RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 TMEM243Q9BU79 118 aa2.82□□□□□ -1.96
TGFB3-205ENST00000556507 PPDPFQ9H3Y8 114 aa2.82□□□□□ -1.96
TGFB3-205ENST00000556507 CDC42SE2Q9NRR3 84 aa2.82□□□□□ -1.96
TGFB3-205ENST00000556507 CDKN2A-AS1Q9UH64 79 aa2.82□□□□□ -1.96
TGFB3-205ENST00000556507 PRRC2AP48634 2157 aaKnown RBP2.82□□□□□ -1.96
TGFB3-205ENST00000556507 TRGV2A0A075B6R0 118 aa2.81□□□□□ -1.96
TGFB3-205ENST00000556507 TMEM262E9PQX1 116 aa2.81□□□□□ -1.96
TGFB3-205ENST00000556507 UBE2L6O14933 153 aa2.81□□□□□ -1.96
TGFB3-205ENST00000556507 GIG44P09565 113 aaPredicted RBP2.81□□□□□ -1.96
TGFB3-205ENST00000556507 IGHV4-30-4P0DP06 118 aa2.81□□□□□ -1.96
TGFB3-205ENST00000556507 HILS1P60008 231 aa2.81□□□□□ -1.96
TGFB3-205ENST00000556507 COX6A2Q02221 97 aa2.81□□□□□ -1.96
TGFB3-205ENST00000556507 GAGE4Q13068 117 aa2.81□□□□□ -1.96
TGFB3-205ENST00000556507 GAGE5Q13069 117 aa2.81□□□□□ -1.96
TGFB3-205ENST00000556507 Q1RN00 199 aa2.81□□□□□ -1.96
TGFB3-205ENST00000556507 RNASE13Q5GAN3 156 aaKnown RBP2.81□□□□□ -1.96
TGFB3-205ENST00000556507 ADAMTSL4-AS1Q5T5F5 129 aa2.81□□□□□ -1.96
TGFB3-205ENST00000556507 SFTA2Q6UW10 78 aa2.81□□□□□ -1.96
TGFB3-205ENST00000556507 NTM-AS1Q6ZSK4 140 aa2.81□□□□□ -1.96
TGFB3-205ENST00000556507 CSNK1G2-AS1Q8NCQ2 148 aa2.81□□□□□ -1.96
TGFB3-205ENST00000556507 NOP10Q9NPE3 64 aaKnown RBP2.81□□□□□ -1.96
TGFB3-205ENST00000556507 V9GYY9 64 aa2.81□□□□□ -1.96
TGFB3-205ENST00000556507 CACNA1BQ00975 2339 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 TRGV4A0A0C4DH28 118 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 TRBV10-2A0A0K0K1G8 114 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 PLAC8L1A1L4L8 177 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 SMIM9A6NGZ8 99 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 C9JAW5 83 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 H7C2G1 150 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 SLC25A20O43772 301 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 GAGE7O76087 117 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 GAGE12FP0CL80 117 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 GAGE12GP0CL81 117 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 GAGE12IP0CL82 117 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 LINC00694P0DN24 101 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 RPL35AP18077 110 aaKnown RBP2.8□□□□□ -1.96
TGFB3-205ENST00000556507 INSL3P51460 131 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 SEC61BP60468 96 aaKnown RBP2.8□□□□□ -1.96
TGFB3-205ENST00000556507 MTURNQ8N3F0 131 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 ANKRD29Q8N6D5 301 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 KIR2DL5BQ8NHK3 375 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 CARD19Q96LW7 228 aa2.8□□□□□ -1.96
TGFB3-205ENST00000556507 RELNP78509 3460 aa2.79□□□□□ -1.96
TGFB3-205ENST00000556507 MED13LQ71F56 2210 aa2.79□□□□□ -1.96
TGFB3-205ENST00000556507 TRBV6-8A0A0A6YYG3 113 aa2.79□□□□□ -1.96
TGFB3-205ENST00000556507 TRAV13-1A0A0B4J241 112 aa2.79□□□□□ -1.96
TGFB3-205ENST00000556507 SMIM1B2RUZ4 78 aa2.79□□□□□ -1.96
TGFB3-205ENST00000556507 F5H768 121 aa2.79□□□□□ -1.96
TGFB3-205ENST00000556507 H3BT86 120 aa2.79□□□□□ -1.96
TGFB3-205ENST00000556507 LINC00612Q8N6U2 182 aa2.79□□□□□ -1.96
TGFB3-205ENST00000556507 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.79□□□□□ -1.96
TGFB3-205ENST00000556507 LINC00308Q8TCZ7 52 aa2.79□□□□□ -1.96
TGFB3-205ENST00000556507 ZNF625Q96I27 306 aaPredicted RBP2.79□□□□□ -1.96
TGFB3-205ENST00000556507 ICOSQ9Y6W8 199 aa2.79□□□□□ -1.96
TGFB3-205ENST00000556507 CSMD1Q96PZ7 3565 aa2.79□□□□□ -1.96
TGFB3-205ENST00000556507 TPRP12270 2363 aaKnown RBP2.79□□□□□ -1.96
TGFB3-205ENST00000556507 SPTA1P02549 2419 aa2.78□□□□□ -1.96
TGFB3-205ENST00000556507 MEIG1Q5JSS6 88 aa2.78□□□□□ -1.96
TGFB3-205ENST00000556507 C9orf66Q5T8R8 295 aa2.78□□□□□ -1.96
TGFB3-205ENST00000556507 C2orf82Q6UX34 121 aa2.78□□□□□ -1.96
TGFB3-205ENST00000556507 LINC01561Q8N1V8 128 aa2.78□□□□□ -1.96
TGFB3-205ENST00000556507 AGRNO00468 2067 aa2.78□□□□□ -1.96
TGFB3-205ENST00000556507 ASH1LQ9NR48 2969 aaKnown RBP2.78□□□□□ -1.96
TGFB3-205ENST00000556507 CELSR1Q9NYQ6 3014 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 ITPR1Q14643 2758 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 SPTBN2O15020 2390 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 A0A087WZ39 114 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 TRAV13-2A0A0B4J235 113 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 IGHV3OR16-9A0A0B4J2B5 98 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 LOC100131303A0A0U1RQF7 123 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 LYRM9A8MSI8 78 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 IBA57-AS1B1ANH7 110 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 LST1O00453 97 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 COX7A2LO14548 114 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 LY6G6DO95868 133 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 NPC2P61916 151 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 GAGE6Q13070 117 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 SS18Q15532 418 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 DEFB121Q5J5C9 76 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 FAM222AQ5U5X8 452 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 SMIM29Q86T20 159 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 COX7B2Q8TF08 81 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 CHCHD5Q9BSY4 110 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 WFDC10AQ9H1F0 79 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 PRO0255Q9UI72 69 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.77□□□□□ -1.97
TGFB3-205ENST00000556507 IGF2RP11717 2491 aa2.77□□□□□ -1.97
TGFB3-205ENST00000556507 ATRXP46100 2492 aa2.76□□□□□ -1.97
TGFB3-205ENST00000556507 IGLV4-60A0A075B6I1 120 aa2.76□□□□□ -1.97
TGFB3-205ENST00000556507 LINC00959A0A1B0GUT2 108 aa2.76□□□□□ -1.97
TGFB3-205ENST00000556507 CRLF1O75462 422 aa2.76□□□□□ -1.97
TGFB3-205ENST00000556507 OXTP01178 125 aa2.76□□□□□ -1.97
TGFB3-205ENST00000556507 TRACP01848 142 aa2.76□□□□□ -1.97
TGFB3-205ENST00000556507 DEFB130BP0DP73 79 aa2.76□□□□□ -1.97
TGFB3-205ENST00000556507 DEFB130AP0DP74 79 aa2.76□□□□□ -1.97
TGFB3-205ENST00000556507 APOC4P55056 127 aa2.76□□□□□ -1.97
TGFB3-205ENST00000556507 XGP55808 180 aa2.76□□□□□ -1.97
TGFB3-205ENST00000556507 KRTAP10-3P60369 221 aa2.76□□□□□ -1.97
TGFB3-205ENST00000556507 SOSTDC1Q6X4U4 206 aa2.76□□□□□ -1.97
TGFB3-205ENST00000556507 DAND5Q8N907 189 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms