RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 ANKRD29Q8N6D5 301 aa6.55□□□□□ -1.36
CDK5RAP3-208ENST00000578525 DAND5Q8N907 189 aa6.55□□□□□ -1.36
CDK5RAP3-208ENST00000578525 COX7B2Q8TF08 81 aa6.55□□□□□ -1.36
CDK5RAP3-208ENST00000578525 CARD19Q96LW7 228 aa6.55□□□□□ -1.36
CDK5RAP3-208ENST00000578525 LINC01600Q96MT4 127 aa6.55□□□□□ -1.36
CDK5RAP3-208ENST00000578525 IGLV4-60A0A075B6I1 120 aa6.54□□□□□ -1.36
CDK5RAP3-208ENST00000578525 GYPEP15421 78 aa6.54□□□□□ -1.36
CDK5RAP3-208ENST00000578525 SOSTDC1Q6X4U4 206 aa6.54□□□□□ -1.36
CDK5RAP3-208ENST00000578525 SPATA3Q8NHX4 192 aa6.54□□□□□ -1.36
CDK5RAP3-208ENST00000578525 SIGMAR1Q99720 223 aa6.54□□□□□ -1.36
CDK5RAP3-208ENST00000578525 PDZD2O15018 2839 aa6.54□□□□□ -1.36
CDK5RAP3-208ENST00000578525 TRBV10-2A0A0K0K1G8 114 aa6.53□□□□□ -1.36
CDK5RAP3-208ENST00000578525 APOC4P55056 127 aa6.53□□□□□ -1.36
CDK5RAP3-208ENST00000578525 PRO0255Q9UI72 69 aa6.53□□□□□ -1.36
CDK5RAP3-208ENST00000578525 MXRA5Q9NR99 2828 aa6.53□□□□□ -1.36
CDK5RAP3-208ENST00000578525 IGKV3OR2-268A0A0C4DH90 116 aa6.52□□□□□ -1.37
CDK5RAP3-208ENST00000578525 A0A0U1RRA0 63 aa6.52□□□□□ -1.37
CDK5RAP3-208ENST00000578525 SCGB1A1P11684 91 aa6.52□□□□□ -1.37
CDK5RAP3-208ENST00000578525 FAM222AQ5U5X8 452 aa6.52□□□□□ -1.37
CDK5RAP3-208ENST00000578525 A0A087WZ39 114 aa6.51□□□□□ -1.37
CDK5RAP3-208ENST00000578525 IGHV3OR16-9A0A0B4J2B5 98 aa6.51□□□□□ -1.37
CDK5RAP3-208ENST00000578525 LINC00959A0A1B0GUT2 108 aa6.51□□□□□ -1.37
CDK5RAP3-208ENST00000578525 H3BT86 120 aa6.51□□□□□ -1.37
CDK5RAP3-208ENST00000578525 LST1O00453 97 aa6.51□□□□□ -1.37
CDK5RAP3-208ENST00000578525 PAX4O43316 350 aa6.51□□□□□ -1.37
CDK5RAP3-208ENST00000578525 CITED1Q99966 193 aa6.51□□□□□ -1.37
CDK5RAP3-208ENST00000578525 IGHV4-28A0A0C4DH34 117 aa6.5□□□□□ -1.37
CDK5RAP3-208ENST00000578525 A0A1B0GUV1 79 aa6.5□□□□□ -1.37
CDK5RAP3-208ENST00000578525 SS18Q15532 418 aa6.5□□□□□ -1.37
CDK5RAP3-208ENST00000578525 DEFB135Q30KP9 77 aa6.5□□□□□ -1.37
CDK5RAP3-208ENST00000578525 LINC01561Q8N1V8 128 aa6.5□□□□□ -1.37
CDK5RAP3-208ENST00000578525 CLEC2BQ92478 149 aa6.5□□□□□ -1.37
CDK5RAP3-208ENST00000578525 TOMM7Q9P0U1 55 aa6.5□□□□□ -1.37
CDK5RAP3-208ENST00000578525 FLNAP21333 2647 aaKnown RBP6.5□□□□□ -1.37
CDK5RAP3-208ENST00000578525 CSMD2Q7Z408 3487 aa6.49□□□□□ -1.37
CDK5RAP3-208ENST00000578525 SONP18583 2426 aaKnown RBP6.49□□□□□ -1.37
CDK5RAP3-208ENST00000578525 DAD1P61803 113 aa6.49□□□□□ -1.37
CDK5RAP3-208ENST00000578525 C2orf82Q6UX34 121 aa6.49□□□□□ -1.37
CDK5RAP3-208ENST00000578525 C5orf38Q86SI9 138 aa6.49□□□□□ -1.37
CDK5RAP3-208ENST00000578525 NTN5Q8WTR8 489 aaPredicted RBP6.49□□□□□ -1.37
CDK5RAP3-208ENST00000578525 CDIP1Q9H305 208 aa6.49□□□□□ -1.37
CDK5RAP3-208ENST00000578525 EPG5Q9HCE0 2579 aa6.49□□□□□ -1.37
CDK5RAP3-208ENST00000578525 KMT2BQ9UMN6 2715 aaPredicted RBP6.48□□□□□ -1.37
CDK5RAP3-208ENST00000578525 IBA57-AS1B1ANH7 110 aa6.48□□□□□ -1.37
CDK5RAP3-208ENST00000578525 TMEM262E9PQX1 116 aa6.48□□□□□ -1.37
CDK5RAP3-208ENST00000578525 COX7A2LO14548 114 aa6.48□□□□□ -1.37
CDK5RAP3-208ENST00000578525 MIFP14174 115 aa6.48□□□□□ -1.37
CDK5RAP3-208ENST00000578525 SHISA2Q6UWI4 295 aa6.48□□□□□ -1.37
CDK5RAP3-208ENST00000578525 MIR7-3HGQ8N6C7 128 aa6.48□□□□□ -1.37
CDK5RAP3-208ENST00000578525 UBE2WQ96B02 151 aa6.48□□□□□ -1.37
CDK5RAP3-208ENST00000578525 WNK1Q9H4A3 2382 aa6.48□□□□□ -1.37
CDK5RAP3-208ENST00000578525 TRAV26-1A0A087WT03 109 aa6.47□□□□□ -1.37
CDK5RAP3-208ENST00000578525 TRAV13-2A0A0B4J235 113 aa6.47□□□□□ -1.37
CDK5RAP3-208ENST00000578525 WIPF1O43516 503 aa6.47□□□□□ -1.37
CDK5RAP3-208ENST00000578525 ATP5G1P05496 136 aa6.47□□□□□ -1.37
CDK5RAP3-208ENST00000578525 LINC00158P58513 81 aa6.47□□□□□ -1.37
CDK5RAP3-208ENST00000578525 Q8NAQ8 132 aa6.47□□□□□ -1.37
CDK5RAP3-208ENST00000578525 WFDC9Q8NEX5 89 aa6.47□□□□□ -1.37
CDK5RAP3-208ENST00000578525 CENPEQ02224 2701 aa6.46□□□□□ -1.38
CDK5RAP3-208ENST00000578525 A0A096LPF7 62 aa6.46□□□□□ -1.38
CDK5RAP3-208ENST00000578525 DEFB4AO15263 64 aa6.46□□□□□ -1.38
CDK5RAP3-208ENST00000578525 CRPP02741 224 aa6.46□□□□□ -1.38
CDK5RAP3-208ENST00000578525 MYO9AB2RTY4 2548 aa6.46□□□□□ -1.38
CDK5RAP3-208ENST00000578525 TENM4Q6N022 2769 aa6.46□□□□□ -1.38
CDK5RAP3-208ENST00000578525 TLN2Q9Y4G6 2542 aa6.45□□□□□ -1.38
CDK5RAP3-208ENST00000578525 SPART-AS1P0CW21 52 aa6.45□□□□□ -1.38
CDK5RAP3-208ENST00000578525 XCL1P47992 114 aa6.45□□□□□ -1.38
CDK5RAP3-208ENST00000578525 Q8IZM0 81 aa6.45□□□□□ -1.38
CDK5RAP3-208ENST00000578525 SND1-IT1Q9HBX3 110 aa6.45□□□□□ -1.38
CDK5RAP3-208ENST00000578525 CELA1Q9UNI1 258 aa6.45□□□□□ -1.38
CDK5RAP3-208ENST00000578525 MAP1AP78559 2803 aaPredicted RBP6.45□□□□□ -1.38
CDK5RAP3-208ENST00000578525 AKAP9Q99996 3911 aa6.44□□□□□ -1.38
CDK5RAP3-208ENST00000578525 TRAV8-4A0A0B4J246 113 aa6.44□□□□□ -1.38
CDK5RAP3-208ENST00000578525 TRACP01848 142 aa6.44□□□□□ -1.38
CDK5RAP3-208ENST00000578525 RPL28P46779 137 aaKnown RBP6.44□□□□□ -1.38
CDK5RAP3-208ENST00000578525 CCL18P55774 89 aa6.44□□□□□ -1.38
CDK5RAP3-208ENST00000578525 C6orf226Q5I0X4 101 aa6.44□□□□□ -1.38
CDK5RAP3-208ENST00000578525 CLPSL2Q6UWE3 100 aa6.44□□□□□ -1.38
CDK5RAP3-208ENST00000578525 CCDC168Q8NDH2 2452 aa6.44□□□□□ -1.38
CDK5RAP3-208ENST00000578525 IGKV2-28A0A075B6P5 120 aa6.43□□□□□ -1.38
CDK5RAP3-208ENST00000578525 IGKV2D-28P01615 120 aa6.43□□□□□ -1.38
CDK5RAP3-208ENST00000578525 IGHV4-30-4P0DP06 118 aa6.43□□□□□ -1.38
CDK5RAP3-208ENST00000578525 MRPL23Q16540 153 aaKnown RBP6.43□□□□□ -1.38
CDK5RAP3-208ENST00000578525 DEFB121Q5J5C9 76 aa6.43□□□□□ -1.38
CDK5RAP3-208ENST00000578525 CD164L2Q6UWJ8 174 aa6.43□□□□□ -1.38
CDK5RAP3-208ENST00000578525 HIVEP2P31629 2446 aa6.42□□□□□ -1.38
CDK5RAP3-208ENST00000578525 CHD6Q8TD26 2715 aa6.42□□□□□ -1.38
CDK5RAP3-208ENST00000578525 TEX49A0A1B0GTD5 131 aa6.42□□□□□ -1.38
CDK5RAP3-208ENST00000578525 MT-ATP8P03928 68 aa6.42□□□□□ -1.38
CDK5RAP3-208ENST00000578525 PFN2P35080 140 aa6.42□□□□□ -1.38
CDK5RAP3-208ENST00000578525 CXCL5P42830 114 aa6.42□□□□□ -1.38
CDK5RAP3-208ENST00000578525 XGP55808 180 aa6.42□□□□□ -1.38
CDK5RAP3-208ENST00000578525 LELP1Q5T871 98 aa6.42□□□□□ -1.38
CDK5RAP3-208ENST00000578525 LINC00269Q8N2A0 174 aa6.42□□□□□ -1.38
CDK5RAP3-208ENST00000578525 LINC00337Q8N6G1 96 aa6.42□□□□□ -1.38
CDK5RAP3-208ENST00000578525 CHCHD10Q8WYQ3 142 aaPredicted RBP6.42□□□□□ -1.38
CDK5RAP3-208ENST00000578525 C11orf68Q9H3H3 251 aaKnown RBP6.42□□□□□ -1.38
CDK5RAP3-208ENST00000578525 ANGP03950 147 aaKnown RBP6.41□□□□□ -1.38
CDK5RAP3-208ENST00000578525 HTN3P15516 51 aa6.41□□□□□ -1.38
CDK5RAP3-208ENST00000578525 REG3AQ06141 175 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms