RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 C12orf73Q69YU5 71 aa2.42□□□□□ -2.02
CPNE3-206ENST00000523469 DNAJC9Q8WXX5 260 aa2.42□□□□□ -2.02
CPNE3-206ENST00000523469 HIST1H2BAQ96A08 127 aa2.42□□□□□ -2.02
CPNE3-206ENST00000523469 UBE2WQ96B02 151 aa2.42□□□□□ -2.02
CPNE3-206ENST00000523469 ARHGAP5-AS1Q96IT6 56 aa2.42□□□□□ -2.02
CPNE3-206ENST00000523469 TMEM126AQ9H061 195 aa2.42□□□□□ -2.02
CPNE3-206ENST00000523469 LAMTOR3Q9UHA4 124 aa2.42□□□□□ -2.02
CPNE3-206ENST00000523469 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 SYNE2Q8WXH0 6885 aaKnown RBP2.41□□□□□ -2.02
CPNE3-206ENST00000523469 IGLV10-54A0A075B6I4 117 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 TRBV24-1A0A075B6N3 115 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 TRAV30A0A087WSZ9 112 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 A0A1B0GX51 115 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 GGTLC3B5MD39 225 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 J3KT08 172 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 CORTO00230 105 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 UBE2L6O14933 153 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 SLC25A20O43772 301 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 IGKV1-5P01602 117 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 HIST1H2BOP23527 126 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 HIST1H2BBP33778 126 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 SNCAP37840 140 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 ZNF80P51504 273 aaPredicted RBP2.41□□□□□ -2.02
CPNE3-206ENST00000523469 HIST1H2BDP58876 126 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 HIST1H2BCP62807 126 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 HIST2H2BEQ16778 126 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.41□□□□□ -2.02
CPNE3-206ENST00000523469 LYRM7Q5U5X0 104 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 RPL22L1Q6P5R6 122 aaKnown RBP2.41□□□□□ -2.02
CPNE3-206ENST00000523469 HIST1H2BHQ93079 126 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 HIST1H2BNQ99877 126 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 HIST1H2BMQ99879 126 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 C11orf1Q9H5F2 150 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 FKBP11Q9NYL4 201 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 TRAPPC1Q9Y5R8 145 aa2.41□□□□□ -2.02
CPNE3-206ENST00000523469 SYNGR2O43760 224 aa2.4□□□□□ -2.03
CPNE3-206ENST00000523469 EDF1O60869 148 aaKnown RBP2.4□□□□□ -2.03
CPNE3-206ENST00000523469 CSN1S1P47710 185 aa2.4□□□□□ -2.03
CPNE3-206ENST00000523469 SUPT4H1P63272 117 aaKnown RBP2.4□□□□□ -2.03
CPNE3-206ENST00000523469 KRTAP25-1Q3LHN0 102 aa2.4□□□□□ -2.03
CPNE3-206ENST00000523469 SPINK9Q5DT21 86 aa2.4□□□□□ -2.03
CPNE3-206ENST00000523469 AADACL3Q5VUY0 350 aa2.4□□□□□ -2.03
CPNE3-206ENST00000523469 RASL11AQ6T310 242 aa2.4□□□□□ -2.03
CPNE3-206ENST00000523469 DPPA3Q6W0C5 159 aa2.4□□□□□ -2.03
CPNE3-206ENST00000523469 LCA10Q71F78 164 aa2.4□□□□□ -2.03
CPNE3-206ENST00000523469 KTN1-AS1Q86SY8 53 aa2.4□□□□□ -2.03
CPNE3-206ENST00000523469 OR8I2Q8N0Y5 310 aa2.4□□□□□ -2.03
CPNE3-206ENST00000523469 C3orf22Q8N5N4 141 aa2.4□□□□□ -2.03
CPNE3-206ENST00000523469 OR5C1Q8NGR4 320 aa2.4□□□□□ -2.03
CPNE3-206ENST00000523469 CARD19Q96LW7 228 aa2.4□□□□□ -2.03
CPNE3-206ENST00000523469 MRPL32Q9BYC8 188 aaKnown RBP2.4□□□□□ -2.03
CPNE3-206ENST00000523469 LPAR5Q9H1C0 372 aa2.4□□□□□ -2.03
CPNE3-206ENST00000523469 MRPL16Q9NX20 251 aaKnown RBP2.4□□□□□ -2.03
CPNE3-206ENST00000523469 IL36BQ9NZH7 164 aa2.4□□□□□ -2.03
CPNE3-206ENST00000523469 MRPL36Q9P0J6 103 aaKnown RBP2.4□□□□□ -2.03
CPNE3-206ENST00000523469 COPZ2Q9P299 210 aa2.4□□□□□ -2.03
CPNE3-206ENST00000523469 MUC17Q685J3 4493 aa2.4□□□□□ -2.03
CPNE3-206ENST00000523469 ZNF73O43830 326 aaPredicted RBP2.39□□□□□ -2.03
CPNE3-206ENST00000523469 LPAR6P43657 344 aa2.39□□□□□ -2.03
CPNE3-206ENST00000523469 TAS2R20P59543 309 aa2.39□□□□□ -2.03
CPNE3-206ENST00000523469 XAF1Q6GPH4 301 aa2.39□□□□□ -2.03
CPNE3-206ENST00000523469 C9orf163Q8N9P6 203 aa2.39□□□□□ -2.03
CPNE3-206ENST00000523469 OR5A1Q8NGJ0 315 aa2.39□□□□□ -2.03
CPNE3-206ENST00000523469 Q8TAT8 98 aa2.39□□□□□ -2.03
CPNE3-206ENST00000523469 DERL1Q9BUN8 251 aa2.39□□□□□ -2.03
CPNE3-206ENST00000523469 LAMTOR2Q9Y2Q5 125 aa2.39□□□□□ -2.03
CPNE3-206ENST00000523469 FCGBPQ9Y6R7 5405 aaPredicted RBP2.39□□□□□ -2.03
CPNE3-206ENST00000523469 TRAV12-3A0A0B4J271 114 aa2.38□□□□□ -2.03
CPNE3-206ENST00000523469 A0A0B4J2C4 111 aa2.38□□□□□ -2.03
CPNE3-206ENST00000523469 PNMA8CA0A1B0GUJ8 204 aa2.38□□□□□ -2.03
CPNE3-206ENST00000523469 SFTA3P0C7M3 94 aa2.38□□□□□ -2.03
CPNE3-206ENST00000523469 IGLC1P0CG04 106 aa2.38□□□□□ -2.03
CPNE3-206ENST00000523469 BCL2P10415 239 aa2.38□□□□□ -2.03
CPNE3-206ENST00000523469 UBE2D1P51668 147 aa2.38□□□□□ -2.03
CPNE3-206ENST00000523469 YPEL3P61236 119 aaPredicted RBP2.38□□□□□ -2.03
CPNE3-206ENST00000523469 CIRBPQ14011 172 aaKnown RBP2.38□□□□□ -2.03
CPNE3-206ENST00000523469 HRCT1Q6UXD1 115 aa2.38□□□□□ -2.03
CPNE3-206ENST00000523469 LYZL2Q7Z4W2 148 aa2.38□□□□□ -2.03
CPNE3-206ENST00000523469 TMEM229BQ8NBD8 167 aa2.38□□□□□ -2.03
CPNE3-206ENST00000523469 SPACA4Q8TDM5 124 aa2.38□□□□□ -2.03
CPNE3-206ENST00000523469 MGLLQ99685 303 aa2.38□□□□□ -2.03
CPNE3-206ENST00000523469 XAGE1AQ9HD64 81 aa2.38□□□□□ -2.03
CPNE3-206ENST00000523469 PLAC8Q9NZF1 115 aa2.38□□□□□ -2.03
CPNE3-206ENST00000523469 HSPB8Q9UJY1 196 aa2.38□□□□□ -2.03
CPNE3-206ENST00000523469 USH2AO75445 5202 aa2.38□□□□□ -2.03
CPNE3-206ENST00000523469 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
CPNE3-206ENST00000523469 IGHV3-64A0A075B6Q5 118 aa2.37□□□□□ -2.03
CPNE3-206ENST00000523469 TRAV1-1A0A0B4J248 108 aa2.37□□□□□ -2.03
CPNE3-206ENST00000523469 CRYM-AS1A6NIL9 109 aa2.37□□□□□ -2.03
CPNE3-206ENST00000523469 LEPROTO15243 131 aa2.37□□□□□ -2.03
CPNE3-206ENST00000523469 SPINK4O60575 86 aa2.37□□□□□ -2.03
CPNE3-206ENST00000523469 S100A11P31949 105 aa2.37□□□□□ -2.03
CPNE3-206ENST00000523469 TAS2R30P59541 319 aa2.37□□□□□ -2.03
CPNE3-206ENST00000523469 FXYD4P59646 89 aa2.37□□□□□ -2.03
CPNE3-206ENST00000523469 KRTAP20-1Q3LI63 56 aa2.37□□□□□ -2.03
CPNE3-206ENST00000523469 SDIM1Q6ZPB5 146 aa2.37□□□□□ -2.03
CPNE3-206ENST00000523469 Q6ZQT7 251 aa2.37□□□□□ -2.03
CPNE3-206ENST00000523469 CANT1Q8WVQ1 401 aa2.37□□□□□ -2.03
CPNE3-206ENST00000523469 VPS25Q9BRG1 176 aa2.37□□□□□ -2.03
CPNE3-206ENST00000523469 PDCD10Q9BUL8 212 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms