3 111 aa6.32□□□□□ -1.4
THBS3-201ENST00000368378 INAFM1C9JVW0 142 aa6.32□□□□□ -1.4
THBS3-201ENST00000368378 BAALC-AS2P0C853 105 aa6.32□□□□□ -1.4
THBS3-201ENST00000368378 SMIM1B2RUZ4 78 aa6.32□□□□□ -1.4
THBS3-201ENST00000368378 K7EQD1 137 aa6.32□□□□□ -1.4
THBS3-201ENST00000368378 Q5XG85 94 aa6.32□□□□□ -1.4
THBS3-201ENST00000368378 IGKV3D-7A0A0C4DH55 119 aa6.32□□□□□ -1.4
THBS3-201ENST00000368378 Q8N3U1 123 aa6.32□□□□□ -1.4
THBS3-201ENST00000368378 C11orf45Q8TAV5 145 aa6.32□□□□□ -1.4
THBS3-201ENST00000368378 DNAL4O96015 105 aa6.31□□□□□ -1.4
THBS3-201ENST00000368378 RPS28P62857 69 aaKnown RBP6.31□□□□□ -1.4
THBS3-201ENST00000368378 C14orf132Q9NPU4 83 aa6.31□□□□□ -1.4
THBS3-201ENST00000368378 DNAJC9-AS1A6NH13 148 aa6.3□□□□□ -1.4
THBS3-201ENST00000368378 LST1O00453 97 aa6.3□□□□□ -1.4
THBS3-201ENST00000368378 LY6G6DO95868 133 aa6.3□□□□□ -1.4
THBS3-201ENST00000368378 KRTAP1-3Q8IUG1 177 aa6.3□□□□□ -1.4
THBS3-201ENST00000368378 LINC01561Q8N1V8 128 aa6.3□□□□□ -1.4
THBS3-201ENST00000368378 CRPP02741 224 aa6.3□□□□□ -1.4
THBS3-201ENST00000368378 C9orf129Q5T035 196 aaKnown RBP6.3□□□□□ -1.4
THBS3-201ENST00000368378 LINC00482Q8N8I6 264 aa6.3□□□□□ -1.4
THBS3-201ENST00000368378 C4orf3Q8WVX3 66 aa6.3□□□□□ -1.4
THBS3-201ENST00000368378 TMEM243Q9BU79 118 aa6.3□□□□□ -1.4
THBS3-201ENST00000368378 SND1-IT1Q9HBX3 110 aa6.3□□□□□ -1.4
THBS3-201ENST00000368378 FBN1P35555 2871 aaKnown RBP6.3□□□□□ -1.4
THBS3-201ENST00000368378 C3orf22Q8N5N4 141 aa6.3□□□□□ -1.4
THBS3-201ENST00000368378 DSCR8Q96T75 97 aa6.29□□□□□ -1.4
THBS3-201ENST00000368378 LECT2O14960 151 aa6.29□□□□□ -1.4
THBS3-201ENST00000368378 NDUFA1O15239 70 aa6.29□□□□□ -1.4
THBS3-201ENST00000368378 C9orf116Q5BN46 136 aaPredicted RBP6.29□□□□□ -1.4
THBS3-201ENST00000368378 SDIM1Q6ZPB5 146 aa6.29□□□□□ -1.4
THBS3-201ENST00000368378 A0A087WYN8 130 aa6.28□□□□□ -1.4
THBS3-201ENST00000368378 NCR3O14931 201 aa6.28□□□□□ -1.4
THBS3-201ENST00000368378 FSHBP01225 129 aa6.28□□□□□ -1.4
THBS3-201ENST00000368378 LINC00337Q8N6G1 96 aa6.28□□□□□ -1.4
THBS3-201ENST00000368378 SPANXDQ9BXN6 97 aa6.28□□□□□ -1.4
THBS3-201ENST00000368378 CDC42SE2Q9NRR3 84 aa6.28□□□□□ -1.4
THBS3-201ENST00000368378 SPANXCQ9NY87 97 aa6.28□□□□□ -1.4
THBS3-201ENST00000368378 hADV29S1A0JD25 119 aa6.28□□□□□ -1.4
THBS3-201ENST00000368378 A8MTW9 85 aa6.28□□□□□ -1.4
THBS3-201ENST00000368378 WFDC9Q8NEX5 89 aa6.28□□□□□ -1.4
THBS3-201ENST00000368378 A0A087WVE0 104 aa6.27□□□□□ -1.41
THBS3-201ENST00000368378 SMCR5Q8TEV8 140 aa6.27□□□□□ -1.41
THBS3-201ENST00000368378 CYSTM1Q9H1C7 97 aa6.27□□□□□ -1.41
THBS3-201ENST00000368378 GYPEP15421 78 aa6.26□□□□□ -1.41
THBS3-201ENST00000368378 COX7B2Q8TF08 81 aa6.26□□□□□ -1.41
THBS3-201ENST00000368378 COX7A2LO14548 114 aa6.26□□□□□ -1.41
THBS3-201ENST00000368378 HIST1H4AP62805 103 aaKnown RBP6.26□□□□□ -1.41
THBS3-201ENST00000368378 BEAN1Q3B7T3 259 aa6.26□□□□□ -1.41
THBS3-201ENST00000368378 H3BT86 120 aa6.25□□□□□ -1.41
THBS3-201ENST00000368378 UQCRQO14949 82 aa6.25□□□□□ -1.41
THBS3-201ENST00000368378 SMIM11BQ8TCY0 68 aa6.25□□□□□ -1.41
THBS3-201ENST00000368378 DEFB135Q30KP9 77 aa6.24□□□□□ -1.41
THBS3-201ENST00000368378 CCL18P55774 89 aa6.24□□□□□ -1.41
THBS3-201ENST00000368378 SPATA3Q8NHX4 192 aa6.24□□□□□ -1.41
THBS3-201ENST00000368378 LINC01006Q8NI28 216 aa6.23□□□□□ -1.41
THBS3-201ENST00000368378 MGAM2Q2M2H8 2515 aa6.23□□□□□ -1.41
THBS3-201ENST00000368378 ANGP03950 147 aaKnown RBP6.23□□□□□ -1.41
THBS3-201ENST00000368378 DPH3Q96FX2 82 aa6.23□□□□□ -1.41
THBS3-201ENST00000368378 LINC00269Q8N2A0 174 aa6.23□□□□□ -1.41
THBS3-201ENST00000368378 IGKV2-28A0A075B6P5 120 aa6.22□□□□□ -1.41
THBS3-201ENST00000368378 TRBV7-7A0A0K0K1E9 115 aa6.22□□□□□ -1.41
THBS3-201ENST00000368378 IGKV2D-28P01615 120 aa6.22□□□□□ -1.41
THBS3-201ENST00000368378 GIG44P09565 113 aaPredicted RBP6.22□□□□□ -1.41
THBS3-201ENST00000368378 CD164Q04900 197 aa6.22□□□□□ -1.41
THBS3-201ENST00000368378 IGLV5-45A0A087WSX0 123 aa6.22□□□□□ -1.41
THBS3-201ENST00000368378 IGLV5-39A0A0G2JS06 123 aa6.21□□□□□ -1.41
THBS3-201ENST00000368378 PMAIP1Q13794 54 aa6.21□□□□□ -1.41
THBS3-201ENST00000368378 TRBV6-8A0A0A6YYG3 113 aa6.21□□□□□ -1.42
THBS3-201ENST00000368378 TRACP01848 142 aa6.21□□□□□ -1.42
THBS3-201ENST00000368378 TIMM17BO60830 172 aa6.21□□□□□ -1.42
THBS3-201ENST00000368378 CSMD3Q7Z407 3707 aa6.2□□□□□ -1.42
THBS3-201ENST00000368378 TRBV10-1A0A0K0K1A3 114 aa6.2□□□□□ -1.42
THBS3-201ENST00000368378 KRTAP1-1Q07627 177 aa6.2□□□□□ -1.42
THBS3-201ENST00000368378 C6orf223Q8N319 242 aa6.2□□□□□ -1.42
THBS3-201ENST00000368378 BRK1Q8WUW1 75 aa6.2□□□□□ -1.42
THBS3-201ENST00000368378 COX7CP15954 63 aa6.19□□□□□ -1.42
THBS3-201ENST00000368378 CXCL5P42830 114 aa6.19□□□□□ -1.42
THBS3-201ENST00000368378 FAM222AQ5U5X8 452 aa6.19□□□□□ -1.42
THBS3-201ENST00000368378 ANK3Q12955 4377 aaKnown RBP6.19□□□□□ -1.42
THBS3-201ENST00000368378 TRAV13-2A0A0B4J235 113 aa6.19□□□□□ -1.42
THBS3-201ENST00000368378 FHL2Q14192 279 aa6.19□□□□□ -1.42
THBS3-201ENST00000368378 C16orf74Q96GX8 76 aa6.19□□□□□ -1.42
THBS3-201ENST00000368378 XAGE1AQ9HD64 81 aa6.19□□□□□ -1.42
THBS3-201ENST00000368378 LINC00959A0A1B0GUT2 108 aa6.18□□□□□ -1.42
THBS3-201ENST00000368378 PLAC8L1A1L4L8 177 aa6.18□□□□□ -1.42
THBS3-201ENST00000368378 HILS1P60008 231 aa6.18□□□□□ -1.42
THBS3-201ENST00000368378 LINC01600Q96MT4 127 aa6.18□□□□□ -1.42
THBS3-201ENST00000368378 LINC00846Q9NV44 126 aa6.18□□□□□ -1.42
THBS3-201ENST00000368378 FAM240AA0A1B0GVK7 77 aa6.17□□□□□ -1.42
THBS3-201ENST00000368378 IGHV3OR16-9A0A0B4J2B5 98 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms