RNA–Protein interactions for RNA: ENST00000564757.5

SCAPER-213, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 626 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-213ENST00000564757 SHANK2Q9UPX8 1470 aa0.35□□□□□ -2.35
SCAPER-213ENST00000564757 RNF213Q63HN8 5207 aa0.34□□□□□ -2.35
SCAPER-213ENST00000564757 IGLC1P0CG04 106 aa0.34□□□□□ -2.36
SCAPER-213ENST00000564757 KRTDAPP60985 99 aa0.34□□□□□ -2.36
SCAPER-213ENST00000564757 HSD52Q0P140 79 aa0.34□□□□□ -2.36
SCAPER-213ENST00000564757 FAM223AQ8IWN6 122 aa0.34□□□□□ -2.36
SCAPER-213ENST00000564757 LINC00472Q9H8W2 130 aa0.34□□□□□ -2.36
SCAPER-213ENST00000564757 CDC42SE2Q9NRR3 84 aa0.34□□□□□ -2.36
SCAPER-213ENST00000564757 HERC1Q15751 4861 aa0.34□□□□□ -2.36
SCAPER-213ENST00000564757 NCOA3Q9Y6Q9 1424 aa0.33□□□□□ -2.36
SCAPER-213ENST00000564757 PIGYQ3MUY2 71 aa0.33□□□□□ -2.36
SCAPER-213ENST00000564757 FDCSPQ8NFU4 85 aa0.33□□□□□ -2.36
SCAPER-213ENST00000564757 TCEAL7Q9BRU2 100 aa0.33□□□□□ -2.36
SCAPER-213ENST00000564757 PRO1854Q9UHT4 67 aa0.33□□□□□ -2.36
SCAPER-213ENST00000564757 SHROOM2Q13796 1616 aa0.33□□□□□ -2.36
SCAPER-213ENST00000564757 BIVM-ERCC5R4GMW8 1640 aa0.33□□□□□ -2.36
SCAPER-213ENST00000564757 BTAF1O14981 1849 aa0.33□□□□□ -2.36
SCAPER-213ENST00000564757 MYOM1P52179 1685 aa0.33□□□□□ -2.36
SCAPER-213ENST00000564757 ARHGAP5Q13017 1502 aa0.33□□□□□ -2.36
SCAPER-213ENST00000564757 PTPRQQ9UMZ3 2332 aa0.32□□□□□ -2.36
SCAPER-213ENST00000564757 BSNQ9UPA5 3926 aa0.32□□□□□ -2.36
SCAPER-213ENST00000564757 H3BQ15 152 aa0.32□□□□□ -2.36
SCAPER-213ENST00000564757 AKAP6Q13023 2319 aa0.32□□□□□ -2.36
SCAPER-213ENST00000564757 PIEZO2Q9H5I5 2752 aa0.32□□□□□ -2.36
SCAPER-213ENST00000564757 SONP18583 2426 aaKnown RBP0.32□□□□□ -2.36
SCAPER-213ENST00000564757 DMBT1Q9UGM3 2413 aaPredicted RBP0.32□□□□□ -2.36
SCAPER-213ENST00000564757 CSMD3Q7Z407 3707 aa0.31□□□□□ -2.36
SCAPER-213ENST00000564757 HRNRQ86YZ3 2850 aaPredicted RBP0.31□□□□□ -2.36
SCAPER-213ENST00000564757 RYR3Q15413 4870 aa0.31□□□□□ -2.36
SCAPER-213ENST00000564757 NHSL1Q5SYE7 1610 aa0.31□□□□□ -2.36
SCAPER-213ENST00000564757 RAPGEF6Q8TEU7 1601 aa0.31□□□□□ -2.36
SCAPER-213ENST00000564757 WDFY4Q6ZS81 3184 aa0.31□□□□□ -2.36
SCAPER-213ENST00000564757 ANKHD1Q8IWZ3 2542 aaKnown RBP0.31□□□□□ -2.36
SCAPER-213ENST00000564757 COL6A5A8TX70 2615 aa0.31□□□□□ -2.36
SCAPER-213ENST00000564757 CREBBPQ92793 2442 aa0.31□□□□□ -2.36
SCAPER-213ENST00000564757 ABCA2Q9BZC7 2435 aa0.31□□□□□ -2.36
SCAPER-213ENST00000564757 TRBV6-1A0A0K0K1D8 114 aa0.31□□□□□ -2.36
SCAPER-213ENST00000564757 WFDC2Q14508 124 aa0.31□□□□□ -2.36
SCAPER-213ENST00000564757 LRP1Q07954 4544 aaKnown RBP0.31□□□□□ -2.36
SCAPER-213ENST00000564757 CELSR1Q9NYQ6 3014 aa0.31□□□□□ -2.36
SCAPER-213ENST00000564757 TET3O43151 1660 aa0.3□□□□□ -2.36
SCAPER-213ENST00000564757 GOLGA4Q13439 2230 aaKnown RBP0.3□□□□□ -2.36
SCAPER-213ENST00000564757 A0A1B0GWA3 101 aa0.3□□□□□ -2.36
SCAPER-213ENST00000564757 UBE2D3P61077 147 aa0.3□□□□□ -2.36
SCAPER-213ENST00000564757 UBE2D2P62837 147 aa0.3□□□□□ -2.36
SCAPER-213ENST00000564757 TMEM263Q8WUH6 116 aaKnown RBP0.3□□□□□ -2.36
SCAPER-213ENST00000564757 TENM4Q6N022 2769 aa0.3□□□□□ -2.36
SCAPER-213ENST00000564757 SETD2Q9BYW2 2564 aaPredicted RBP0.3□□□□□ -2.36
SCAPER-213ENST00000564757 HIVEP3Q5T1R4 2406 aa0.29□□□□□ -2.36
SCAPER-213ENST00000564757 MYO7BQ6PIF6 2116 aa0.29□□□□□ -2.36
SCAPER-213ENST00000564757 POLA1P09884 1462 aaPredicted RBP0.29□□□□□ -2.36
SCAPER-213ENST00000564757 COL7A1Q02388 2944 aa0.29□□□□□ -2.36
SCAPER-213ENST00000564757 PKDREJQ9NTG1 2253 aa0.29□□□□□ -2.36
SCAPER-213ENST00000564757 DOPEY2Q9Y3R5 2298 aa0.29□□□□□ -2.36
SCAPER-213ENST00000564757 SETXQ7Z333 2677 aaKnown RBP0.29□□□□□ -2.36
SCAPER-213ENST00000564757 TMEM218A2RU14 115 aa0.29□□□□□ -2.36
SCAPER-213ENST00000564757 TMEM262E9PQX1 116 aa0.29□□□□□ -2.36
SCAPER-213ENST00000564757 SEC11AP67812 179 aa0.29□□□□□ -2.36
SCAPER-213ENST00000564757 DEFB109BQ30KR1 87 aa0.29□□□□□ -2.36
SCAPER-213ENST00000564757 PRO1933Q9H354 126 aa0.29□□□□□ -2.36
SCAPER-213ENST00000564757 SRCAPQ6ZRS2 3230 aa0.29□□□□□ -2.36
SCAPER-213ENST00000564757 CHD8Q9HCK8 2581 aa0.29□□□□□ -2.36
SCAPER-213ENST00000564757 ARHGEF12Q9NZN5 1544 aa0.28□□□□□ -2.36
SCAPER-213ENST00000564757 C10orf113Q5VZT2 155 aa0.28□□□□□ -2.36
SCAPER-213ENST00000564757 CGREF1Q99674 301 aa0.28□□□□□ -2.36
SCAPER-213ENST00000564757 ANKRD17O75179 2603 aaKnown RBP0.28□□□□□ -2.37
SCAPER-213ENST00000564757 HMCN2Q8NDA2 5059 aa0.28□□□□□ -2.37
SCAPER-213ENST00000564757 EHBP1L1Q8N3D4 1523 aa0.28□□□□□ -2.37
SCAPER-213ENST00000564757 PEG3Q9GZU2 1588 aa0.28□□□□□ -2.37
SCAPER-213ENST00000564757 USF3Q68DE3 2245 aa0.28□□□□□ -2.37
SCAPER-213ENST00000564757 TOP2BQ02880 1626 aa0.27□□□□□ -2.37
SCAPER-213ENST00000564757 CC2D2AQ9P2K1 1620 aa0.27□□□□□ -2.37
SCAPER-213ENST00000564757 SPHKAPQ2M3C7 1700 aa0.27□□□□□ -2.37
SCAPER-213ENST00000564757 hADV29S1A0JD25 119 aa0.27□□□□□ -2.37
SCAPER-213ENST00000564757 ATP6V1G2-DDX39BF2Z307 99 aa0.27□□□□□ -2.37
SCAPER-213ENST00000564757 VAMP8Q9BV40 100 aa0.27□□□□□ -2.37
SCAPER-213ENST00000564757 AP4S1Q9Y587 144 aa0.27□□□□□ -2.37
SCAPER-213ENST00000564757 HMGXB3Q12766 1538 aa0.27□□□□□ -2.37
SCAPER-213ENST00000564757 SPTBN4Q9H254 2564 aa0.27□□□□□ -2.37
SCAPER-213ENST00000564757 ARHGEF5Q12774 1597 aa0.27□□□□□ -2.37
SCAPER-213ENST00000564757 USP9XQ93008 2570 aaPredicted RBP0.26□□□□□ -2.37
SCAPER-213ENST00000564757 PDZD2O15018 2839 aa0.26□□□□□ -2.37
SCAPER-213ENST00000564757 CELSR3Q9NYQ7 3312 aa0.26□□□□□ -2.37
SCAPER-213ENST00000564757 FAM223BA6NKX1 122 aa0.26□□□□□ -2.37
SCAPER-213ENST00000564757 I3L2K1 104 aa0.26□□□□□ -2.37
SCAPER-213ENST00000564757 GNGT2O14610 69 aa0.26□□□□□ -2.37
SCAPER-213ENST00000564757 SAA2P0DJI9 122 aaPredicted RBP0.26□□□□□ -2.37
SCAPER-213ENST00000564757 S100A10P60903 97 aa0.26□□□□□ -2.37
SCAPER-213ENST00000564757 KRTAP20-1Q3LI63 56 aa0.26□□□□□ -2.37
SCAPER-213ENST00000564757 LAMC1P11047 1609 aa0.26□□□□□ -2.37
SCAPER-213ENST00000564757 MYO18BQ8IUG5 2567 aa0.26□□□□□ -2.37
SCAPER-213ENST00000564757 CHD6Q8TD26 2715 aa0.26□□□□□ -2.37
SCAPER-213ENST00000564757 BIRC6Q9NR09 4857 aa0.26□□□□□ -2.37
SCAPER-213ENST00000564757 NSD1Q96L73 2696 aaPredicted RBP0.25□□□□□ -2.37
SCAPER-213ENST00000564757 C10orf142B7Z368 130 aa0.25□□□□□ -2.37
SCAPER-213ENST00000564757 Q5VSD8 79 aa0.25□□□□□ -2.37
SCAPER-213ENST00000564757 C14orf144Q96I85 54 aa0.25□□□□□ -2.37
SCAPER-213ENST00000564757 LINC01600Q96MT4 127 aa0.25□□□□□ -2.37
SCAPER-213ENST00000564757 SPRR4Q96PI1 79 aa0.25□□□□□ -2.37
SCAPER-213ENST00000564757 COL12A1Q99715 3063 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms