RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 TM2D2Q9BX73 214 aa6.12□□□□□ -1.43
LSM3P5-201ENST00000566307 SPANXB1Q9NS25 103 aaPredicted RBP6.12□□□□□ -1.43
LSM3P5-201ENST00000566307 IGLV4-60A0A075B6I1 120 aa6.11□□□□□ -1.43
LSM3P5-201ENST00000566307 A0A0J9YWU9 116 aa6.11□□□□□ -1.43
LSM3P5-201ENST00000566307 IGHV3-30-3P0DP02 117 aa6.11□□□□□ -1.43
LSM3P5-201ENST00000566307 TSPEAR-AS2P59090 65 aa6.11□□□□□ -1.43
LSM3P5-201ENST00000566307 RNASE13Q5GAN3 156 aaKnown RBP6.11□□□□□ -1.43
LSM3P5-201ENST00000566307 ZFAND6Q6FIF0 208 aa6.11□□□□□ -1.43
LSM3P5-201ENST00000566307 LINC00469Q8N7U9 141 aa6.11□□□□□ -1.43
LSM3P5-201ENST00000566307 ORAOV1Q8WV07 137 aa6.11□□□□□ -1.43
LSM3P5-201ENST00000566307 TTTY13Q9BZ97 58 aa6.11□□□□□ -1.43
LSM3P5-201ENST00000566307 CDKN2A-AS1Q9UH64 79 aa6.11□□□□□ -1.43
LSM3P5-201ENST00000566307 TCTAP57738 103 aa6.1□□□□□ -1.43
LSM3P5-201ENST00000566307 LCE3BQ5TA77 95 aa6.1□□□□□ -1.43
LSM3P5-201ENST00000566307 Q6ZTC4 211 aa6.1□□□□□ -1.43
LSM3P5-201ENST00000566307 TRAV10A0A0B4J240 114 aa6.09□□□□□ -1.43
LSM3P5-201ENST00000566307 TRAV13-1A0A0B4J241 112 aa6.09□□□□□ -1.43
LSM3P5-201ENST00000566307 IGHV3OR16-9A0A0B4J2B5 98 aa6.09□□□□□ -1.43
LSM3P5-201ENST00000566307 A6NDN8 102 aa6.09□□□□□ -1.43
LSM3P5-201ENST00000566307 SMIM1B2RUZ4 78 aa6.09□□□□□ -1.43
LSM3P5-201ENST00000566307 TIMM17BO60830 172 aa6.09□□□□□ -1.43
LSM3P5-201ENST00000566307 HTN3P15516 51 aa6.09□□□□□ -1.43
LSM3P5-201ENST00000566307 COX6A2Q02221 97 aa6.09□□□□□ -1.43
LSM3P5-201ENST00000566307 LYPD5Q6UWN5 251 aa6.09□□□□□ -1.43
LSM3P5-201ENST00000566307 Q6ZVH6 145 aa6.09□□□□□ -1.43
LSM3P5-201ENST00000566307 LURAP1LQ8IV03 231 aa6.09□□□□□ -1.43
LSM3P5-201ENST00000566307 C15orf53Q8NAA6 179 aa6.09□□□□□ -1.43
LSM3P5-201ENST00000566307 B9D2Q9BPU9 175 aa6.09□□□□□ -1.43
LSM3P5-201ENST00000566307 PLA2G2DQ9UNK4 145 aa6.09□□□□□ -1.43
LSM3P5-201ENST00000566307 MGAM2Q2M2H8 2515 aa6.08□□□□□ -1.44
LSM3P5-201ENST00000566307 A0A087WZ39 114 aa6.08□□□□□ -1.44
LSM3P5-201ENST00000566307 DEFB131BA0A096LNP1 70 aa6.08□□□□□ -1.44
LSM3P5-201ENST00000566307 LINC00959A0A1B0GUT2 108 aa6.08□□□□□ -1.44
LSM3P5-201ENST00000566307 BATFQ16520 125 aa6.08□□□□□ -1.44
LSM3P5-201ENST00000566307 DEFB121Q5J5C9 76 aa6.08□□□□□ -1.44
LSM3P5-201ENST00000566307 SCGB1D4Q6XE38 83 aa6.08□□□□□ -1.44
LSM3P5-201ENST00000566307 CEND1Q8N111 149 aa6.08□□□□□ -1.44
LSM3P5-201ENST00000566307 PPDPFQ9H3Y8 114 aa6.08□□□□□ -1.44
LSM3P5-201ENST00000566307 PRR34Q9NV39 138 aa6.08□□□□□ -1.44
LSM3P5-201ENST00000566307 NOTCH1P46531 2555 aa6.07□□□□□ -1.44
LSM3P5-201ENST00000566307 TRAV8-3A0A0A6YYJ7 113 aa6.07□□□□□ -1.44
LSM3P5-201ENST00000566307 A0A0J9YXY3 114 aa6.07□□□□□ -1.44
LSM3P5-201ENST00000566307 A0A1B0GWB2 263 aa6.07□□□□□ -1.44
LSM3P5-201ENST00000566307 TMEM238C9JI98 176 aa6.07□□□□□ -1.44
LSM3P5-201ENST00000566307 TMEM262E9PQX1 116 aa6.07□□□□□ -1.44
LSM3P5-201ENST00000566307 NDUFA1O15239 70 aa6.07□□□□□ -1.44
LSM3P5-201ENST00000566307 SPINK8P0C7L1 97 aa6.07□□□□□ -1.44
LSM3P5-201ENST00000566307 NANOS2P60321 138 aaKnown RBP6.07□□□□□ -1.44
LSM3P5-201ENST00000566307 SS18Q15532 418 aa6.07□□□□□ -1.44
LSM3P5-201ENST00000566307 SFTA2Q6UW10 78 aa6.07□□□□□ -1.44
LSM3P5-201ENST00000566307 C10orf126Q8N4M7 172 aa6.07□□□□□ -1.44
LSM3P5-201ENST00000566307 NDUFA12Q9UI09 145 aa6.07□□□□□ -1.44
LSM3P5-201ENST00000566307 NBEAL2Q6ZNJ1 2754 aa6.07□□□□□ -1.44
LSM3P5-201ENST00000566307 PRB2P02812 416 aaPredicted RBP6.06□□□□□ -1.44
LSM3P5-201ENST00000566307 NHLRC4P0CG21 123 aaPredicted RBP6.06□□□□□ -1.44
LSM3P5-201ENST00000566307 HERV-K104P63124 156 aa6.06□□□□□ -1.44
LSM3P5-201ENST00000566307 HIST1H4GQ99525 98 aa6.06□□□□□ -1.44
LSM3P5-201ENST00000566307 PKD1L1Q8TDX9 2849 aa6.06□□□□□ -1.44
LSM3P5-201ENST00000566307 TAX1BP3O14907 124 aa6.05□□□□□ -1.44
LSM3P5-201ENST00000566307 GCSHP23434 173 aa6.05□□□□□ -1.44
LSM3P5-201ENST00000566307 PTTG1IPP53801 180 aa6.05□□□□□ -1.44
LSM3P5-201ENST00000566307 FXYD2P54710 66 aa6.05□□□□□ -1.44
LSM3P5-201ENST00000566307 CD164L2Q6UWJ8 174 aa6.05□□□□□ -1.44
LSM3P5-201ENST00000566307 ZNF625Q96I27 306 aaPredicted RBP6.05□□□□□ -1.44
LSM3P5-201ENST00000566307 LITAFQ99732 161 aa6.05□□□□□ -1.44
LSM3P5-201ENST00000566307 SPANXDQ9BXN6 97 aa6.05□□□□□ -1.44
LSM3P5-201ENST00000566307 SPANXCQ9NY87 97 aa6.05□□□□□ -1.44
LSM3P5-201ENST00000566307 IGHV3-64A0A075B6Q5 118 aa6.04□□□□□ -1.44
LSM3P5-201ENST00000566307 TRAV8-4A0A0B4J246 113 aa6.04□□□□□ -1.44
LSM3P5-201ENST00000566307 A0A1B0GV90 55 aa6.04□□□□□ -1.44
LSM3P5-201ENST00000566307 IGHV3-30P01768 117 aa6.04□□□□□ -1.44
LSM3P5-201ENST00000566307 IGHV3-30-5P0DP03 117 aa6.04□□□□□ -1.44
LSM3P5-201ENST00000566307 IFITM1P13164 125 aa6.04□□□□□ -1.44
LSM3P5-201ENST00000566307 MALP21145 153 aa6.04□□□□□ -1.44
LSM3P5-201ENST00000566307 REG3AQ06141 175 aa6.04□□□□□ -1.44
LSM3P5-201ENST00000566307 SRSF9Q13242 221 aaKnown RBP eCLIP6.04□□□□□ -1.44
LSM3P5-201ENST00000566307 MRAPQ8TCY5 172 aa6.04□□□□□ -1.44
LSM3P5-201ENST00000566307 COX11Q9Y6N1 276 aa6.04□□□□□ -1.44
LSM3P5-201ENST00000566307 NBEAL1Q6ZS30 2694 aa6.04□□□□□ -1.44
LSM3P5-201ENST00000566307 ANGP03950 147 aaKnown RBP6.03□□□□□ -1.44
LSM3P5-201ENST00000566307 SMIM13P0DJ93 91 aa6.03□□□□□ -1.44
LSM3P5-201ENST00000566307 LINC01556Q5JQF7 62 aa6.03□□□□□ -1.44
LSM3P5-201ENST00000566307 KRTAP19-1Q8IUB9 90 aa6.03□□□□□ -1.44
LSM3P5-201ENST00000566307 LINC00269Q8N2A0 174 aa6.03□□□□□ -1.44
LSM3P5-201ENST00000566307 COX7B2Q8TF08 81 aa6.03□□□□□ -1.44
LSM3P5-201ENST00000566307 C9orf118A6NHY6 69 aa6.02□□□□□ -1.45
LSM3P5-201ENST00000566307 CXCL5P42830 114 aa6.02□□□□□ -1.45
LSM3P5-201ENST00000566307 RPL24P83731 157 aaKnown RBP6.02□□□□□ -1.45
LSM3P5-201ENST00000566307 CIRBPQ14011 172 aaKnown RBP6.02□□□□□ -1.45
LSM3P5-201ENST00000566307 MIAQ16674 131 aa6.02□□□□□ -1.45
LSM3P5-201ENST00000566307 ESRGQ1W209 222 aa6.02□□□□□ -1.45
LSM3P5-201ENST00000566307 Q8IZM0 81 aa6.02□□□□□ -1.45
LSM3P5-201ENST00000566307 COPS9Q8WXC6 57 aa6.02□□□□□ -1.45
LSM3P5-201ENST00000566307 CHCHD10Q8WYQ3 142 aaPredicted RBP6.02□□□□□ -1.45
LSM3P5-201ENST00000566307 TENM3Q9P273 2699 aa6.02□□□□□ -1.45
LSM3P5-201ENST00000566307 COX7A2LO14548 114 aa6.01□□□□□ -1.45
LSM3P5-201ENST00000566307 DNAH10OSP0CZ25 163 aa6.01□□□□□ -1.45
LSM3P5-201ENST00000566307 UPK3BQ9BT76 320 aa6.01□□□□□ -1.45
LSM3P5-201ENST00000566307 Q9H8V8 135 aa6.01□□□□□ -1.45
LSM3P5-201ENST00000566307 TRAV16A0A0A6YYK6 109 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms