RNA–Protein interactions for RNA: ENST00000564757.5

SCAPER-213, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 626 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-213ENST00000564757 AEBP2Q6ZN18 517 aaPredicted RBP22.43■■□□□ 1.18
SCAPER-213ENST00000564757 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
SCAPER-213ENST00000564757 SENP3Q9H4L4 574 aaPredicted RBP19.14■□□□□ 0.65
SCAPER-213ENST00000564757 PHF23Q9BUL5 403 aaPredicted RBP18.87■□□□□ 0.61
SCAPER-213ENST00000564757 FOXD1Q16676 465 aa17.88■□□□□ 0.45
SCAPER-213ENST00000564757 MSH5O43196 834 aa16.78■□□□□ 0.28
SCAPER-213ENST00000564757 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
SCAPER-213ENST00000564757 POTEDQ86YR6 584 aa16.72■□□□□ 0.27
SCAPER-213ENST00000564757 PIAS4Q8N2W9 510 aaPredicted RBP16.68■□□□□ 0.26
SCAPER-213ENST00000564757 PPP6R1Q9UPN7 881 aa16.57■□□□□ 0.24
SCAPER-213ENST00000564757 ADRA2BP18089 450 aa16.52■□□□□ 0.24
SCAPER-213ENST00000564757 MAPK8IP2Q13387 824 aaPredicted RBP15.23■□□□□ 0.03
SCAPER-213ENST00000564757 DMRT2Q9Y5R5 561 aa15.15■□□□□ 0.02
SCAPER-213ENST00000564757 SCAF1Q9H7N4 1312 aaKnown RBP15.07■□□□□ 0
SCAPER-213ENST00000564757 PPP4R3CPQ6ZMV5 832 aa14.69□□□□□ -0.06
SCAPER-213ENST00000564757 DCAF8L1A6NGE4 600 aa14.57□□□□□ -0.08
SCAPER-213ENST00000564757 CACNB1Q02641 598 aaPredicted RBP14.53□□□□□ -0.08
SCAPER-213ENST00000564757 HOXD11P31277 338 aaPredicted RBP14.52□□□□□ -0.09
SCAPER-213ENST00000564757 CNKSR2Q8WXI2 1034 aa14.45□□□□□ -0.1
SCAPER-213ENST00000564757 RNF216Q9NWF9 866 aaPredicted RBP14.36□□□□□ -0.11
SCAPER-213ENST00000564757 RNF39Q9H2S5 420 aa14.31□□□□□ -0.12
SCAPER-213ENST00000564757 C1QBPQ07021 282 aaKnown RBP14.07□□□□□ -0.16
SCAPER-213ENST00000564757 NCBP3Q53F19 620 aaKnown RBP14.05□□□□□ -0.16
SCAPER-213ENST00000564757 DNAJC5BQ9UF47 199 aa14.02□□□□□ -0.17
SCAPER-213ENST00000564757 NPM3O75607 178 aaKnown RBP13.87□□□□□ -0.19
SCAPER-213ENST00000564757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.84□□□□□ -0.19
SCAPER-213ENST00000564757 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
SCAPER-213ENST00000564757 KCNA4P22459 653 aa13.45□□□□□ -0.26
SCAPER-213ENST00000564757 SPINK5Q9NQ38 1064 aaPredicted RBP13.41□□□□□ -0.26
SCAPER-213ENST00000564757 CAPN15O75808 1086 aa13.39□□□□□ -0.27
SCAPER-213ENST00000564757 DSG3P32926 999 aa13.35□□□□□ -0.27
SCAPER-213ENST00000564757 SLC4A2P04920 1241 aa13.3□□□□□ -0.28
SCAPER-213ENST00000564757 TRHP20396 242 aaPredicted RBP13.14□□□□□ -0.31
SCAPER-213ENST00000564757 APLP2Q06481 763 aa13.12□□□□□ -0.31
SCAPER-213ENST00000564757 ABCB7O75027 752 aa13.09□□□□□ -0.31
SCAPER-213ENST00000564757 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
SCAPER-213ENST00000564757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.06□□□□□ -0.32
SCAPER-213ENST00000564757 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
SCAPER-213ENST00000564757 POTEHQ6S545 545 aa13.06□□□□□ -0.32
SCAPER-213ENST00000564757 SAMD1Q6SPF0 538 aaPredicted RBP12.98□□□□□ -0.33
SCAPER-213ENST00000564757 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
SCAPER-213ENST00000564757 RBM42Q9BTD8 480 aaKnown RBP12.73□□□□□ -0.37
SCAPER-213ENST00000564757 POLA2Q14181 598 aa12.72□□□□□ -0.37
SCAPER-213ENST00000564757 SLC4A1APQ9BWU0 796 aaKnown RBP12.66□□□□□ -0.38
SCAPER-213ENST00000564757 FOXD4L1Q9NU39 408 aa12.61□□□□□ -0.39
SCAPER-213ENST00000564757 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
SCAPER-213ENST00000564757 CHRDL2Q6WN34 429 aa12.53□□□□□ -0.4
SCAPER-213ENST00000564757 ZBTB12Q9Y330 459 aaPredicted RBP12.44□□□□□ -0.42
SCAPER-213ENST00000564757 AKT1S1Q96B36 256 aa12.4□□□□□ -0.42
SCAPER-213ENST00000564757 ZBTB22O15209 634 aa12.37□□□□□ -0.43
SCAPER-213ENST00000564757 OSCARQ8IYS5 282 aa12.36□□□□□ -0.43
SCAPER-213ENST00000564757 REM2Q8IYK8 340 aaPredicted RBP12.29□□□□□ -0.44
SCAPER-213ENST00000564757 PIP4P2Q8N4L2 257 aa12.21□□□□□ -0.45
SCAPER-213ENST00000564757 ATXN8OSP0DMR3 200 aa12.2□□□□□ -0.46
SCAPER-213ENST00000564757 PITPNM1O00562 1244 aa12.18□□□□□ -0.46
SCAPER-213ENST00000564757 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
SCAPER-213ENST00000564757 FXR2P51116 673 aaKnown RBP eCLIP12.09□□□□□ -0.47
SCAPER-213ENST00000564757 FBLN2P98095 1184 aa12.07□□□□□ -0.48
SCAPER-213ENST00000564757 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
SCAPER-213ENST00000564757 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
SCAPER-213ENST00000564757 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
SCAPER-213ENST00000564757 HAX1O00165 279 aa12.03□□□□□ -0.48
SCAPER-213ENST00000564757 MKRN4PQ13434 485 aaPredicted RBP11.97□□□□□ -0.49
SCAPER-213ENST00000564757 CLEC11AQ9Y240 323 aa11.91□□□□□ -0.5
SCAPER-213ENST00000564757 SPDYE1Q8NFV5 336 aaPredicted RBP11.88□□□□□ -0.51
SCAPER-213ENST00000564757 ZNF692Q9BU19 519 aaPredicted RBP11.88□□□□□ -0.51
SCAPER-213ENST00000564757 EVX2Q03828 476 aa11.87□□□□□ -0.51
SCAPER-213ENST00000564757 SSUH2Q9Y2M2 353 aa11.87□□□□□ -0.51
SCAPER-213ENST00000564757 PRKAR2AP13861 404 aaKnown RBP11.86□□□□□ -0.51
SCAPER-213ENST00000564757 C19orf67A6NJJ6 358 aa11.71□□□□□ -0.53
SCAPER-213ENST00000564757 PABPN1Q86U42 306 aaKnown RBP eCLIP11.71□□□□□ -0.53
SCAPER-213ENST00000564757 CHADLQ6NUI6 762 aa11.7□□□□□ -0.54
SCAPER-213ENST00000564757 PRR29P0C7W0 189 aa11.66□□□□□ -0.54
SCAPER-213ENST00000564757 CSRNP3Q8WYN3 585 aa11.62□□□□□ -0.55
SCAPER-213ENST00000564757 GABBR2O75899 941 aa11.59□□□□□ -0.55
SCAPER-213ENST00000564757 FARP1Q9Y4F1 1045 aaPredicted RBP11.48□□□□□ -0.57
SCAPER-213ENST00000564757 CD44P16070 742 aaKnown RBP11.47□□□□□ -0.57
SCAPER-213ENST00000564757 EHMT2Q96KQ7 1210 aa11.4□□□□□ -0.58
SCAPER-213ENST00000564757 LHX8Q68G74 356 aa11.39□□□□□ -0.59
SCAPER-213ENST00000564757 POTEIP0CG38 1075 aa11.35□□□□□ -0.59
SCAPER-213ENST00000564757 CREBZFQ9NS37 354 aa11.33□□□□□ -0.6
SCAPER-213ENST00000564757 STAG3Q9UJ98 1225 aa11.32□□□□□ -0.6
SCAPER-213ENST00000564757 SPDYE4A6NLX3 237 aa11.31□□□□□ -0.6
SCAPER-213ENST00000564757 CLCN6P51797 869 aa11.29□□□□□ -0.6
SCAPER-213ENST00000564757 ZNF579Q8NAF0 562 aaKnown RBP11.28□□□□□ -0.6
SCAPER-213ENST00000564757 ZRANB1Q9UGI0 708 aa11.28□□□□□ -0.6
SCAPER-213ENST00000564757 DCBLD2Q96PD2 775 aa11.24□□□□□ -0.61
SCAPER-213ENST00000564757 GALR2O43603 387 aaPredicted RBP11.17□□□□□ -0.62
SCAPER-213ENST00000564757 PAK3O75914 559 aaPredicted RBP11.14□□□□□ -0.63
SCAPER-213ENST00000564757 PHF12Q96QT6 1004 aa11.12□□□□□ -0.63
SCAPER-213ENST00000564757 NPM1P06748 294 aaKnown RBP eCLIP11.1□□□□□ -0.63
SCAPER-213ENST00000564757 MNX1P50219 401 aaPredicted RBP11.1□□□□□ -0.63
SCAPER-213ENST00000564757 PROM2Q8N271 834 aa10.99□□□□□ -0.65
SCAPER-213ENST00000564757 POTEB2H3BUK9 544 aa10.98□□□□□ -0.65
SCAPER-213ENST00000564757 PLSCR2Q9NRY7 297 aa10.98□□□□□ -0.65
SCAPER-213ENST00000564757 MS4A3Q96HJ5 214 aa10.97□□□□□ -0.65
SCAPER-213ENST00000564757 PELP1Q8IZL8 1130 aaKnown RBP10.96□□□□□ -0.65
SCAPER-213ENST00000564757 OTUD5Q96G74 571 aa10.96□□□□□ -0.65
SCAPER-213ENST00000564757 TSPYL2Q9H2G4 693 aaPredicted RBP10.93□□□□□ -0.66
SCAPER-213ENST00000564757 ASTLQ6HA08 431 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 179.3 ms