RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 NOP10Q9NPE3 64 aaKnown RBP4.1□□□□□ -1.75
CDH13-213ENST00000569454 MUC2Q02817 5179 aa4.1□□□□□ -1.75
CDH13-213ENST00000569454 TRBV20-1A0A075B6N2 111 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.09□□□□□ -1.75
CDH13-213ENST00000569454 A0A0B4J2C4 111 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 TRGV4A0A0C4DH28 118 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 PLAC8L1A1L4L8 177 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 IGKV2-29A2NJV5 120 aaPredicted RBP4.09□□□□□ -1.75
CDH13-213ENST00000569454 F8W1H4 67 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 J3QR89 54 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 K7ERJ3 54 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 UBE2L6O14933 153 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 IGHV3-30P01768 117 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 IGHV3-30-5P0DP03 117 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 IFITM1P13164 125 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 RPL35AP18077 110 aaKnown RBP4.09□□□□□ -1.75
CDH13-213ENST00000569454 MALP21145 153 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 APOC4P55056 127 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 OCIAD2Q56VL3 154 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 ZFAND6Q6FIF0 208 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 SFTA2Q6UW10 78 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 SBSPONQ8IVN8 264 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 LINC00612Q8N6U2 182 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 MRAPQ8TCY5 172 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 VSIG2Q96IQ7 327 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 OPRPNQ99935 248 aaPredicted RBP4.09□□□□□ -1.75
CDH13-213ENST00000569454 SPANXDQ9BXN6 97 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 PPDPFQ9H3Y8 114 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 SPANXCQ9NY87 97 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 NDUFA12Q9UI09 145 aa4.09□□□□□ -1.75
CDH13-213ENST00000569454 IGHV3-38A0A0C4DH36 116 aa4.08□□□□□ -1.76
CDH13-213ENST00000569454 IGLV5-39A0A0G2JS06 123 aa4.08□□□□□ -1.76
CDH13-213ENST00000569454 A0A0U1RRA0 63 aa4.08□□□□□ -1.76
CDH13-213ENST00000569454 LYRM9A8MSI8 78 aa4.08□□□□□ -1.76
CDH13-213ENST00000569454 NACAE9PAV3 2078 aa4.08□□□□□ -1.76
CDH13-213ENST00000569454 GAGE7O76087 117 aa4.08□□□□□ -1.76
CDH13-213ENST00000569454 GAGE12FP0CL80 117 aa4.08□□□□□ -1.76
CDH13-213ENST00000569454 GAGE12GP0CL81 117 aa4.08□□□□□ -1.76
CDH13-213ENST00000569454 GAGE12IP0CL82 117 aa4.08□□□□□ -1.76
CDH13-213ENST00000569454 CIRBPQ14011 172 aaKnown RBP4.08□□□□□ -1.76
CDH13-213ENST00000569454 C10orf126Q8N4M7 172 aa4.08□□□□□ -1.76
CDH13-213ENST00000569454 SORL1Q92673 2214 aa4.08□□□□□ -1.76
CDH13-213ENST00000569454 FAM104AQ969W3 186 aa4.08□□□□□ -1.76
CDH13-213ENST00000569454 PRO1854Q9UHT4 67 aa4.08□□□□□ -1.76
CDH13-213ENST00000569454 TEX48A0A1B0GUV7 120 aa4.07□□□□□ -1.76
CDH13-213ENST00000569454 GAGE12JA6NER3 117 aa4.07□□□□□ -1.76
CDH13-213ENST00000569454 INAFM1C9JVW0 142 aa4.07□□□□□ -1.76
CDH13-213ENST00000569454 M0QXV9 152 aa4.07□□□□□ -1.76
CDH13-213ENST00000569454 NDUFA1O15239 70 aa4.07□□□□□ -1.76
CDH13-213ENST00000569454 CRLF1O75462 422 aa4.07□□□□□ -1.76
CDH13-213ENST00000569454 PRM2P04554 102 aa4.07□□□□□ -1.76
CDH13-213ENST00000569454 LINC00694P0DN24 101 aa4.07□□□□□ -1.76
CDH13-213ENST00000569454 GAGE4Q13068 117 aa4.07□□□□□ -1.76
CDH13-213ENST00000569454 GAGE5Q13069 117 aa4.07□□□□□ -1.76
CDH13-213ENST00000569454 MIAQ16674 131 aa4.07□□□□□ -1.76
CDH13-213ENST00000569454 GAGE13Q4V321 117 aa4.07□□□□□ -1.76
CDH13-213ENST00000569454 C6orf226Q5I0X4 101 aa4.07□□□□□ -1.76
CDH13-213ENST00000569454 DEFB104AQ8WTQ1 72 aa4.07□□□□□ -1.76
CDH13-213ENST00000569454 SMR3AQ99954 134 aa4.07□□□□□ -1.76
CDH13-213ENST00000569454 NAA38Q9BRA0 125 aaKnown RBP4.07□□□□□ -1.76
CDH13-213ENST00000569454 WFDC10AQ9H1F0 79 aa4.07□□□□□ -1.76
CDH13-213ENST00000569454 CDC42SE2Q9NRR3 84 aa4.07□□□□□ -1.76
CDH13-213ENST00000569454 TRBV6-8A0A0A6YYG3 113 aa4.06□□□□□ -1.76
CDH13-213ENST00000569454 FAM229AH3BQW9 127 aa4.06□□□□□ -1.76
CDH13-213ENST00000569454 EIF4EBP3O60516 100 aaPredicted RBP4.06□□□□□ -1.76
CDH13-213ENST00000569454 APOMO95445 188 aa4.06□□□□□ -1.76
CDH13-213ENST00000569454 TSPAN13O95857 204 aa4.06□□□□□ -1.76
CDH13-213ENST00000569454 KRTAP10-3P60369 221 aa4.06□□□□□ -1.76
CDH13-213ENST00000569454 FHL2Q14192 279 aa4.06□□□□□ -1.76
CDH13-213ENST00000569454 LINC00242Q5T6M2 205 aa4.06□□□□□ -1.76
CDH13-213ENST00000569454 CEMP1Q6PRD7 247 aaPredicted RBP4.06□□□□□ -1.76
CDH13-213ENST00000569454 ATP6V0E2Q8NHE4 81 aa4.06□□□□□ -1.76
CDH13-213ENST00000569454 CDKN2A-AS1Q9UH64 79 aa4.06□□□□□ -1.76
CDH13-213ENST00000569454 IGHV3-64A0A075B6Q5 118 aa4.05□□□□□ -1.76
CDH13-213ENST00000569454 SMIM1B2RUZ4 78 aa4.05□□□□□ -1.76
CDH13-213ENST00000569454 SPINK8P0C7L1 97 aa4.05□□□□□ -1.76
CDH13-213ENST00000569454 CFC1BP0CG36 223 aa4.05□□□□□ -1.76
CDH13-213ENST00000569454 CFC1P0CG37 223 aa4.05□□□□□ -1.76
CDH13-213ENST00000569454 MIFP14174 115 aa4.05□□□□□ -1.76
CDH13-213ENST00000569454 RNF151Q2KHN1 245 aa4.05□□□□□ -1.76
CDH13-213ENST00000569454 RNASE13Q5GAN3 156 aaKnown RBP4.05□□□□□ -1.76
CDH13-213ENST00000569454 NTM-AS1Q6ZSK4 140 aa4.05□□□□□ -1.76
CDH13-213ENST00000569454 SH2D6Q7Z4S9 175 aa4.05□□□□□ -1.76
CDH13-213ENST00000569454 WFDC9Q8NEX5 89 aa4.05□□□□□ -1.76
CDH13-213ENST00000569454 LITAFQ99732 161 aa4.05□□□□□ -1.76
CDH13-213ENST00000569454 Q9UF83 564 aa4.05□□□□□ -1.76
CDH13-213ENST00000569454 PRO0255Q9UI72 69 aa4.05□□□□□ -1.76
CDH13-213ENST00000569454 ERG28Q9UKR5 140 aa4.05□□□□□ -1.76
CDH13-213ENST00000569454 TENM2Q9NT68 2774 aa4.05□□□□□ -1.76
CDH13-213ENST00000569454 TRAV8-3A0A0A6YYJ7 113 aa4.04□□□□□ -1.76
CDH13-213ENST00000569454 LOC107984156A0A0G2JMH3 177 aa4.04□□□□□ -1.76
CDH13-213ENST00000569454 H3BMG7 143 aa4.04□□□□□ -1.76
CDH13-213ENST00000569454 IGHV3-33P01772 117 aa4.04□□□□□ -1.76
CDH13-213ENST00000569454 COX6CP09669 75 aa4.04□□□□□ -1.76
CDH13-213ENST00000569454 MUSTN1Q8IVN3 82 aa4.04□□□□□ -1.76
CDH13-213ENST00000569454 ARL17AQ8IVW1 177 aa4.04□□□□□ -1.76
CDH13-213ENST00000569454 LINC01561Q8N1V8 128 aa4.04□□□□□ -1.76
CDH13-213ENST00000569454 VPS25Q9BRG1 176 aa4.04□□□□□ -1.76
CDH13-213ENST00000569454 CHCHD5Q9BSY4 110 aa4.04□□□□□ -1.76
CDH13-213ENST00000569454 X6R8D5 127 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms