RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
TGFB3-205ENST00000556507 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
TGFB3-205ENST00000556507 SENP3Q9H4L4 574 aaPredicted RBP15.03■□□□□ -0
TGFB3-205ENST00000556507 PHF23Q9BUL5 403 aaPredicted RBP14.93□□□□□ -0.02
TGFB3-205ENST00000556507 FOXD1Q16676 465 aa13.96□□□□□ -0.17
TGFB3-205ENST00000556507 PLPPR3Q6T4P5 718 aa13.74□□□□□ -0.21
TGFB3-205ENST00000556507 PPP6R1Q9UPN7 881 aa13.26□□□□□ -0.29
TGFB3-205ENST00000556507 ADRA2BP18089 450 aa13.24□□□□□ -0.29
TGFB3-205ENST00000556507 PIAS4Q8N2W9 510 aaPredicted RBP13.13□□□□□ -0.31
TGFB3-205ENST00000556507 MSH5O43196 834 aa12.98□□□□□ -0.33
TGFB3-205ENST00000556507 POTEDQ86YR6 584 aa12.2□□□□□ -0.46
TGFB3-205ENST00000556507 SCAF1Q9H7N4 1312 aaKnown RBP12.14□□□□□ -0.47
TGFB3-205ENST00000556507 MAPK8IP2Q13387 824 aaPredicted RBP12.08□□□□□ -0.48
TGFB3-205ENST00000556507 PPP4R3CPQ6ZMV5 832 aa12.08□□□□□ -0.48
TGFB3-205ENST00000556507 DMRT2Q9Y5R5 561 aa11.95□□□□□ -0.5
TGFB3-205ENST00000556507 CNKSR2Q8WXI2 1034 aa11.79□□□□□ -0.52
TGFB3-205ENST00000556507 NCBP3Q53F19 620 aaKnown RBP11.72□□□□□ -0.53
TGFB3-205ENST00000556507 HOXD11P31277 338 aaPredicted RBP11.61□□□□□ -0.55
TGFB3-205ENST00000556507 RNF216Q9NWF9 866 aaPredicted RBP11.61□□□□□ -0.55
TGFB3-205ENST00000556507 KCNA4P22459 653 aa11.54□□□□□ -0.56
TGFB3-205ENST00000556507 NPM3O75607 178 aaKnown RBP11.52□□□□□ -0.57
TGFB3-205ENST00000556507 DCAF8L1A6NGE4 600 aa11.49□□□□□ -0.57
TGFB3-205ENST00000556507 DNAJC5BQ9UF47 199 aa11.19□□□□□ -0.62
TGFB3-205ENST00000556507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.1□□□□□ -0.63
TGFB3-205ENST00000556507 RNF39Q9H2S5 420 aa11.08□□□□□ -0.64
TGFB3-205ENST00000556507 CACNB1Q02641 598 aaPredicted RBP10.99□□□□□ -0.65
TGFB3-205ENST00000556507 SLC4A1APQ9BWU0 796 aaKnown RBP10.96□□□□□ -0.65
TGFB3-205ENST00000556507 C1QBPQ07021 282 aaKnown RBP10.95□□□□□ -0.66
TGFB3-205ENST00000556507 SLC4A2P04920 1241 aa10.92□□□□□ -0.66
TGFB3-205ENST00000556507 U3KPZ7 1027 aaPredicted RBP10.86□□□□□ -0.67
TGFB3-205ENST00000556507 FOXD4L1Q9NU39 408 aa10.69□□□□□ -0.7
TGFB3-205ENST00000556507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.68□□□□□ -0.7
TGFB3-205ENST00000556507 HNRNPUL2Q1KMD3 747 aaKnown RBP10.68□□□□□ -0.7
TGFB3-205ENST00000556507 MYCNP04198 464 aaPredicted RBP10.66□□□□□ -0.7
TGFB3-205ENST00000556507 SPINK5Q9NQ38 1064 aaPredicted RBP10.64□□□□□ -0.71
TGFB3-205ENST00000556507 APLP2Q06481 763 aa10.63□□□□□ -0.71
TGFB3-205ENST00000556507 SAMD1Q6SPF0 538 aaPredicted RBP10.63□□□□□ -0.71
TGFB3-205ENST00000556507 CAPN15O75808 1086 aa10.62□□□□□ -0.71
TGFB3-205ENST00000556507 ZBTB22O15209 634 aa10.59□□□□□ -0.71
TGFB3-205ENST00000556507 TRHP20396 242 aaPredicted RBP10.52□□□□□ -0.73
TGFB3-205ENST00000556507 ZNF219Q9P2Y4 722 aaPredicted RBP10.5□□□□□ -0.73
TGFB3-205ENST00000556507 DSG3P32926 999 aa10.47□□□□□ -0.73
TGFB3-205ENST00000556507 ABCB7O75027 752 aa10.4□□□□□ -0.74
TGFB3-205ENST00000556507 EHMT2Q96KQ7 1210 aa10.4□□□□□ -0.74
TGFB3-205ENST00000556507 ATF5Q9Y2D1 282 aaPredicted RBP10.38□□□□□ -0.75
TGFB3-205ENST00000556507 CSRNP3Q8WYN3 585 aa10.37□□□□□ -0.75
TGFB3-205ENST00000556507 ATXN8OSP0DMR3 200 aa10.33□□□□□ -0.76
TGFB3-205ENST00000556507 POLA2Q14181 598 aa10.3□□□□□ -0.76
TGFB3-205ENST00000556507 ZBTB12Q9Y330 459 aaPredicted RBP10.11□□□□□ -0.79
TGFB3-205ENST00000556507 RBM42Q9BTD8 480 aaKnown RBP10.01□□□□□ -0.81
TGFB3-205ENST00000556507 FBLN2P98095 1184 aa9.99□□□□□ -0.81
TGFB3-205ENST00000556507 OSCARQ8IYS5 282 aa9.94□□□□□ -0.82
TGFB3-205ENST00000556507 MKRN4PQ13434 485 aaPredicted RBP9.91□□□□□ -0.82
TGFB3-205ENST00000556507 AKT1S1Q96B36 256 aa9.83□□□□□ -0.84
TGFB3-205ENST00000556507 SPDYE2BA6NHP3 402 aa9.81□□□□□ -0.84
TGFB3-205ENST00000556507 SPDYE6P0CI01 402 aa9.81□□□□□ -0.84
TGFB3-205ENST00000556507 SPDYE2Q495Y8 402 aa9.81□□□□□ -0.84
TGFB3-205ENST00000556507 ZNF692Q9BU19 519 aaPredicted RBP9.75□□□□□ -0.85
TGFB3-205ENST00000556507 REM2Q8IYK8 340 aaPredicted RBP9.73□□□□□ -0.85
TGFB3-205ENST00000556507 SSUH2Q9Y2M2 353 aa9.69□□□□□ -0.86
TGFB3-205ENST00000556507 CHRDL2Q6WN34 429 aa9.67□□□□□ -0.86
TGFB3-205ENST00000556507 POTEHQ6S545 545 aa9.62□□□□□ -0.87
TGFB3-205ENST00000556507 PITPNM1O00562 1244 aa9.61□□□□□ -0.87
TGFB3-205ENST00000556507 PABPN1Q86U42 306 aaKnown RBP eCLIP9.61□□□□□ -0.87
TGFB3-205ENST00000556507 SPDYE4A6NLX3 237 aa9.6□□□□□ -0.87
TGFB3-205ENST00000556507 SPDYE1Q8NFV5 336 aaPredicted RBP9.58□□□□□ -0.88
TGFB3-205ENST00000556507 CLEC11AQ9Y240 323 aa9.57□□□□□ -0.88
TGFB3-205ENST00000556507 PIP4P2Q8N4L2 257 aa9.49□□□□□ -0.89
TGFB3-205ENST00000556507 FXR2P51116 673 aaKnown RBP eCLIP9.48□□□□□ -0.89
TGFB3-205ENST00000556507 PRR29P0C7W0 189 aa9.45□□□□□ -0.9
TGFB3-205ENST00000556507 STAG3Q9UJ98 1225 aa9.42□□□□□ -0.9
TGFB3-205ENST00000556507 FKBP8Q14318 412 aa9.4□□□□□ -0.9
TGFB3-205ENST00000556507 PRKAR2AP13861 404 aaKnown RBP9.39□□□□□ -0.91
TGFB3-205ENST00000556507 PROM2Q8N271 834 aa9.38□□□□□ -0.91
TGFB3-205ENST00000556507 CHADLQ6NUI6 762 aa9.33□□□□□ -0.92
TGFB3-205ENST00000556507 HAX1O00165 279 aa9.28□□□□□ -0.92
TGFB3-205ENST00000556507 CREBZFQ9NS37 354 aa9.24□□□□□ -0.93
TGFB3-205ENST00000556507 FARP1Q9Y4F1 1045 aaPredicted RBP9.23□□□□□ -0.93
TGFB3-205ENST00000556507 C19orf67A6NJJ6 358 aa9.16□□□□□ -0.94
TGFB3-205ENST00000556507 EVX2Q03828 476 aa9.15□□□□□ -0.94
TGFB3-205ENST00000556507 MIER1Q8N108 512 aa9.15□□□□□ -0.94
TGFB3-205ENST00000556507 FBXO3Q9UK99 471 aa9.15□□□□□ -0.94
TGFB3-205ENST00000556507 PLEKHG5O94827 1062 aa9.14□□□□□ -0.95
TGFB3-205ENST00000556507 SP7Q8TDD2 431 aaPredicted RBP9.14□□□□□ -0.95
TGFB3-205ENST00000556507 NPM1P06748 294 aaKnown RBP eCLIP9.11□□□□□ -0.95
TGFB3-205ENST00000556507 MNX1P50219 401 aaPredicted RBP9.11□□□□□ -0.95
TGFB3-205ENST00000556507 PLCD3Q8N3E9 789 aa9.11□□□□□ -0.95
TGFB3-205ENST00000556507 CD44P16070 742 aaKnown RBP9.1□□□□□ -0.95
TGFB3-205ENST00000556507 PAK3O75914 559 aaPredicted RBP9.03□□□□□ -0.96
TGFB3-205ENST00000556507 ZRANB1Q9UGI0 708 aa9.03□□□□□ -0.96
TGFB3-205ENST00000556507 ZBTB47Q9UFB7 747 aaPredicted RBP9.02□□□□□ -0.97
TGFB3-205ENST00000556507 VASPP50552 380 aaPredicted RBP9□□□□□ -0.97
TGFB3-205ENST00000556507 GABBR2O75899 941 aa8.97□□□□□ -0.97
TGFB3-205ENST00000556507 ZNF579Q8NAF0 562 aaKnown RBP8.96□□□□□ -0.98
TGFB3-205ENST00000556507 TSPYL2Q9H2G4 693 aaPredicted RBP8.96□□□□□ -0.98
TGFB3-205ENST00000556507 CLCN6P51797 869 aa8.94□□□□□ -0.98
TGFB3-205ENST00000556507 KLHL34Q8N239 644 aa8.94□□□□□ -0.98
TGFB3-205ENST00000556507 RASEFQ8IZ41 740 aa8.93□□□□□ -0.98
TGFB3-205ENST00000556507 PHF12Q96QT6 1004 aa8.91□□□□□ -0.98
TGFB3-205ENST00000556507 NUBP1P53384 320 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms