RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 DLEU1O43261 78 aa-0.16□□□□□ -2.44
PSPC1-205ENST00000497722 APOC3P02656 99 aa-0.16□□□□□ -2.44
PSPC1-205ENST00000497722 SPRR2DP22532 72 aa-0.16□□□□□ -2.44
PSPC1-205ENST00000497722 MT4P47944 62 aa-0.16□□□□□ -2.44
PSPC1-205ENST00000497722 Q6JHZ5 121 aa-0.16□□□□□ -2.44
PSPC1-205ENST00000497722 MRPL54Q6P161 138 aaKnown RBP-0.16□□□□□ -2.44
PSPC1-205ENST00000497722 CDC42SE2Q9NRR3 84 aa-0.16□□□□□ -2.44
PSPC1-205ENST00000497722 NSD3Q9BZ95 1437 aa-0.16□□□□□ -2.44
PSPC1-205ENST00000497722 PKDREJQ9NTG1 2253 aa-0.16□□□□□ -2.44
PSPC1-205ENST00000497722 SPHKAPQ2M3C7 1700 aa-0.16□□□□□ -2.44
PSPC1-205ENST00000497722 ACANP16112 2415 aa-0.16□□□□□ -2.44
PSPC1-205ENST00000497722 PCLOQ9Y6V0 5065 aa-0.16□□□□□ -2.44
PSPC1-205ENST00000497722 MRC2Q9UBG0 1479 aa-0.16□□□□□ -2.44
PSPC1-205ENST00000497722 SHANK2Q9UPX8 1470 aa-0.16□□□□□ -2.44
PSPC1-205ENST00000497722 USF3Q68DE3 2245 aa-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 SPTBN1Q01082 2364 aaKnown RBP-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 VWFP04275 2813 aa-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 MAP1AP78559 2803 aaPredicted RBP-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 MAPKBP1O60336 1514 aa-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 UBE2L5PA0A1B0GUS4 154 aa-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 CHD1O14646 1710 aa-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 S100A3P33764 101 aa-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 SPRR1AP35321 89 aa-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 MAP1BP46821 2468 aaKnown RBP-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 ATP5EP56381 51 aaPredicted RBP-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 UBE2L3P68036 154 aaKnown RBP-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 KRTAP20-1Q3LI63 56 aa-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 C9orf153Q5TBE3 101 aa-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 SPRR4Q96PI1 79 aa-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 PIEZO2Q9H5I5 2752 aa-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 IER3IP1Q9Y5U9 82 aa-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 PRKDCP78527 4128 aaKnown RBP-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 EP300Q09472 2414 aaPredicted RBP-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 TSC2P49815 1807 aa-0.17□□□□□ -2.44
PSPC1-205ENST00000497722 PKHD1P08F94 4074 aa-0.18□□□□□ -2.44
PSPC1-205ENST00000497722 ARHGEF12Q9NZN5 1544 aa-0.18□□□□□ -2.44
PSPC1-205ENST00000497722 NBEAL1Q6ZS30 2694 aa-0.18□□□□□ -2.44
PSPC1-205ENST00000497722 NUP188Q5SRE5 1749 aa-0.18□□□□□ -2.44
PSPC1-205ENST00000497722 TRBV6-1A0A0K0K1D8 114 aa-0.18□□□□□ -2.44
PSPC1-205ENST00000497722 A0A1B0GV90 55 aa-0.18□□□□□ -2.44
PSPC1-205ENST00000497722 SFT2D2O95562 160 aa-0.18□□□□□ -2.44
PSPC1-205ENST00000497722 SARNPP82979 210 aaKnown RBP-0.18□□□□□ -2.44
PSPC1-205ENST00000497722 DEFB123Q8N688 67 aa-0.18□□□□□ -2.44
PSPC1-205ENST00000497722 MYOZ3Q8TDC0 251 aa-0.18□□□□□ -2.44
PSPC1-205ENST00000497722 FAM167A-AS1Q96KT0 104 aa-0.18□□□□□ -2.44
PSPC1-205ENST00000497722 DPH3P1Q9H4G8 78 aa-0.18□□□□□ -2.44
PSPC1-205ENST00000497722 MAGI1Q96QZ7 1491 aaPredicted RBP-0.18□□□□□ -2.44
PSPC1-205ENST00000497722 WDR7Q9Y4E6 1490 aa-0.18□□□□□ -2.44
PSPC1-205ENST00000497722 TOPAZ1Q8N9V7 1692 aa-0.18□□□□□ -2.44
PSPC1-205ENST00000497722 FAM135AQ9P2D6 1515 aa-0.18□□□□□ -2.44
PSPC1-205ENST00000497722 SCAPERQ9BY12 1400 aa-0.19□□□□□ -2.44
PSPC1-205ENST00000497722 CC2D2AQ9P2K1 1620 aa-0.19□□□□□ -2.44
PSPC1-205ENST00000497722 FLNBO75369 2602 aaKnown RBP-0.19□□□□□ -2.44
PSPC1-205ENST00000497722 GNG4P50150 75 aa-0.19□□□□□ -2.44
PSPC1-205ENST00000497722 DCDP81605 110 aaKnown RBP-0.19□□□□□ -2.44
PSPC1-205ENST00000497722 RYR3Q15413 4870 aa-0.19□□□□□ -2.44
PSPC1-205ENST00000497722 TOP2BQ02880 1626 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 LRP1BQ9NZR2 4599 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 PZPP20742 1482 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 GVINP1Q7Z2Y8 2422 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 CHKB-CPT1BH3BT56 60 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 CORTO00230 105 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 PRM1P04553 51 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 MGPP08493 103 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 SPRR2BP35325 72 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 UBE2D3P61077 147 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 UBE2D2P62837 147 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 PIGYQ3MUY2 71 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 TMEM263Q8WUH6 116 aaKnown RBP-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 C2orf88Q9BSF0 95 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 NXT2Q9NPJ8 142 aaKnown RBP-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 ARHGAP5Q13017 1502 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 NF1P21359 2839 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 FLGP20930 4061 aaPredicted RBP-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 HERC2O95714 4834 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 HERC1Q15751 4861 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 LAMA5O15230 3695 aa-0.2□□□□□ -2.44
PSPC1-205ENST00000497722 ADGRL2O95490 1459 aa-0.21□□□□□ -2.44
PSPC1-205ENST00000497722 GAPVD1Q14C86 1478 aa-0.21□□□□□ -2.44
PSPC1-205ENST00000497722 SETD2Q9BYW2 2564 aaPredicted RBP-0.21□□□□□ -2.44
PSPC1-205ENST00000497722 FAM24AA6NFZ4 105 aa-0.21□□□□□ -2.44
PSPC1-205ENST00000497722 F6UZH7 168 aa-0.21□□□□□ -2.44
PSPC1-205ENST00000497722 IGLC1P0CG04 106 aa-0.21□□□□□ -2.44
PSPC1-205ENST00000497722 UQCR10Q9UDW1 63 aa-0.21□□□□□ -2.44
PSPC1-205ENST00000497722 KIAA0556O60303 1618 aa-0.21□□□□□ -2.44
PSPC1-205ENST00000497722 USH2AO75445 5202 aa-0.21□□□□□ -2.44
PSPC1-205ENST00000497722 CHD8Q9HCK8 2581 aa-0.21□□□□□ -2.44
PSPC1-205ENST00000497722 COL4A6Q14031 1691 aa-0.21□□□□□ -2.44
PSPC1-205ENST00000497722 ATRQ13535 2644 aa-0.21□□□□□ -2.44
PSPC1-205ENST00000497722 XRN1Q8IZH2 1706 aaKnown RBP-0.21□□□□□ -2.44
PSPC1-205ENST00000497722 ABCA3Q99758 1704 aa-0.21□□□□□ -2.44
PSPC1-205ENST00000497722 NCOA3Q9Y6Q9 1424 aa-0.21□□□□□ -2.44
PSPC1-205ENST00000497722 DOPEY1Q5JWR5 2465 aa-0.22□□□□□ -2.44
PSPC1-205ENST00000497722 RYR1P21817 5038 aa-0.22□□□□□ -2.44
PSPC1-205ENST00000497722 CSPG4Q6UVK1 2322 aa-0.22□□□□□ -2.44
PSPC1-205ENST00000497722 LOC730098B7Z3J9 87 aa-0.22□□□□□ -2.44
PSPC1-205ENST00000497722 H3BQ15 152 aa-0.22□□□□□ -2.44
PSPC1-205ENST00000497722 SNAPC5O75971 98 aa-0.22□□□□□ -2.44
PSPC1-205ENST00000497722 WHAMMP3Q1A5X7 153 aa-0.22□□□□□ -2.44
PSPC1-205ENST00000497722 KLK9Q2XQG4 91 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 195.3 ms