RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 CicQ924A2 2510 aa17.75■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Trav13n-4A0A0G2JG01 110 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Gm21616B6ZB74 166 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Olfr609E9Q4X7 319 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Il3raP26952 396 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Ypel3P61237 119 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 HrkP62816 92 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Rph3alQ768S4 302 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Minos1Q7TNS2 76 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Klk10Q99M20 278 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Q9CX25 107 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Vmn1r46Q9EQ45 309 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Olfr1436A0PK57 315 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Gm5129F6YHA9 99 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Ang3P97802 145 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Siah2Q06986 325 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Fam206aQ80ZQ9 193 aaKnown RBP17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Gm9945Q8BNZ3 91 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 D630044L22RikQ8C701 164 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Rab5aQ9CQD1 215 aa17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Btf3l4Q9CQH7 158 aaKnown RBP17.74■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Trbv31A0A075B5J5 111 aa17.73■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Scgb1b12A0A087WP21 93 aa17.73■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Gm37388A0A0A6YY46 143 aa17.73■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Olfr779E9PUS9 130 aa17.73■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Trav2Q5R1I9 109 aa17.73■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Ccl12Q62401 104 aa17.73■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Cd52Q64389 74 aa17.73■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Slc25a29Q8BL03 306 aa17.73■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Olfr968Q8VFN4 314 aa17.73■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Tbx19Q99ME7 446 aa17.73■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Atp6v0e1Q9CQD8 81 aa17.73■□□□□ 0.43
Scn1b-201ENSMUST00000098548 SelenofQ9ERR7 162 aa17.73■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Gm27027S4R1M6 97 aa17.73■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Setd2E9Q5F9 2537 aa17.73■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Ighv5-16A0A0B4J1P4 117 aa17.72■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Gm44501A8R0T9 150 aa17.72■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Psg18B2RSG7 476 aa17.72■□□□□ 0.43
Scn1b-201ENSMUST00000098548 P01748 117 aa17.72■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Timp3P39876 211 aa17.72■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Rplp1P47955 114 aa17.72■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Cd200r3Q5UKY4 296 aa17.72■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Saxo2Q8BQB6 394 aa17.72■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Higd1bQ99JY6 98 aa17.72■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Mrps11Q9DCA2 191 aaKnown RBP17.72■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Ctnnbip1Q9JJN6 81 aa17.72■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Zfp36l1P23950 338 aa17.71■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Olfr149Q60888 311 aa17.71■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Rasl11aQ6IMB1 242 aa17.71■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Gm10190Q8BSD7 107 aa17.71■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Ythdf2Q91YT7 579 aaKnown RBP17.71■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Mettl26Q9DCS2 204 aa17.71■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Muc4Q8JZM8 3443 aa17.71■□□□□ 0.43
Scn1b-201ENSMUST00000098548 Gm15140A2BEE3 237 aa17.7■□□□□ 0.42
Scn1b-201ENSMUST00000098548 4930444P10RikD3YUR1 185 aa17.7■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Gm3233E9Q2H5 230 aa17.7■□□□□ 0.42
Scn1b-201ENSMUST00000098548 1700056E22RikF7CNM6 234 aa17.7■□□□□ 0.42
Scn1b-201ENSMUST00000098548 P01674 108 aa17.7■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Myod1P10085 318 aa17.7■□□□□ 0.42
Scn1b-201ENSMUST00000098548 NdpP48744 131 aa17.7■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Oosp2Q4FZG8 168 aa17.7■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Olfr433Q7TRV9 314 aa17.7■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Lypd1Q8BLC3 141 aa17.7■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Gm10309Q8C648 119 aa17.7■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Atoh7Q9Z2E5 149 aa17.7■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Cited2O35740 269 aa17.7■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Rpp30O88796 268 aaKnown RBP17.7■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Zim1Q8C393 579 aa17.7■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Olfr1199Q8VF94 310 aa17.7■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Nus1Q99LJ8 297 aa17.7■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Ighv7-3A0A075B5R2 120 aa17.69■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Ighv1-77A0A0G2JGS9 117 aa17.69■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Hmx3P42581 356 aa17.69■□□□□ 0.42
Scn1b-201ENSMUST00000098548 BlcapP62951 87 aa17.69■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Crebl2Q32M00 123 aa17.69■□□□□ 0.42
Scn1b-201ENSMUST00000098548 C1ql4Q4ZJM9 238 aa17.69■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Ypel4Q65Z93 127 aa17.69■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Adat3Q6PAT0 349 aa17.69■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Kcnip4Q6PHZ8 250 aa17.69■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Habp2Q8K0D2 558 aa17.69■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Gm4744D3Z3S5 154 aa17.68■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Rnf212F6TQD1 307 aa17.68■□□□□ 0.42
Scn1b-201ENSMUST00000098548 P01789 122 aa17.68■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Khdc1bP0C7A0 126 aa17.68■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Adrb3P25962 400 aa17.68■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Slc36a4Q8CH36 500 aa17.68■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Oxld1Q9CR10 201 aa17.68■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Fbxo25Q9D2Y6 357 aa17.68■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Vmn1r61W4VSP5 300 aa17.68■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Olfr1118A0A0J9YUE7 307 aa17.67■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Zfp931A2AHM2 298 aa17.67■□□□□ 0.42
Scn1b-201ENSMUST00000098548 P01801 115 aa17.67■□□□□ 0.42
Scn1b-201ENSMUST00000098548 P01802 115 aa17.67■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Fabp6P51162 128 aa17.67■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Sumo1P63166 101 aaKnown RBP17.67■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Crisp3Q03402 241 aa17.67■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Hist1h1tQ07133 208 aa17.67■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Pilrb2Q2YFS1 225 aa17.67■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Atp6v0bQ91V37 205 aa17.67■□□□□ 0.42
Scn1b-201ENSMUST00000098548 Ccdc198Q9CPZ1 294 aa17.67■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms