RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 TRBV6-8A0A0A6YYG3 113 aa7.37□□□□□ -1.23
PABPC1-224ENST00000610907 F5H768 121 aa7.37□□□□□ -1.23
PABPC1-224ENST00000610907 COX6CP09669 75 aa7.37□□□□□ -1.23
PABPC1-224ENST00000610907 Q1RN00 199 aa7.37□□□□□ -1.23
PABPC1-224ENST00000610907 C9orf66Q5T8R8 295 aa7.37□□□□□ -1.23
PABPC1-224ENST00000610907 SMR3AQ99954 134 aa7.37□□□□□ -1.23
PABPC1-224ENST00000610907 SPATA25Q9BR10 227 aa7.37□□□□□ -1.23
PABPC1-224ENST00000610907 GAGE12HA6NDE8 117 aa7.37□□□□□ -1.23
PABPC1-224ENST00000610907 MTURNQ8N3F0 131 aa7.37□□□□□ -1.23
PABPC1-224ENST00000610907 PPDPFLQ8WWR9 84 aa7.37□□□□□ -1.23
PABPC1-224ENST00000610907 ZNF625Q96I27 306 aaPredicted RBP7.37□□□□□ -1.23
PABPC1-224ENST00000610907 Q9H8V8 135 aa7.37□□□□□ -1.23
PABPC1-224ENST00000610907 MTORP42345 2549 aa7.36□□□□□ -1.23
PABPC1-224ENST00000610907 SIGMAR1Q99720 223 aa7.36□□□□□ -1.23
PABPC1-224ENST00000610907 LOC100131303A0A0U1RQF7 123 aa7.35□□□□□ -1.23
PABPC1-224ENST00000610907 H7C2G1 150 aa7.35□□□□□ -1.23
PABPC1-224ENST00000610907 SLC25A20O43772 301 aa7.35□□□□□ -1.23
PABPC1-224ENST00000610907 LINC00308Q8TCZ7 52 aa7.35□□□□□ -1.23
PABPC1-224ENST00000610907 ICOSQ9Y6W8 199 aa7.35□□□□□ -1.23
PABPC1-224ENST00000610907 NOTCH2Q04721 2471 aa7.35□□□□□ -1.23
PABPC1-224ENST00000610907 TRIAP1O43715 76 aa7.34□□□□□ -1.23
PABPC1-224ENST00000610907 CRLF1O75462 422 aa7.34□□□□□ -1.23
PABPC1-224ENST00000610907 SCGB1A1P11684 91 aa7.34□□□□□ -1.23
PABPC1-224ENST00000610907 PRIMA1Q86XR5 153 aa7.34□□□□□ -1.23
PABPC1-224ENST00000610907 SETD2Q9BYW2 2564 aaPredicted RBP7.34□□□□□ -1.23
PABPC1-224ENST00000610907 LYRM9A8MSI8 78 aa7.33□□□□□ -1.24
PABPC1-224ENST00000610907 C9JAW5 83 aa7.33□□□□□ -1.24
PABPC1-224ENST00000610907 GAGE6Q13070 117 aa7.33□□□□□ -1.24
PABPC1-224ENST00000610907 LINC01620Q4KN68 170 aa7.33□□□□□ -1.24
PABPC1-224ENST00000610907 CHCHD5Q9BSY4 110 aa7.33□□□□□ -1.24
PABPC1-224ENST00000610907 X6R8D5 127 aa7.33□□□□□ -1.24
PABPC1-224ENST00000610907 DEFB130BP0DP73 79 aa7.33□□□□□ -1.24
PABPC1-224ENST00000610907 DEFB130AP0DP74 79 aa7.33□□□□□ -1.24
PABPC1-224ENST00000610907 C21orf62-AS1Q17RA5 79 aa7.33□□□□□ -1.24
PABPC1-224ENST00000610907 ANKRD29Q8N6D5 301 aa7.33□□□□□ -1.24
PABPC1-224ENST00000610907 PRO0255Q9UI72 69 aa7.33□□□□□ -1.24
PABPC1-224ENST00000610907 JMJD1CQ15652 2540 aa7.32□□□□□ -1.24
PABPC1-224ENST00000610907 TRBV10-2A0A0K0K1G8 114 aa7.32□□□□□ -1.24
PABPC1-224ENST00000610907 A0A1B0GUV1 79 aa7.32□□□□□ -1.24
PABPC1-224ENST00000610907 APOC4P55056 127 aa7.32□□□□□ -1.24
PABPC1-224ENST00000610907 MEIG1Q5JSS6 88 aa7.32□□□□□ -1.24
PABPC1-224ENST00000610907 COX7B2Q8TF08 81 aa7.32□□□□□ -1.24
PABPC1-224ENST00000610907 CARD19Q96LW7 228 aa7.32□□□□□ -1.24
PABPC1-224ENST00000610907 NOTCH3Q9UM47 2321 aa7.31□□□□□ -1.24
PABPC1-224ENST00000610907 IGHV3OR16-9A0A0B4J2B5 98 aa7.31□□□□□ -1.24
PABPC1-224ENST00000610907 RPL13AP40429 203 aaKnown RBP7.31□□□□□ -1.24
PABPC1-224ENST00000610907 NPC2P61916 151 aa7.31□□□□□ -1.24
PABPC1-224ENST00000610907 IGLV4-60A0A075B6I1 120 aa7.3□□□□□ -1.24
PABPC1-224ENST00000610907 A0A087WZ39 114 aa7.3□□□□□ -1.24
PABPC1-224ENST00000610907 INAFM1C9JVW0 142 aa7.3□□□□□ -1.24
PABPC1-224ENST00000610907 TMEM262E9PQX1 116 aa7.3□□□□□ -1.24
PABPC1-224ENST00000610907 H3BT86 120 aa7.3□□□□□ -1.24
PABPC1-224ENST00000610907 LST1O00453 97 aa7.3□□□□□ -1.24
PABPC1-224ENST00000610907 GYPEP15421 78 aa7.3□□□□□ -1.24
PABPC1-224ENST00000610907 LINC01561Q8N1V8 128 aa7.3□□□□□ -1.24
PABPC1-224ENST00000610907 DAND5Q8N907 189 aa7.3□□□□□ -1.24
PABPC1-224ENST00000610907 OTOGQ6ZRI0 2925 aa7.29□□□□□ -1.24
PABPC1-224ENST00000610907 CITED1Q99966 193 aa7.29□□□□□ -1.24
PABPC1-224ENST00000610907 CUBNO60494 3623 aa7.29□□□□□ -1.24
PABPC1-224ENST00000610907 LINC00959A0A1B0GUT2 108 aa7.29□□□□□ -1.24
PABPC1-224ENST00000610907 SHISA2Q6UWI4 295 aa7.29□□□□□ -1.24
PABPC1-224ENST00000610907 IBA57-AS1B1ANH7 110 aa7.28□□□□□ -1.24
PABPC1-224ENST00000610907 PAX4O43316 350 aa7.28□□□□□ -1.24
PABPC1-224ENST00000610907 SS18Q15532 418 aa7.28□□□□□ -1.24
PABPC1-224ENST00000610907 FAM222AQ5U5X8 452 aa7.28□□□□□ -1.24
PABPC1-224ENST00000610907 SOSTDC1Q6X4U4 206 aa7.28□□□□□ -1.24
PABPC1-224ENST00000610907 WFDC9Q8NEX5 89 aa7.28□□□□□ -1.24
PABPC1-224ENST00000610907 TRAV13-2A0A0B4J235 113 aa7.27□□□□□ -1.25
PABPC1-224ENST00000610907 WIPF1O43516 503 aa7.27□□□□□ -1.25
PABPC1-224ENST00000610907 MIFP14174 115 aa7.27□□□□□ -1.25
PABPC1-224ENST00000610907 C2orf82Q6UX34 121 aa7.27□□□□□ -1.25
PABPC1-224ENST00000610907 CDIP1Q9H305 208 aa7.27□□□□□ -1.25
PABPC1-224ENST00000610907 C2CD3Q4AC94 2353 aa7.27□□□□□ -1.25
PABPC1-224ENST00000610907 TRAV26-1A0A087WT03 109 aa7.26□□□□□ -1.25
PABPC1-224ENST00000610907 A0A0U1RRA0 63 aa7.26□□□□□ -1.25
PABPC1-224ENST00000610907 COX7A2LO14548 114 aa7.26□□□□□ -1.25
PABPC1-224ENST00000610907 IGKV3OR2-268A0A0C4DH90 116 aa7.25□□□□□ -1.25
PABPC1-224ENST00000610907 NTN5Q8WTR8 489 aaPredicted RBP7.25□□□□□ -1.25
PABPC1-224ENST00000610907 TOMM7Q9P0U1 55 aa7.25□□□□□ -1.25
PABPC1-224ENST00000610907 NIPBLQ6KC79 2804 aaeCLIP7.25□□□□□ -1.251e-8■□□□□ 9.7
PABPC1-224ENST00000610907 DAD1P61803 113 aa7.25□□□□□ -1.25
PABPC1-224ENST00000610907 MIR7-3HGQ8N6C7 128 aa7.25□□□□□ -1.25
PABPC1-224ENST00000610907 UBE2WQ96B02 151 aa7.25□□□□□ -1.25
PABPC1-224ENST00000610907 KRTAP3-3Q9BYR6 98 aa7.25□□□□□ -1.25
PABPC1-224ENST00000610907 KRTAP3-2Q9BYR7 98 aa7.25□□□□□ -1.25
PABPC1-224ENST00000610907 IGHV4-28A0A0C4DH34 117 aa7.24□□□□□ -1.25
PABPC1-224ENST00000610907 TRACP01848 142 aa7.24□□□□□ -1.25
PABPC1-224ENST00000610907 ATP5G1P05496 136 aa7.24□□□□□ -1.25
PABPC1-224ENST00000610907 DEFB135Q30KP9 77 aa7.24□□□□□ -1.25
PABPC1-224ENST00000610907 C6orf226Q5I0X4 101 aa7.24□□□□□ -1.25
PABPC1-224ENST00000610907 C5orf38Q86SI9 138 aa7.24□□□□□ -1.25
PABPC1-224ENST00000610907 Q8IZM0 81 aa7.24□□□□□ -1.25
PABPC1-224ENST00000610907 CLEC2BQ92478 149 aa7.24□□□□□ -1.25
PABPC1-224ENST00000610907 SPART-AS1P0CW21 52 aa7.23□□□□□ -1.25
PABPC1-224ENST00000610907 RPL28P46779 137 aaKnown RBP7.23□□□□□ -1.25
PABPC1-224ENST00000610907 LINC00158P58513 81 aa7.23□□□□□ -1.25
PABPC1-224ENST00000610907 DEFB121Q5J5C9 76 aa7.23□□□□□ -1.25
PABPC1-224ENST00000610907 Q8NAQ8 132 aa7.23□□□□□ -1.25
PABPC1-224ENST00000610907 SPATA3Q8NHX4 192 aa7.23□□□□□ -1.25
PABPC1-224ENST00000610907 SND1-IT1Q9HBX3 110 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms