RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Gnb1lQ9EQ15 326 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Ovol1Q9WTJ2 267 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Plxna1P70206 1894 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Zfp648D3Z0W3 525 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Foxf2O54743 446 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 P04946 108 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Psg25Q497W1 475 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Dicer1Q8R418 1916 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Tm4sf19E9Q9H8 206 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Wnt2P21552 360 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Pla2g5P97391 137 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Olfr33Q8VGX7 318 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Plekhb2Q9QZC7 221 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Gm35549A0A0N4SUS7 141 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 TcraP01849 138 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 4930596D02RikQ3V0H9 216 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Foxs1Q61574 329 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Olfr1402Q8VET1 320 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Lamtor2Q9JHS3 125 aa12.14□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Ckap5A2AGT5 2032 aaKnown RBP12.13□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Ighv1-26A0A075B5V0 117 aa12.13□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Ube2d2bQ6ZWY6 147 aa12.13□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Olfr748E9Q9Z0 307 aa12.13□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Gm10203F6QJ09 66 aa12.13□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Crim1Q9JLL0 1037 aa12.13□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 A730015C16RikQ8C992 119 aa12.13□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 TprF6ZDS4 2431 aaKnown RBP12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Q4KKZ1 196 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Snx22Q8C084 192 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Il19Q8CJ70 176 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 AY761184Q9D848 116 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Igkv6-23A0A140T8N5 115 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Olfr1367Q8VFG2 316 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Ralgapa1Q6GYP7 2035 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Kif26bQ7TNC6 2112 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Gm7489Q3UT34 171 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Foxg1Q60987 481 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Phpt1Q9DAK9 124 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Cd5lQ9QWK4 352 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Col4a5Q63ZW6 1691 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Trbv12-2A0A0B4J1H1 124 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Znf431E9QAG8 526 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 AdipoqQ60994 247 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Zg16Q8K0C5 167 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Cend1Q9JKC6 149 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Higd1aQ9JLR9 95 aa12.12□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Tmem238A9JSM3 176 aa12.11□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Gm94Q3V2D2 93 aa12.11□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Q9D8L0 127 aa12.11□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Slamf6Q9ET39 351 aa12.11□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Ighv1-36A0A0A6YXT2 117 aa12.11□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Cpsf4lE9Q2N0 280 aa12.11□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Zfp36P22893 319 aaKnown RBP12.11□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Svs5P30933 122 aa12.11□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Dmrt3Q80WT2 476 aa12.11□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 4931428L18RikQ9D4S9 127 aa12.11□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Mrps11Q9DCA2 191 aaKnown RBP12.11□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Lyzl1Q9CPX3 148 aa12.11□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Hils1Q9QYL0 170 aa12.1□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Ighv14-1A0A075B5R4 117 aa12.1□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Gng7Q61016 68 aa12.1□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Parm1Q923D3 296 aa12.1□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Igkv4-51A0N8I8 119 aa12.1□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Zfp11P10751 647 aa12.1□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Zcchc24B2RVL6 241 aaKnown RBP12.1□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 P04219 140 aa12.1□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Tnfrsf26P83626 204 aa12.1□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Defa23Q5G866 93 aa12.1□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Ttc9cQ810A3 171 aa12.1□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Cep295Q8BQ48 2412 aa12.1□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 BC049762Q8C601 163 aa12.09□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Gtsf1lQ9CWD0 151 aa12.09□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Lypd8Q9D7S0 255 aa12.09□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 G6pc2Q9Z186 355 aa12.09□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Gpr179E9PY61 2293 aa12.09□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Gbf1Q6DFZ1 1861 aa12.09□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Gm43517E9PYS1 339 aa12.09□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Klrd1O54707 179 aa12.09□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Fam19a2Q7TPG7 131 aa12.09□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Olfr477Q8VGI6 310 aa12.09□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Zfp119aQ9JIC0 545 aa12.09□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Igkv4-80A0A075B5L7 116 aa12.09□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Ighv1-81A0A075B5Y4 117 aa12.09□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Pygo1Q9D0P5 417 aa12.09□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 Ly6g6dQ9Z1Q3 135 aa12.09□□□□□ -0.47
Pcdh20-201ENSMUST00000061628 A0A1Y7VMQ4 148 aa12.08□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Pgpep1Q9ESW8 209 aa12.08□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 OtorQ9JIE3 128 aa12.08□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Trav6-4A0A075B6B4 115 aa12.08□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 A0A1Y7VLU2 103 aa12.08□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 P01812 117 aa12.08□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Saa4P31532 130 aa12.08□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Cox6b1P56391 86 aaKnown RBP12.08□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Cdkn2aQ64364 169 aa12.08□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Obox1Q9D350 204 aa12.08□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Myo16Q5DU14 1919 aa12.08□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Hint1P70349 126 aaKnown RBP12.08□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Foxi3E0CZH3 425 aa12.08□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Pax1P09084 446 aa12.08□□□□□ -0.48
Pcdh20-201ENSMUST00000061628 Igkv13-84A0A140T8N3 115 aa12.07□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms