RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 REG3AQ06141 175 aa6.28□□□□□ -1.4
PDPN-201ENST00000294489 LINC01561Q8N1V8 128 aa6.28□□□□□ -1.4
PDPN-201ENST00000294489 A0A0J9YWU9 116 aa6.27□□□□□ -1.41
PDPN-201ENST00000294489 C6orf226Q5I0X4 101 aa6.27□□□□□ -1.41
PDPN-201ENST00000294489 CD164L2Q6UWJ8 174 aa6.27□□□□□ -1.41
PDPN-201ENST00000294489 MTURNQ8N3F0 131 aa6.27□□□□□ -1.41
PDPN-201ENST00000294489 HUWE1Q7Z6Z7 4374 aaKnown RBP6.26□□□□□ -1.41
PDPN-201ENST00000294489 Q6ZTC4 211 aa6.26□□□□□ -1.41
PDPN-201ENST00000294489 PRB2P02812 416 aaPredicted RBP6.25□□□□□ -1.41
PDPN-201ENST00000294489 LYPD5Q6UWN5 251 aa6.25□□□□□ -1.41
PDPN-201ENST00000294489 CHCHD10Q8WYQ3 142 aaPredicted RBP6.25□□□□□ -1.41
PDPN-201ENST00000294489 PPDPFQ9H3Y8 114 aa6.25□□□□□ -1.41
PDPN-201ENST00000294489 TRBV30A0A0K0K1B3 111 aa6.25□□□□□ -1.41
PDPN-201ENST00000294489 IBA57-AS1B1ANH7 110 aa6.25□□□□□ -1.41
PDPN-201ENST00000294489 COX7A2LO14548 114 aa6.25□□□□□ -1.41
PDPN-201ENST00000294489 TCL1BO95988 128 aa6.25□□□□□ -1.41
PDPN-201ENST00000294489 COX6CP09669 75 aa6.25□□□□□ -1.41
PDPN-201ENST00000294489 Q8IZM0 81 aa6.25□□□□□ -1.41
PDPN-201ENST00000294489 LINC00158P58513 81 aa6.25□□□□□ -1.41
PDPN-201ENST00000294489 WFDC2Q14508 124 aa6.25□□□□□ -1.41
PDPN-201ENST00000294489 Q8N3U1 123 aa6.25□□□□□ -1.41
PDPN-201ENST00000294489 SIGMAR1Q99720 223 aa6.25□□□□□ -1.41
PDPN-201ENST00000294489 IGLV10-54A0A075B6I4 117 aa6.24□□□□□ -1.41
PDPN-201ENST00000294489 MALP21145 153 aa6.24□□□□□ -1.41
PDPN-201ENST00000294489 C11orf45Q8TAV5 145 aa6.24□□□□□ -1.41
PDPN-201ENST00000294489 RPL13AP40429 203 aaKnown RBP6.24□□□□□ -1.41
PDPN-201ENST00000294489 SEC61GP60059 68 aa6.24□□□□□ -1.41
PDPN-201ENST00000294489 SOSTDC1Q6X4U4 206 aa6.24□□□□□ -1.41
PDPN-201ENST00000294489 MIR7-3HGQ8N6C7 128 aa6.24□□□□□ -1.41
PDPN-201ENST00000294489 PRO0461Q9UI25 63 aa6.24□□□□□ -1.41
PDPN-201ENST00000294489 NANOS2P60321 138 aaKnown RBP6.23□□□□□ -1.41
PDPN-201ENST00000294489 C1orf43Q9BWL3 253 aa6.23□□□□□ -1.41
PDPN-201ENST00000294489 KLK12Q9UKR0 248 aa6.23□□□□□ -1.41
PDPN-201ENST00000294489 DEFB131BA0A096LNP1 70 aa6.23□□□□□ -1.41
PDPN-201ENST00000294489 TRIAP1O43715 76 aa6.23□□□□□ -1.41
PDPN-201ENST00000294489 PFN2P35080 140 aa6.22□□□□□ -1.41
PDPN-201ENST00000294489 CXCL5P42830 114 aa6.22□□□□□ -1.41
PDPN-201ENST00000294489 ATXN8Q156A1 80 aa6.22□□□□□ -1.41
PDPN-201ENST00000294489 KRTAP21-3Q3LHN1 58 aa6.22□□□□□ -1.41
PDPN-201ENST00000294489 PRR34Q9NV39 138 aa6.22□□□□□ -1.41
PDPN-201ENST00000294489 TENM3Q9P273 2699 aa6.22□□□□□ -1.41
PDPN-201ENST00000294489 CRPP02741 224 aa6.22□□□□□ -1.41
PDPN-201ENST00000294489 ETDBQ3ZM63 59 aa6.22□□□□□ -1.41
PDPN-201ENST00000294489 B5MCH6 92 aa6.21□□□□□ -1.42
PDPN-201ENST00000294489 FOXI1Q12951 378 aa6.21□□□□□ -1.42
PDPN-201ENST00000294489 DEFB121Q5J5C9 76 aa6.21□□□□□ -1.42
PDPN-201ENST00000294489 SND1-IT1Q9HBX3 110 aa6.21□□□□□ -1.42
PDPN-201ENST00000294489 GAGE12HA6NDE8 117 aa6.21□□□□□ -1.42
PDPN-201ENST00000294489 J3QR89 54 aa6.21□□□□□ -1.42
PDPN-201ENST00000294489 B9D2Q9BPU9 175 aa6.21□□□□□ -1.42
PDPN-201ENST00000294489 NBEAL1Q6ZS30 2694 aa6.21□□□□□ -1.42
PDPN-201ENST00000294489 DNAH9Q9NYC9 4486 aa6.2□□□□□ -1.42
PDPN-201ENST00000294489 TRAV13-2A0A0B4J235 113 aa6.2□□□□□ -1.42
PDPN-201ENST00000294489 TRAV10A0A0B4J240 114 aa6.2□□□□□ -1.42
PDPN-201ENST00000294489 TRAV8-4A0A0B4J246 113 aa6.2□□□□□ -1.42
PDPN-201ENST00000294489 C2orf82Q6UX34 121 aa6.2□□□□□ -1.42
PDPN-201ENST00000294489 UBE2WQ96B02 151 aa6.2□□□□□ -1.42
PDPN-201ENST00000294489 KIAA0087Q14695 138 aa6.19□□□□□ -1.42
PDPN-201ENST00000294489 ENHOQ6UWT2 76 aa6.19□□□□□ -1.42
PDPN-201ENST00000294489 WFDC10BQ8IUB3 73 aa6.19□□□□□ -1.42
PDPN-201ENST00000294489 C9JAW5 83 aa6.19□□□□□ -1.42
PDPN-201ENST00000294489 SMCPP49901 116 aaPredicted RBP6.19□□□□□ -1.42
PDPN-201ENST00000294489 CCL18P55774 89 aa6.19□□□□□ -1.42
PDPN-201ENST00000294489 KLK5Q9Y337 293 aaPredicted RBP6.19□□□□□ -1.42
PDPN-201ENST00000294489 COX17Q14061 63 aa6.19□□□□□ -1.42
PDPN-201ENST00000294489 ESRGQ1W209 222 aa6.19□□□□□ -1.42
PDPN-201ENST00000294489 MRAPQ8TCY5 172 aa6.19□□□□□ -1.42
PDPN-201ENST00000294489 SLC25A20O43772 301 aa6.18□□□□□ -1.42
PDPN-201ENST00000294489 LINC01620Q4KN68 170 aa6.18□□□□□ -1.42
PDPN-201ENST00000294489 C15orf53Q8NAA6 179 aa6.18□□□□□ -1.42
PDPN-201ENST00000294489 DYNC2H1Q8NCM8 4307 aaKnown RBP6.18□□□□□ -1.42
PDPN-201ENST00000294489 SPAG11BQ08648 103 aa6.18□□□□□ -1.42
PDPN-201ENST00000294489 NOTCH1P46531 2555 aa6.17□□□□□ -1.42
PDPN-201ENST00000294489 TEN1Q86WV5 123 aa6.17□□□□□ -1.42
PDPN-201ENST00000294489 LST1O00453 97 aa6.16□□□□□ -1.42
PDPN-201ENST00000294489 IGKV2-28A0A075B6P5 120 aa6.16□□□□□ -1.42
PDPN-201ENST00000294489 IGKV2D-28P01615 120 aa6.16□□□□□ -1.42
PDPN-201ENST00000294489 CLEC2BQ92478 149 aa6.16□□□□□ -1.42
PDPN-201ENST00000294489 TRBV10-2A0A0K0K1G8 114 aa6.16□□□□□ -1.42
PDPN-201ENST00000294489 ANKRD29Q8N6D5 301 aa6.16□□□□□ -1.42
PDPN-201ENST00000294489 LINC00337Q8N6G1 96 aa6.16□□□□□ -1.42
PDPN-201ENST00000294489 NHLRC4P0CG21 123 aaPredicted RBP6.15□□□□□ -1.42
PDPN-201ENST00000294489 LINC01556Q5JQF7 62 aa6.15□□□□□ -1.42
PDPN-201ENST00000294489 COL7A1Q02388 2944 aa6.15□□□□□ -1.43
PDPN-201ENST00000294489 RPL28P46779 137 aaKnown RBP6.14□□□□□ -1.43
PDPN-201ENST00000294489 MUC7Q8TAX7 377 aa6.14□□□□□ -1.43
PDPN-201ENST00000294489 PPDPFLQ8WWR9 84 aa6.14□□□□□ -1.43
PDPN-201ENST00000294489 DNAH10OSP0CZ25 163 aa6.14□□□□□ -1.43
PDPN-201ENST00000294489 KRTAP26-1Q6PEX3 210 aa6.14□□□□□ -1.43
PDPN-201ENST00000294489 OR13C6PQ8NH95 151 aa6.14□□□□□ -1.43
PDPN-201ENST00000294489 UNQ6190/PRO20217Q6UXQ8 127 aa6.14□□□□□ -1.43
PDPN-201ENST00000294489 C6orf223Q8N319 242 aa6.14□□□□□ -1.43
PDPN-201ENST00000294489 H3BT86 120 aa6.13□□□□□ -1.43
PDPN-201ENST00000294489 C9orf116Q5BN46 136 aaPredicted RBP6.13□□□□□ -1.43
PDPN-201ENST00000294489 UPK3BQ9BT76 320 aa6.13□□□□□ -1.43
PDPN-201ENST00000294489 ZNF561-AS1K7EIQ3 104 aa6.13□□□□□ -1.43
PDPN-201ENST00000294489 LINC01600Q96MT4 127 aa6.13□□□□□ -1.43
PDPN-201ENST00000294489 NDUFC2O95298 119 aa6.12□□□□□ -1.43
PDPN-201ENST00000294489 LINC00526Q96FQ7 95 aa6.12□□□□□ -1.43
PDPN-201ENST00000294489 MGAM2Q2M2H8 2515 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms