RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Trav7d-3Q5R1I1 112 aa11.54□□□□□ -0.56
Col3a1-201ENSMUST00000087883 4931428L18RikQ9D4S9 127 aa11.54□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Ttc6G3UYY4 1857 aa11.53□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Tmem238A9JSM3 176 aa11.53□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Znhit3Q9CQK1 151 aa11.53□□□□□ -0.56
Col3a1-201ENSMUST00000087883 CenpvQ9CXS4 252 aa11.53□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Gm17660B9UIU9 90 aa11.53□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Iglc2P01844 104 aa11.53□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Ighv1-22A0A075B5U7 117 aa11.53□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Trbv12-1A0A0B4J1H0 124 aa11.53□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Trbv12-2A0A0B4J1H1 124 aa11.53□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Igkv6-14A0A140T8P1 115 aa11.53□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Q9CQM1 111 aa11.53□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Higd1aQ9JLR9 95 aa11.53□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Defb33Q30KN3 62 aa11.53□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Lrcol1Q3URS3 161 aa11.53□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Mcrip2Q9CQB2 160 aaKnown RBP11.53□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Ssbp2Q9CYZ8 361 aa11.53□□□□□ -0.56
Col3a1-201ENSMUST00000087883 PerpQ9JK95 193 aa11.53□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Gm10203F6QJ09 66 aa11.52□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Pax1P09084 446 aa11.52□□□□□ -0.56
Col3a1-201ENSMUST00000087883 PigyP0C1P0 71 aa11.52□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Pex7P97865 318 aa11.52□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Q8BG31 207 aa11.52□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Mrpl32Q9DCI9 187 aaKnown RBP11.52□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Trdv1A0A075B657 112 aa11.52□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Zfp27P10077 819 aa11.52□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Cox7a2lQ61387 111 aa11.52□□□□□ -0.56
Col3a1-201ENSMUST00000087883 OtorQ9JIE3 128 aa11.52□□□□□ -0.56
Col3a1-201ENSMUST00000087883 Zgrf1Q0VGT4 1863 aa11.52□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Hist1h1tQ07133 208 aa11.52□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Gm10767Q3TQP0 103 aa11.52□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Mgst3Q9CPU4 153 aa11.52□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Plac1Q9JI83 173 aa11.52□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Zcchc24B2RVL6 241 aaKnown RBP11.52□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Efna4O08542 206 aa11.52□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Dph3Q8K0W9 82 aa11.52□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Immp1lQ9CQU8 166 aa11.52□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Gm29423A0A087WRM1 55 aa11.52□□□□□ -0.57
Col3a1-201ENSMUST00000087883 SprnQ8BWU1 147 aa11.52□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Gm10306Q9CUK2 115 aa11.52□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Timm23Q9WTQ8 209 aa11.52□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Ighv1-37A0A0A6YW32 117 aa11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Foxi3E0CZH3 425 aa11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Olfr748E9Q9Z0 307 aa11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Hist1h4aP62806 103 aaKnown RBP11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Jsrp1Q3MI48 332 aa11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Slc25a39Q9D8K8 359 aa11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Col4a3Q9QZS0 1669 aa11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Gm19345G3UYD9 124 aa11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Gm10912Q3UXH0 145 aa11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Atp23Q9CWQ3 201 aa11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Zswim8Q3UHH1 1832 aaKnown RBP11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Ighv1-7A0A075B5T7 117 aa11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Tmem8bB1AWJ5 472 aa11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Lynx1P0DP60 116 aa11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 8030423J24RikQ9CX45 142 aa11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Gm10020E9QAZ2 204 aa11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 P01638 115 aa11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 LtbP41155 306 aa11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Olfr745Q7TRL9 328 aa11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Rpl15Q9CZM2 204 aaKnown RBP11.51□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Cacna1bO55017 2327 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Scn5aQ9JJV9 2019 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Igkv14-130A0A0G2JF45 117 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Obox1Q9D350 204 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 P18532 116 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 4930596D02RikQ3V0H9 216 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 TirapQ99JY1 241 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Rnf125Q9D9R0 233 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Egr1P08046 533 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Cdkn1aP39689 159 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 AgerQ62151 402 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Sfta2E9PXB6 77 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Tm4sf19E9Q9H8 206 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 PolP10400 120 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 SlpiP97430 131 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Q4KKZ1 196 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Fam168aQ8BGZ2 244 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Tex48Q9DA81 110 aa11.5□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Gm26727M0QWT1 121 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Igfbpl1Q80W15 270 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Gm26938S4R185 226 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Zfp11P10751 647 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Saa4P31532 130 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Fxyd7P59648 80 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Tmem89Q9DA04 169 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Heatr5bQ8C547 2070 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Igkv4-70A0A0B4J1I5 116 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Gpx1P11352 201 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Cox8bP48772 70 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Trav7-2Q5R1I3 112 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 SlaQ60898 281 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 BmperQ8CJ69 685 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Cd99Q8VCN6 175 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Tomm7Q9D173 55 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Fbln5Q9WVH9 448 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 P01657 111 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Fgf4P11403 202 aa11.49□□□□□ -0.57
Col3a1-201ENSMUST00000087883 Gm10803Q3TZS6 135 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 52.7 ms