RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 RBMY1EA6NEQ0 496 aaKnown RBP2.79□□□□□ -1.96
CLTC-209ENST00000498711 H3BMM0 161 aa2.79□□□□□ -1.96
CLTC-209ENST00000498711 ACYP1P07311 99 aa2.79□□□□□ -1.96
CLTC-209ENST00000498711 RBMY1DP0C7P1 496 aaKnown RBP2.79□□□□□ -1.96
CLTC-209ENST00000498711 RPL35AP18077 110 aaKnown RBP2.79□□□□□ -1.96
CLTC-209ENST00000498711 SEC61GP60059 68 aa2.79□□□□□ -1.96
CLTC-209ENST00000498711 SNRPD3P62318 126 aaKnown RBP2.79□□□□□ -1.96
CLTC-209ENST00000498711 KRTAP15-1Q3LI76 137 aa2.79□□□□□ -1.96
CLTC-209ENST00000498711 UBE2WQ96B02 151 aa2.79□□□□□ -1.96
CLTC-209ENST00000498711 APCP25054 2843 aa2.78□□□□□ -1.96
CLTC-209ENST00000498711 AKAP9Q99996 3911 aa2.78□□□□□ -1.96
CLTC-209ENST00000498711 ANKRD17O75179 2603 aaKnown RBP2.78□□□□□ -1.96
CLTC-209ENST00000498711 MSMBP08118 114 aa2.78□□□□□ -1.96
CLTC-209ENST00000498711 ZNF56Q15929 161 aa2.78□□□□□ -1.96
CLTC-209ENST00000498711 BRD3OSQ6XYD6 125 aa2.78□□□□□ -1.96
CLTC-209ENST00000498711 UBE2E2Q96LR5 201 aa2.78□□□□□ -1.96
CLTC-209ENST00000498711 NDUFA12Q9UI09 145 aa2.78□□□□□ -1.96
CLTC-209ENST00000498711 WNK2Q9Y3S1 2297 aa2.78□□□□□ -1.96
CLTC-209ENST00000498711 MXRA5Q9NR99 2828 aa2.78□□□□□ -1.96
CLTC-209ENST00000498711 TEX49A0A1B0GTD5 131 aa2.78□□□□□ -1.96
CLTC-209ENST00000498711 B4DSR2 109 aa2.78□□□□□ -1.96
CLTC-209ENST00000498711 FAM222AQ5U5X8 452 aa2.78□□□□□ -1.96
CLTC-209ENST00000498711 Q6ZVQ6 151 aa2.78□□□□□ -1.96
CLTC-209ENST00000498711 ZNF625Q96I27 306 aaPredicted RBP2.78□□□□□ -1.96
CLTC-209ENST00000498711 TMEM101Q96IK0 257 aa2.78□□□□□ -1.96
CLTC-209ENST00000498711 ANAPC13Q9BS18 74 aa2.78□□□□□ -1.96
CLTC-209ENST00000498711 KRTAP4-11Q9BYQ6 195 aa2.78□□□□□ -1.96
CLTC-209ENST00000498711 TRAV12-2A0A075B6T6 113 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 IGHV3OR16-10A0A075B7F0 116 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 F5H768 121 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 TRACP01848 142 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 CD28P10747 220 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 LY6EQ16553 131 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 SFTA2Q6UW10 78 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 C2orf82Q6UX34 121 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.77□□□□□ -1.97
CLTC-209ENST00000498711 C15orf53Q8NAA6 179 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 OBSCN-AS1Q96MR7 158 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 ZNF702PQ9H963 129 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 TEX15Q9BXT5 2789 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 TRAV8-3A0A0A6YYJ7 113 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 COX7A2LO14548 114 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 SNCGO76070 127 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 SPINK13Q1W4C9 94 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 C5orf38Q86SI9 138 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 LINC00308Q8TCZ7 52 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 KRTAP9-8Q9BYQ0 159 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 ABCA1O95477 2261 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 ITPR2Q14571 2701 aa2.77□□□□□ -1.97
CLTC-209ENST00000498711 IGHV3OR16-12A0A075B7B8 117 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 IGHV4-30-2A0A087WSY4 118 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 COX6CP09669 75 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 COX6A2Q02221 97 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 LINC00242Q5T6M2 205 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 SOSTDC1Q6X4U4 206 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 LINC01587Q99440 93 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 TNFRSF18Q9Y5U5 241 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 HECTD1Q9ULT8 2610 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 CCDC179H3BU77 68 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 CXCL5P42830 114 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 HIST1H4AP62805 103 aaKnown RBP2.76□□□□□ -1.97
CLTC-209ENST00000498711 HERVK_113P63121 156 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 DEFB112Q30KQ8 113 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 FAM74A4Q5TZK3 123 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 DAND5Q8N907 189 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 MAPK1IP1LQ8NDC0 245 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 COPS9Q8WXC6 57 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 C2orf48Q96LS8 159 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 Q9UF83 564 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 MAST4O15021 2626 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 NF1P21359 2839 aa2.76□□□□□ -1.97
CLTC-209ENST00000498711 TRBV10-1A0A0K0K1A3 114 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 SMIM1B2RUZ4 78 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 SLPIP03973 132 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 ATP5G1P05496 136 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 RPL28P46779 137 aaKnown RBP2.75□□□□□ -1.97
CLTC-209ENST00000498711 CEMP1Q6PRD7 247 aaPredicted RBP2.75□□□□□ -1.97
CLTC-209ENST00000498711 C10orf99Q6UWK7 81 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 DUX5Q96PT3 197 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 CDKN2A-AS1Q9UH64 79 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 ABCA2Q9BZC7 2435 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 TRAV25A0A0B4J276 109 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 LINC00694P0DN24 101 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 HILS1P60008 231 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 TTC32Q5I0X7 151 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 LINC00643Q86TS7 51 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 CLEC2BQ92478 149 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 CCDC168Q8NDH2 2452 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 IGKV3-7A0A075B6H7 116 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 IGHV3-64A0A075B6Q5 118 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 KNCNA6PVL3 124 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 SYNJ2BPP57105 145 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 LCE5AQ5TCM9 118 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 NTM-AS1Q6ZSK4 140 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 LINC01561Q8N1V8 128 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 DEFB104AQ8WTQ1 72 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 TMEM126AQ9H061 195 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 CDC42SE2Q9NRR3 84 aa2.75□□□□□ -1.97
CLTC-209ENST00000498711 TLN2Q9Y4G6 2542 aa2.74□□□□□ -1.97
CLTC-209ENST00000498711 SETXQ7Z333 2677 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms