RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 Q8N3U1 123 aa9.53□□□□□ -0.88
COL2A1-201ENST00000337299 FAM19A4Q96LR4 140 aa9.53□□□□□ -0.88
COL2A1-201ENST00000337299 PRO0628Q9UI54 55 aa9.53□□□□□ -0.88
COL2A1-201ENST00000337299 CELA1Q9UNI1 258 aa9.53□□□□□ -0.88
COL2A1-201ENST00000337299 ZNF843Q8N446 348 aa9.53□□□□□ -0.88
COL2A1-201ENST00000337299 CAMK2N2Q96S95 79 aa9.53□□□□□ -0.88
COL2A1-201ENST00000337299 COL4A2P08572 1712 aa9.53□□□□□ -0.88
COL2A1-201ENST00000337299 C16orf74Q96GX8 76 aa9.53□□□□□ -0.88
COL2A1-201ENST00000337299 CCL24O00175 119 aa9.53□□□□□ -0.88
COL2A1-201ENST00000337299 NTM-AS1Q6ZSK4 140 aa9.53□□□□□ -0.88
COL2A1-201ENST00000337299 KLK12Q9UKR0 248 aa9.53□□□□□ -0.88
COL2A1-201ENST00000337299 A8MTW9 85 aa9.52□□□□□ -0.89
COL2A1-201ENST00000337299 PDE6GP18545 87 aa9.52□□□□□ -0.89
COL2A1-201ENST00000337299 DMXL2Q8TDJ6 3036 aa9.52□□□□□ -0.89
COL2A1-201ENST00000337299 MAST4O15021 2626 aa9.52□□□□□ -0.89
COL2A1-201ENST00000337299 BRI3O95415 125 aa9.52□□□□□ -0.89
COL2A1-201ENST00000337299 CFAP47Q6ZTR5 3102 aa9.52□□□□□ -0.89
COL2A1-201ENST00000337299 COX7BP24311 80 aa9.51□□□□□ -0.89
COL2A1-201ENST00000337299 C9orf116Q5BN46 136 aaPredicted RBP9.51□□□□□ -0.89
COL2A1-201ENST00000337299 LITAFQ99732 161 aa9.51□□□□□ -0.89
COL2A1-201ENST00000337299 NANOS2P60321 138 aaKnown RBP9.51□□□□□ -0.89
COL2A1-201ENST00000337299 ADGRG4Q8IZF6 3080 aa9.5□□□□□ -0.89
COL2A1-201ENST00000337299 MGAM2Q2M2H8 2515 aa9.5□□□□□ -0.89
COL2A1-201ENST00000337299 ZZEF1O43149 2961 aa9.5□□□□□ -0.89
COL2A1-201ENST00000337299 C18orf65Q6ZTR6 163 aa9.5□□□□□ -0.89
COL2A1-201ENST00000337299 FAM19A3Q7Z5A8 133 aa9.5□□□□□ -0.89
COL2A1-201ENST00000337299 TRBV6-8A0A0A6YYG3 113 aa9.5□□□□□ -0.89
COL2A1-201ENST00000337299 FHL2Q14192 279 aa9.5□□□□□ -0.89
COL2A1-201ENST00000337299 KRTAP10-9P60411 292 aa9.5□□□□□ -0.89
COL2A1-201ENST00000337299 Q8N814 137 aa9.5□□□□□ -0.89
COL2A1-201ENST00000337299 TRBV6-4A0A1B0GX49 114 aa9.49□□□□□ -0.89
COL2A1-201ENST00000337299 NDUFC1O43677 76 aa9.49□□□□□ -0.89
COL2A1-201ENST00000337299 MRPL55Q7Z7F7 128 aaKnown RBP9.49□□□□□ -0.89
COL2A1-201ENST00000337299 ATMQ13315 3056 aa9.49□□□□□ -0.89
COL2A1-201ENST00000337299 AVPP01185 164 aa9.48□□□□□ -0.89
COL2A1-201ENST00000337299 CHCHD10Q8WYQ3 142 aaPredicted RBP9.48□□□□□ -0.89
COL2A1-201ENST00000337299 IGLV4-60A0A075B6I1 120 aa9.48□□□□□ -0.89
COL2A1-201ENST00000337299 TRBV7-6A0A0J9YX20 115 aa9.48□□□□□ -0.89
COL2A1-201ENST00000337299 C1orf158Q8N1D5 194 aa9.48□□□□□ -0.89
COL2A1-201ENST00000337299 HELZ2Q9BYK8 2649 aaKnown RBP9.48□□□□□ -0.89
COL2A1-201ENST00000337299 MP68P56378 58 aa9.48□□□□□ -0.89
COL2A1-201ENST00000337299 DEFB121Q5J5C9 76 aa9.47□□□□□ -0.89
COL2A1-201ENST00000337299 TMEM89A2RUT3 159 aa9.47□□□□□ -0.89
COL2A1-201ENST00000337299 UBE2BP63146 152 aa9.47□□□□□ -0.89
COL2A1-201ENST00000337299 PSPHP1O15172 72 aa9.47□□□□□ -0.89
COL2A1-201ENST00000337299 WFDC10AQ9H1F0 79 aa9.47□□□□□ -0.89
COL2A1-201ENST00000337299 LINC00959A0A1B0GUT2 108 aa9.46□□□□□ -0.89
COL2A1-201ENST00000337299 Q8N9L7 120 aa9.46□□□□□ -0.89
COL2A1-201ENST00000337299 FAM30AQ9NZY2 134 aa9.46□□□□□ -0.89
COL2A1-201ENST00000337299 PCSK5Q92824 1860 aa9.45□□□□□ -0.9
COL2A1-201ENST00000337299 IGKV2D-24A0A075B6R9 120 aa9.45□□□□□ -0.9
COL2A1-201ENST00000337299 DEFB114Q30KQ6 69 aa9.45□□□□□ -0.9
COL2A1-201ENST00000337299 REG3AQ06141 175 aa9.45□□□□□ -0.9
COL2A1-201ENST00000337299 ETDCA0A1B0GVM5 59 aa9.45□□□□□ -0.9
COL2A1-201ENST00000337299 ITPR3Q14573 2671 aa9.44□□□□□ -0.9
COL2A1-201ENST00000337299 SEC61GP60059 68 aa9.44□□□□□ -0.9
COL2A1-201ENST00000337299 Q6ZVQ6 151 aa9.44□□□□□ -0.9
COL2A1-201ENST00000337299 IGLV1-40P01703 118 aa9.44□□□□□ -0.9
COL2A1-201ENST00000337299 LINC01561Q8N1V8 128 aa9.44□□□□□ -0.9
COL2A1-201ENST00000337299 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.44□□□□□ -0.9
COL2A1-201ENST00000337299 BBC3Q96PG8 261 aaPredicted RBP9.44□□□□□ -0.9
COL2A1-201ENST00000337299 FLNAP21333 2647 aaKnown RBP9.44□□□□□ -0.9
COL2A1-201ENST00000337299 LINC01547P58512 204 aaPredicted RBP9.43□□□□□ -0.9
COL2A1-201ENST00000337299 TEP1Q99973 2627 aaKnown RBP9.43□□□□□ -0.9
COL2A1-201ENST00000337299 IGLV5-39A0A0G2JS06 123 aa9.43□□□□□ -0.9
COL2A1-201ENST00000337299 IGHV4-31P0DP07 118 aa9.43□□□□□ -0.9
COL2A1-201ENST00000337299 ATP5EP56381 51 aaPredicted RBP9.43□□□□□ -0.9
COL2A1-201ENST00000337299 LINC00336Q6ZUF6 198 aa9.42□□□□□ -0.9
COL2A1-201ENST00000337299 TMEM254Q8TBM7 123 aa9.42□□□□□ -0.9
COL2A1-201ENST00000337299 PRO0255Q9UI72 69 aa9.42□□□□□ -0.9
COL2A1-201ENST00000337299 A0A087WZ39 114 aa9.41□□□□□ -0.9
COL2A1-201ENST00000337299 ZNF575Q86XF7 245 aa9.41□□□□□ -0.9
COL2A1-201ENST00000337299 LOC400499M0QZD8 3231 aa9.41□□□□□ -0.9
COL2A1-201ENST00000337299 COL12A1Q99715 3063 aa9.41□□□□□ -0.9
COL2A1-201ENST00000337299 DEFB135Q30KP9 77 aa9.41□□□□□ -0.9
COL2A1-201ENST00000337299 RETNQ9HD89 108 aa9.41□□□□□ -0.9
COL2A1-201ENST00000337299 PMAIP1Q13794 54 aa9.4□□□□□ -0.9
COL2A1-201ENST00000337299 NDUFS5O43920 106 aa9.39□□□□□ -0.91
COL2A1-201ENST00000337299 UNQ6190/PRO20217Q6UXQ8 127 aa9.39□□□□□ -0.91
COL2A1-201ENST00000337299 TRAV10A0A0B4J240 114 aa9.39□□□□□ -0.91
COL2A1-201ENST00000337299 DNAJC9-AS1A6NH13 148 aa9.39□□□□□ -0.91
COL2A1-201ENST00000337299 PRYO14603 147 aa9.39□□□□□ -0.91
COL2A1-201ENST00000337299 MUC3AQ02505 3323 aa9.39□□□□□ -0.91
COL2A1-201ENST00000337299 LINC00474Q9P2X8 69 aa9.38□□□□□ -0.91
COL2A1-201ENST00000337299 PLA2G2AP14555 144 aa9.38□□□□□ -0.91
COL2A1-201ENST00000337299 WFDC13Q8IUB5 93 aa9.38□□□□□ -0.91
COL2A1-201ENST00000337299 A0A0J9YWU9 116 aa9.38□□□□□ -0.91
COL2A1-201ENST00000337299 H3BQ85 93 aa9.38□□□□□ -0.91
COL2A1-201ENST00000337299 WFDC10BQ8IUB3 73 aa9.38□□□□□ -0.91
COL2A1-201ENST00000337299 CHKB-CPT1BH3BT56 60 aa9.37□□□□□ -0.91
COL2A1-201ENST00000337299 C9orf129Q5T035 196 aaKnown RBP9.37□□□□□ -0.91
COL2A1-201ENST00000337299 DMXL1Q9Y485 3027 aa9.37□□□□□ -0.91
COL2A1-201ENST00000337299 IGKV2-28A0A075B6P5 120 aa9.37□□□□□ -0.91
COL2A1-201ENST00000337299 IGKV2D-28P01615 120 aa9.37□□□□□ -0.91
COL2A1-201ENST00000337299 FLNCQ14315 2725 aa9.37□□□□□ -0.91
COL2A1-201ENST00000337299 KALRNO60229 2985 aa9.36□□□□□ -0.91
COL2A1-201ENST00000337299 TNRC18O15417 2968 aaPredicted RBP9.36□□□□□ -0.91
COL2A1-201ENST00000337299 Q6YL49 198 aa9.36□□□□□ -0.91
COL2A1-201ENST00000337299 C4orf3Q8WVX3 66 aa9.36□□□□□ -0.91
COL2A1-201ENST00000337299 USP34Q70CQ2 3546 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms