RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Mbd6Q3TY92 1003 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Olfr1199Q8VF94 310 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Parm1Q923D3 296 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Gm14214V9GX35 225 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Ighv1-81A0A075B5Y4 117 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 BC053393A0A0B4J1F6 192 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Gm16442D3YZG3 307 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Tmem200bD3Z0P8 284 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Cd81P35762 236 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 RhogP84096 191 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Pmis2Q497Q9 96 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Spink2Q8BMY7 86 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Ifitm2Q99J93 144 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Heatr1G3X9B1 2143 aaKnown RBP8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Zfp114B2RRA8 586 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Prss29Q99MS4 279 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Cxcl14Q9WUQ5 99 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Bsph2Q0Q236 131 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Tcf15Q60756 195 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Siglec12Q91Y57 467 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Supt4h1bQ9Z199 117 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Trbv17A0A140T8P8 114 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Ly6lH3BJG9 140 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Foxf1Q61080 378 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Hyls1Q9CXX0 307 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Qrich2A0A140LIY9 2337 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Trbv13-3A0A0B4J1H2 113 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Egr1P08046 533 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Gm10384Q3UQ87 92 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 9930022D16RikQ8BG27 128 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 COA4Q8BT51 87 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 1700001C19RikQ8K168 210 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Iah1Q9DB29 249 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Xlr5cQ9JJR2 179 aa8.41□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Gm29644A0A087WPG2 191 aa8.4□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Ighv8-2A0A0A6YW58 119 aa8.4□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Cd59aO55186 123 aa8.4□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Atp5lQ9CPQ8 103 aa8.4□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Mcrip2Q9CQB2 160 aaKnown RBP8.4□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Trdv2-1A0A0G2JGB9 116 aa8.4□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Gm17430F6RSK3 157 aa8.4□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 PlnP61014 52 aa8.4□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Gm10192Q3V0S1 108 aa8.4□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Gm17677B3GLJ5 116 aa8.4□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Gm20458E9PXJ7 78 aa8.4□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Olfr748E9Q9Z0 307 aa8.4□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 H2al1nQ497L1 109 aa8.4□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Oosp2Q4FZG8 168 aa8.4□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Jpt2Q6PGH2 190 aaKnown RBP8.4□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Try10Q792Z1 246 aaKnown RBP8.4□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Poc1aQ8JZX3 405 aa8.4□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Tmem101Q91VP7 257 aa8.4□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Rpp25lQ99JH1 163 aa8.4□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Foxi3E0CZH3 425 aa8.4□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Mmp23O88676 391 aa8.4□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Tmem241Q3UME2 297 aa8.4□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Muc15Q8C6Z1 331 aa8.4□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 GalmQ8K157 342 aa8.4□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Klk7Q91VE3 249 aa8.4□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Lgals6O54891 301 aa8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Mob4Q6PEB6 225 aa8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 4930583I09RikQ9D2E3 102 aa8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Ms4a12A0A087WSB9 263 aa8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Klf12O35738 402 aa8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Khdc1cQ4KL78 166 aa8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Prelid3aQ8VE85 172 aa8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Olfr984Q8VFN1 314 aa8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Plekhb2Q9QZC7 221 aa8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Ighv1-31A0A0A6YWK5 117 aa8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Zic4Q61467 341 aa8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Mrpl16Q99N93 251 aa8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Pygo1Q9D0P5 417 aa8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Rab37Q9JKM7 223 aa8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Nat6Q9R123 314 aa8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Dnajc13D4AFX7 2248 aaKnown RBP8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 H2al2bA9Z055 111 aa8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Gm27027S4R1M6 97 aa8.39□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 AponG3X9D6 251 aa8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Csn3P06796 181 aa8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Cox6a1P43024 111 aa8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Olfr523Q8VFE7 317 aa8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Gm26920S4R2A5 56 aa8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Cnot1Q6ZQ08 2375 aaKnown RBP8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Vmn1r1E9PVR6 306 aa8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Cypt1Q8CH20 168 aa8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Megf10Q6DIB5 1147 aa8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Iba57Q8CAK1 358 aaKnown RBP8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Tmem190Q9D2E9 166 aa8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 St6galnac6Q9JM95 333 aa8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Tnrc6aQ3UHK8 1896 aaKnown RBP8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Igkv4-80A0A075B5L7 116 aa8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Tnfrsf9P20334 256 aa8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Shisal1Q0VBP7 198 aa8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Col13a1Q9R1N9 751 aa8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 G6pc2Q9Z186 355 aa8.38□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Ighv1-22A0A075B5U7 117 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Trav19A0A0B4J1K4 119 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 B1ARW8 110 aa8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 CirbpP60824 172 aaKnown RBP8.37□□□□□ -1.07
Ccdc40-201ENSMUST00000035935 Rbfox3Q8BIF2 374 aa8.37□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 69 ms