RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Wipf3P0C7L0 485 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 BC106179Q8C9L1 186 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Timm21Q8CCM6 249 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 GrhprQ91Z53 328 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Cxcl14Q9WUQ5 99 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Plxna3P70208 1872 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 P01812 117 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Trav2Q5R1I9 109 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Gm20854Q62461 227 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Tmem8bB1AWJ5 472 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Defb30Q30KN4 75 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Megf10Q6DIB5 1147 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Cphx2Q8BX39 182 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Klf11Q8K1S5 502 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Q91WE4 72 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Stpg1Q9D2F5 341 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 EsdQ9R0P3 282 aa9.97□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Tcrg-V4A0A0B4J1J8 138 aa9.96□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Gm5148Q8BGG2 154 aa9.96□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Immp2lQ8BPT6 175 aa9.96□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Cdk2ap2Q9CPY4 127 aa9.96□□□□□ -0.81
Col8a1-201ENSMUST00000089332 MNCb-2875Q9DCB3 74 aa9.96□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Col13a1Q9R1N9 751 aa9.96□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Frem1Q684R7 2191 aa9.96□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Trav6-4A0A075B6B4 115 aa9.96□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Trav19A0A0B4J1K4 119 aa9.96□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Loxl2P58022 776 aa9.96□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Gm10912Q3UXH0 145 aa9.96□□□□□ -0.81
Col8a1-201ENSMUST00000089332 PtprfA2A8L5 1898 aa9.96□□□□□ -0.81
Col8a1-201ENSMUST00000089332 Slc25a47Q6IS41 310 aa9.96□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Gm45861A0A1B0GRY3 1923 aa9.96□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Ighv5-12-4A0A0A6YWG4 117 aa9.96□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Klf12O35738 402 aa9.96□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Q3UNZ8 350 aa9.96□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Igkv4-80A0A075B5L7 116 aa9.95□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Mllt11P97783 90 aa9.95□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Fgf16Q9ESL8 207 aa9.95□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Srsf1Q6PDM2 248 aaKnown RBP9.95□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Ormdl2Q9CQZ0 153 aa9.95□□□□□ -0.82
Col8a1-201ENSMUST00000089332 5930422O12RikQ8C4Y4 123 aa9.95□□□□□ -0.82
Col8a1-201ENSMUST00000089332 CompQ9R0G6 755 aa9.95□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Igkv13-84A0A140T8N3 115 aa9.95□□□□□ -0.82
Col8a1-201ENSMUST00000089332 RetnQ99P87 114 aa9.95□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Plxnd1Q3UH93 1925 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Ighv14-1A0A075B5R4 117 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 B1ARW8 110 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Mrpl27Q99N92 148 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Myo7bQ99MZ6 2113 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Dock4P59764 1978 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 A0A1L1SR50 188 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Gm7849D3YX03 116 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 PlnP61014 52 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Tmem136Q3TYE7 245 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Rnf138Q9CQE0 245 aaKnown RBP9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Trdv1A0A075B657 112 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Sap30O88574 220 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Edn3P48299 214 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Supt4h1aP63271 117 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 NrepQ07475 68 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 C1qtnf5Q8K479 243 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 TirapQ99JY1 241 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 St6galnac6Q9JM95 333 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Nup210lQ9D2F7 1881 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Trav3-3Q5R1C3 114 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 A730015C16RikQ8C992 119 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 3110018I06RikQ9CXS0 120 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Tmem170aQ9D342 144 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Wdr81Q5ND34 1934 aa9.94□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Ang6Q5GAN0 147 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Gm5868Q8BJG1 145 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Rnase6Q9D244 153 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Lyzl4Q9D925 145 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Igkv14-111A0A140T8P9 117 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 P01680 129 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Fbxl7Q5BJ29 491 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Prss22Q9ER10 306 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Pmaip1Q9JM54 103 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Trdv2-1A0A0G2JGB9 116 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Zfp72Q0VFY0 435 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Tmem241Q3UME2 297 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Hils1Q9QYL0 170 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Ovol1Q9WTJ2 267 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Med12lQ8BQM9 2157 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Olfr779E9PUS9 130 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 SbpP15501 199 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Shisal1Q0VBP7 198 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Gng7Q61016 68 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Q8BTC1 67 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Pygo1Q9D0P5 417 aa9.93□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Gm12830F6XVH0 157 aa9.92□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Ear14F6YUX7 155 aa9.92□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Zfp27P10077 819 aa9.92□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Nrn1Q8CFV4 142 aa9.92□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Gm7489Q3UT34 171 aa9.92□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Gm4763Q8CFJ5 196 aa9.92□□□□□ -0.82
Col8a1-201ENSMUST00000089332 ArtnQ9Z0L2 224 aa9.92□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Dock7Q8R1A4 2130 aaKnown RBP9.92□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Lypd1Q8BLC3 141 aa9.92□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Ighv3-4A0A0A6YXF1 117 aa9.92□□□□□ -0.82
Col8a1-201ENSMUST00000089332 Ighv1-18A0A0A6YXN4 117 aa9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 56.6 ms