RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 IBA57-AS1B1ANH7 110 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 MALP21145 153 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 FXYD2P54710 66 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 UBE2V1Q13404 147 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 PKHD1P08F94 4074 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 C3orf84H3BNL1 204 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 K7EP34 96 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 FAM19A1Q7Z5A9 133 aa3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 OPRPNQ99935 248 aaPredicted RBP3.62□□□□□ -1.83
PRPF4B-201ENST00000337659 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.61□□□□□ -1.83
PRPF4B-201ENST00000337659 TRGV4A0A0C4DH28 118 aa3.61□□□□□ -1.83
PRPF4B-201ENST00000337659 IGKV2-29A2NJV5 120 aaPredicted RBP3.61□□□□□ -1.83
PRPF4B-201ENST00000337659 CDKN2A-AS1Q9UH64 79 aa3.61□□□□□ -1.83
PRPF4B-201ENST00000337659 A0A1W2PPM0 123 aa3.61□□□□□ -1.83
PRPF4B-201ENST00000337659 CFC1BP0CG36 223 aa3.61□□□□□ -1.83
PRPF4B-201ENST00000337659 CFC1P0CG37 223 aa3.61□□□□□ -1.83
PRPF4B-201ENST00000337659 IGLL5B9A064 214 aa3.6□□□□□ -1.83
PRPF4B-201ENST00000337659 G3V4G9 280 aa3.6□□□□□ -1.83
PRPF4B-201ENST00000337659 ENHOQ6UWT2 76 aa3.6□□□□□ -1.83
PRPF4B-201ENST00000337659 C2orf48Q96LS8 159 aa3.6□□□□□ -1.83
PRPF4B-201ENST00000337659 NBEAL1Q6ZS30 2694 aa3.6□□□□□ -1.83
PRPF4B-201ENST00000337659 COPS9Q8WXC6 57 aa3.6□□□□□ -1.83
PRPF4B-201ENST00000337659 GYPEP15421 78 aa3.6□□□□□ -1.83
PRPF4B-201ENST00000337659 DEFB135Q30KP9 77 aa3.6□□□□□ -1.83
PRPF4B-201ENST00000337659 CHCHD5Q9BSY4 110 aa3.6□□□□□ -1.83
PRPF4B-201ENST00000337659 HERC2O95714 4834 aa3.6□□□□□ -1.83
PRPF4B-201ENST00000337659 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.6□□□□□ -1.83
PRPF4B-201ENST00000337659 DNAL4O96015 105 aa3.6□□□□□ -1.83
PRPF4B-201ENST00000337659 GAGE12JA6NER3 117 aa3.59□□□□□ -1.83
PRPF4B-201ENST00000337659 PAX4O43316 350 aa3.59□□□□□ -1.83
PRPF4B-201ENST00000337659 IGHV3-33P01772 117 aa3.59□□□□□ -1.83
PRPF4B-201ENST00000337659 GAGE4Q13068 117 aa3.59□□□□□ -1.83
PRPF4B-201ENST00000337659 GAGE5Q13069 117 aa3.59□□□□□ -1.83
PRPF4B-201ENST00000337659 GAGE13Q4V321 117 aa3.59□□□□□ -1.83
PRPF4B-201ENST00000337659 ADAMTSL4-AS1Q5T5F5 129 aa3.59□□□□□ -1.83
PRPF4B-201ENST00000337659 SDIM1Q6ZPB5 146 aa3.59□□□□□ -1.83
PRPF4B-201ENST00000337659 TRAV10A0A0B4J240 114 aa3.59□□□□□ -1.83
PRPF4B-201ENST00000337659 DAD1P61803 113 aa3.59□□□□□ -1.83
PRPF4B-201ENST00000337659 OBSCN-AS1Q96MR7 158 aa3.59□□□□□ -1.83
PRPF4B-201ENST00000337659 TRBV7-6A0A0J9YX20 115 aa3.59□□□□□ -1.84
PRPF4B-201ENST00000337659 CEMP1Q6PRD7 247 aaPredicted RBP3.59□□□□□ -1.84
PRPF4B-201ENST00000337659 CIRBPQ14011 172 aaKnown RBP3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 NTN5Q8WTR8 489 aaPredicted RBP3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 IGHV3-73A0A0B4J1V6 119 aa3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 TRAV8-6A0A0B4J262 113 aa3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 TRBV10-2A0A0K0K1G8 114 aa3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 SMIM13P0DJ93 91 aa3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 DEFB130BP0DP73 79 aa3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 DEFB130AP0DP74 79 aa3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 OXLD1Q5BKU9 147 aa3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 SOSTDC1Q6X4U4 206 aa3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 COX7B2Q8TF08 81 aa3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 CARD19Q96LW7 228 aa3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 PKD1L1Q8TDX9 2849 aa3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 A0A1B0GX51 115 aa3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 COX6CP09669 75 aa3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 LINC00308Q8TCZ7 52 aa3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 NDUFA12Q9UI09 145 aa3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 APLNQ9ULZ1 77 aa3.58□□□□□ -1.84
PRPF4B-201ENST00000337659 TRBV20-1A0A075B6N2 111 aa3.57□□□□□ -1.84
PRPF4B-201ENST00000337659 RPL28P46779 137 aaKnown RBP3.57□□□□□ -1.84
PRPF4B-201ENST00000337659 WWC2-AS2Q96NR7 200 aa3.57□□□□□ -1.84
PRPF4B-201ENST00000337659 TTTY13Q9BZ97 58 aa3.57□□□□□ -1.84
PRPF4B-201ENST00000337659 PRB2P02812 416 aaPredicted RBP3.57□□□□□ -1.84
PRPF4B-201ENST00000337659 LGALS3P17931 250 aaKnown RBP3.57□□□□□ -1.84
PRPF4B-201ENST00000337659 SLC25A20O43772 301 aa3.57□□□□□ -1.84
PRPF4B-201ENST00000337659 C15orf56Q8N910 161 aa3.57□□□□□ -1.84
PRPF4B-201ENST00000337659 IGKV2-28A0A075B6P5 120 aa3.56□□□□□ -1.84
PRPF4B-201ENST00000337659 IGKV2D-28P01615 120 aa3.56□□□□□ -1.84
PRPF4B-201ENST00000337659 RAB37Q96AX2 223 aa3.56□□□□□ -1.84
PRPF4B-201ENST00000337659 IGHV3-38A0A0C4DH36 116 aa3.56□□□□□ -1.84
PRPF4B-201ENST00000337659 F8W1H4 67 aa3.56□□□□□ -1.84
PRPF4B-201ENST00000337659 A0A0U1RRA0 63 aa3.56□□□□□ -1.84
PRPF4B-201ENST00000337659 K7ERU9 68 aa3.56□□□□□ -1.84
PRPF4B-201ENST00000337659 NANOS2P60321 138 aaKnown RBP3.56□□□□□ -1.84
PRPF4B-201ENST00000337659 C22orf24Q9Y442 160 aa3.56□□□□□ -1.84
PRPF4B-201ENST00000337659 H3BMG7 143 aa3.56□□□□□ -1.84
PRPF4B-201ENST00000337659 SS18Q15532 418 aa3.56□□□□□ -1.84
PRPF4B-201ENST00000337659 ESRGQ1W209 222 aa3.56□□□□□ -1.84
PRPF4B-201ENST00000337659 Q6ZRN7 208 aaPredicted RBP3.56□□□□□ -1.84
PRPF4B-201ENST00000337659 TRAV8-3A0A0A6YYJ7 113 aa3.55□□□□□ -1.84
PRPF4B-201ENST00000337659 CNBPP62633 177 aaKnown RBP3.55□□□□□ -1.84
PRPF4B-201ENST00000337659 REG3AQ06141 175 aa3.55□□□□□ -1.84
PRPF4B-201ENST00000337659 S100A7L2Q5SY68 101 aa3.55□□□□□ -1.84
PRPF4B-201ENST00000337659 Q6ZTC4 211 aa3.55□□□□□ -1.84
PRPF4B-201ENST00000337659 PRO1854Q9UHT4 67 aa3.55□□□□□ -1.84
PRPF4B-201ENST00000337659 MUSTN1Q8IVN3 82 aa3.55□□□□□ -1.84
PRPF4B-201ENST00000337659 COL7A1Q02388 2944 aa3.55□□□□□ -1.84
PRPF4B-201ENST00000337659 F8WEM9 126 aa3.55□□□□□ -1.84
PRPF4B-201ENST00000337659 IGLV6-57P01721 117 aa3.55□□□□□ -1.84
PRPF4B-201ENST00000337659 SPINK8P0C7L1 97 aa3.55□□□□□ -1.84
PRPF4B-201ENST00000337659 TMEM170BQ5T4T1 132 aa3.55□□□□□ -1.84
PRPF4B-201ENST00000337659 MTURNQ8N3F0 131 aa3.54□□□□□ -1.84
PRPF4B-201ENST00000337659 SS18L2Q9UHA2 77 aa3.54□□□□□ -1.84
PRPF4B-201ENST00000337659 SMCPP49901 116 aaPredicted RBP3.54□□□□□ -1.84
PRPF4B-201ENST00000337659 CHCHD10Q8WYQ3 142 aaPredicted RBP3.54□□□□□ -1.84
PRPF4B-201ENST00000337659 LCE6AA0A183 80 aa3.54□□□□□ -1.84
PRPF4B-201ENST00000337659 C11orf45Q8TAV5 145 aa3.54□□□□□ -1.84
PRPF4B-201ENST00000337659 Q5XG85 94 aa3.54□□□□□ -1.84
PRPF4B-201ENST00000337659 DNAH5Q8TE73 4624 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms