RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 QrfpQ8CE23 124 aa13.62□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Rasl11bQ922H7 247 aa13.62□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Tmem219Q9D123 240 aa13.62□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Ighv14-3A0A075B5R9 117 aa13.62□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Trav12-3A0A075B648 115 aa13.62□□□□□ -0.23
Col17a1-202ENSMUST00000086923 E030025P04RikA2A6V5 185 aa13.62□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Chchd2Q9D1L0 153 aa13.62□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Obox1Q9D350 204 aa13.62□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Slc25a39Q9D8K8 359 aa13.62□□□□□ -0.23
Col17a1-202ENSMUST00000086923 EppinQ9DA01 134 aa13.62□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Igkv4-90A0A075B5L3 117 aa13.61□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Gm10020E9QAZ2 204 aa13.61□□□□□ -0.23
Col17a1-202ENSMUST00000086923 9130213A22RikQ3V3T2 120 aa13.61□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Rpl15Q9CZM2 204 aaKnown RBP13.61□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Frmpd3A0A140LIW3 1774 aa13.61□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Taf1Q80UV9 1891 aa13.61□□□□□ -0.23
Col17a1-202ENSMUST00000086923 P01759 136 aa13.61□□□□□ -0.23
Col17a1-202ENSMUST00000086923 P18528 98 aa13.61□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Nhlrc1Q8BR37 401 aa13.61□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Rita1Q9D1H0 253 aa13.61□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Dctn5Q9QZB9 182 aa13.61□□□□□ -0.23
Col17a1-202ENSMUST00000086923 GhrhP16043 103 aa13.61□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Tnrc6cQ3UHC0 1690 aaKnown RBP13.61□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Ccl25O35903 144 aa13.61□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Q9DAS2 200 aa13.61□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Marf1Q8BJ34 1730 aaKnown RBP13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Trav6n-6A0A075B6B2 114 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Zfp646Q6NV66 1788 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Eid2bE9Q2Y0 151 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Tal2Q62282 108 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Sp9Q64HY3 484 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 BB014433Q8C5R5 389 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Ly6g5bQ8K1T4 194 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Gm9733Q1AN91 178 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Prima1Q810F0 153 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Znrf1Q91V17 227 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Vgll4Q80V24 287 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 B230307C23RikQ8BLB2 64 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Tomm40Q9QYA2 361 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Thsd7aQ69ZU6 1645 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Ighv6-7A0A0A6YWU3 119 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 9830107B12RikD3Z5D6 160 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Rnase2bO35292 155 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 P01811 117 aa13.6□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Clec5aQ9R007 190 aa13.59□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Olfr745Q7TRL9 328 aa13.59□□□□□ -0.23
Col17a1-202ENSMUST00000086923 C1qtnf5Q8K479 243 aa13.59□□□□□ -0.23
Col17a1-202ENSMUST00000086923 P18526 117 aa13.59□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Slc25a29Q8BL03 306 aa13.59□□□□□ -0.23
Col17a1-202ENSMUST00000086923 FAM186AQ9D9R9 1790 aa13.59□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Cacna1bO55017 2327 aa13.59□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Ighv9-3A0A0B4J1J5 117 aa13.59□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Csrp2P97314 193 aaKnown RBP13.59□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Dmrtc1c1Q9D410 238 aa13.59□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Trav4-4-dv10A0A075B651 110 aa13.58□□□□□ -0.23
Col17a1-202ENSMUST00000086923 NrtnP97463 195 aa13.58□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Q80X32 188 aaKnown RBP13.58□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Mzt1Q8BUR9 78 aa13.58□□□□□ -0.23
Col17a1-202ENSMUST00000086923 Id3P41133 119 aa13.58□□□□□ -0.24
Col17a1-202ENSMUST00000086923 NdpP48744 131 aa13.58□□□□□ -0.24
Col17a1-202ENSMUST00000086923 NracQ8BNX7 165 aa13.58□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Pnrc2Q9CR73 140 aa13.58□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Igkv6-25A0A140T8N7 115 aa13.58□□□□□ -0.24
Col17a1-202ENSMUST00000086923 P01637 128 aa13.58□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Wbp1P97764 304 aa13.58□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Tff3Q62395 81 aa13.58□□□□□ -0.24
Col17a1-202ENSMUST00000086923 SpinklQ8CEK3 90 aa13.58□□□□□ -0.24
Col17a1-202ENSMUST00000086923 4930412O13RikQ9D5M9 106 aa13.58□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Dock10Q8BZN6 2150 aa13.58□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Tcrg-C3L7N479 172 aa13.58□□□□□ -0.24
Col17a1-202ENSMUST00000086923 P03985 172 aa13.58□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Q8VC23 124 aa13.58□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Gm20379A0A087WR34 119 aa13.57□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Ttc9cQ810A3 171 aa13.57□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Tnrc6aQ3UHK8 1896 aaKnown RBP13.57□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Zfp976E9Q981 636 aa13.57□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Sh2d1bO35324 132 aa13.57□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Znf691Q3TDE8 283 aa13.57□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Znhit1Q8R331 154 aa13.57□□□□□ -0.24
Col17a1-202ENSMUST00000086923 LenepQ9WVB6 61 aa13.57□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Ascl5M0QWB7 188 aa13.57□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Zc2hc1aQ8BJH1 324 aa13.57□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Gm28778A0A087WSK7 233 aa13.57□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Gpbar1Q80SS6 329 aa13.57□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Timm23Q9WTQ8 209 aa13.56□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Srsf7Q8BL97 267 aaKnown RBP13.56□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Mrpl53Q9D1H8 118 aaKnown RBP13.56□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Ighv14-1A0A075B5R4 117 aa13.56□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Gm17732E9Q5I2 61 aa13.56□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Gm2174F6ZVF2 133 aa13.56□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Gm11110Q3U4K9 109 aa13.56□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Znf22Q9ERU3 237 aa13.56□□□□□ -0.24
Col17a1-202ENSMUST00000086923 MalO09198 153 aa13.56□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Slc25a16Q8C0K5 332 aa13.56□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Vopp1Q8R1C3 172 aa13.56□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Higd1aQ9JLR9 95 aa13.56□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Lbhd2G3UW55 114 aa13.55□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Smr2O09133 150 aa13.55□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Rpl32-psP17932 135 aa13.55□□□□□ -0.24
Col17a1-202ENSMUST00000086923 Gm10188Q3V432 135 aa13.55□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms