RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 NOTCH2Q04721 2471 aa13.3□□□□□ -0.28
TSC22D4-205ENST00000493217 FOXI1Q12951 378 aa13.3□□□□□ -0.28
TSC22D4-205ENST00000493217 TRBV30A0A0K0K1B3 111 aa13.3□□□□□ -0.28
TSC22D4-205ENST00000493217 Q1RN00 199 aa13.3□□□□□ -0.28
TSC22D4-205ENST00000493217 CIRBPQ14011 172 aaKnown RBP13.29□□□□□ -0.28
TSC22D4-205ENST00000493217 DAND5Q8N907 189 aa13.29□□□□□ -0.28
TSC22D4-205ENST00000493217 KIR2DL5BQ8NHK3 375 aa13.29□□□□□ -0.28
TSC22D4-205ENST00000493217 CRLF1O75462 422 aa13.28□□□□□ -0.28
TSC22D4-205ENST00000493217 VWFP04275 2813 aa13.28□□□□□ -0.28
TSC22D4-205ENST00000493217 TRBV6-8A0A0A6YYG3 113 aa13.28□□□□□ -0.28
TSC22D4-205ENST00000493217 LINC00612Q8N6U2 182 aa13.28□□□□□ -0.28
TSC22D4-205ENST00000493217 TRIAP1O43715 76 aa13.27□□□□□ -0.28
TSC22D4-205ENST00000493217 TEN1Q86WV5 123 aa13.27□□□□□ -0.28
TSC22D4-205ENST00000493217 ZNF625Q96I27 306 aaPredicted RBP13.27□□□□□ -0.28
TSC22D4-205ENST00000493217 GAGE12HA6NDE8 117 aa13.26□□□□□ -0.29
TSC22D4-205ENST00000493217 INAFM1C9JVW0 142 aa13.26□□□□□ -0.29
TSC22D4-205ENST00000493217 DEFB130BP0DP73 79 aa13.26□□□□□ -0.29
TSC22D4-205ENST00000493217 DEFB130AP0DP74 79 aa13.26□□□□□ -0.29
TSC22D4-205ENST00000493217 SPATA3Q8NHX4 192 aa13.26□□□□□ -0.29
TSC22D4-205ENST00000493217 SPATA25Q9BR10 227 aa13.26□□□□□ -0.29
TSC22D4-205ENST00000493217 GAGE6Q13070 117 aa13.25□□□□□ -0.29
TSC22D4-205ENST00000493217 X6R8D5 127 aa13.25□□□□□ -0.29
TSC22D4-205ENST00000493217 LINC00308Q8TCZ7 52 aa13.25□□□□□ -0.29
TSC22D4-205ENST00000493217 ICOSQ9Y6W8 199 aa13.25□□□□□ -0.29
TSC22D4-205ENST00000493217 IGLV4-60A0A075B6I1 120 aa13.24□□□□□ -0.29
TSC22D4-205ENST00000493217 NSD1Q96L73 2696 aaPredicted RBP13.24□□□□□ -0.29
TSC22D4-205ENST00000493217 C9JAW5 83 aa13.24□□□□□ -0.29
TSC22D4-205ENST00000493217 M0QXV9 152 aa13.24□□□□□ -0.29
TSC22D4-205ENST00000493217 SLC25A20O43772 301 aa13.24□□□□□ -0.29
TSC22D4-205ENST00000493217 ATXN8Q156A1 80 aa13.24□□□□□ -0.29
TSC22D4-205ENST00000493217 PRIMA1Q86XR5 153 aa13.24□□□□□ -0.29
TSC22D4-205ENST00000493217 CARD19Q96LW7 228 aa13.24□□□□□ -0.29
TSC22D4-205ENST00000493217 PPDPFLQ8WWR9 84 aa13.23□□□□□ -0.29
TSC22D4-205ENST00000493217 C9orf66Q5T8R8 295 aa13.22□□□□□ -0.29
TSC22D4-205ENST00000493217 SMIM9A6NGZ8 99 aa13.22□□□□□ -0.29
TSC22D4-205ENST00000493217 HERV-K104P63124 156 aa13.22□□□□□ -0.29
TSC22D4-205ENST00000493217 CHCHD5Q9BSY4 110 aa13.22□□□□□ -0.29
TSC22D4-205ENST00000493217 A0A0U1RRA0 63 aa13.21□□□□□ -0.29
TSC22D4-205ENST00000493217 ANKRD29Q8N6D5 301 aa13.21□□□□□ -0.29
TSC22D4-205ENST00000493217 LINC01620Q4KN68 170 aa13.2□□□□□ -0.3
TSC22D4-205ENST00000493217 SIGMAR1Q99720 223 aa13.2□□□□□ -0.3
TSC22D4-205ENST00000493217 NBEAL2Q6ZNJ1 2754 aa13.2□□□□□ -0.3
TSC22D4-205ENST00000493217 SOSTDC1Q6X4U4 206 aa13.2□□□□□ -0.3
TSC22D4-205ENST00000493217 COX6CP09669 75 aa13.19□□□□□ -0.3
TSC22D4-205ENST00000493217 RPL13AP40429 203 aaKnown RBP13.19□□□□□ -0.3
TSC22D4-205ENST00000493217 MEIG1Q5JSS6 88 aa13.19□□□□□ -0.3
TSC22D4-205ENST00000493217 IGHV3OR16-9A0A0B4J2B5 98 aa13.19□□□□□ -0.3
TSC22D4-205ENST00000493217 COPS9Q8WXC6 57 aa13.19□□□□□ -0.3
TSC22D4-205ENST00000493217 LINC01600Q96MT4 127 aa13.19□□□□□ -0.3
TSC22D4-205ENST00000493217 TENM1Q9UKZ4 2725 aa13.18□□□□□ -0.3
TSC22D4-205ENST00000493217 IGKV3OR2-268A0A0C4DH90 116 aa13.18□□□□□ -0.3
TSC22D4-205ENST00000493217 GYPEP15421 78 aa13.18□□□□□ -0.3
TSC22D4-205ENST00000493217 COX7B2Q8TF08 81 aa13.16□□□□□ -0.3
TSC22D4-205ENST00000493217 PRO0255Q9UI72 69 aa13.16□□□□□ -0.3
TSC22D4-205ENST00000493217 TRBV10-2A0A0K0K1G8 114 aa13.16□□□□□ -0.3
TSC22D4-205ENST00000493217 FAM222AQ5U5X8 452 aa13.16□□□□□ -0.3
TSC22D4-205ENST00000493217 PPDPFQ9H3Y8 114 aa13.16□□□□□ -0.3
TSC22D4-205ENST00000493217 LYRM9A8MSI8 78 aa13.14□□□□□ -0.31
TSC22D4-205ENST00000493217 CDIP1Q9H305 208 aa13.14□□□□□ -0.31
TSC22D4-205ENST00000493217 A0A087WZ39 114 aa13.14□□□□□ -0.31
TSC22D4-205ENST00000493217 CITED1Q99966 193 aa13.14□□□□□ -0.31
TSC22D4-205ENST00000493217 LST1O00453 97 aa13.13□□□□□ -0.31
TSC22D4-205ENST00000493217 CLEC2BQ92478 149 aa13.13□□□□□ -0.31
TSC22D4-205ENST00000493217 HIVEP1P15822 2718 aa13.13□□□□□ -0.31
TSC22D4-205ENST00000493217 LINC00959A0A1B0GUT2 108 aa13.12□□□□□ -0.31
TSC22D4-205ENST00000493217 A0A1B0GUV1 79 aa13.12□□□□□ -0.31
TSC22D4-205ENST00000493217 DEFB135Q30KP9 77 aa13.12□□□□□ -0.31
TSC22D4-205ENST00000493217 TOMM7Q9P0U1 55 aa13.12□□□□□ -0.31
TSC22D4-205ENST00000493217 APOC4P55056 127 aa13.11□□□□□ -0.31
TSC22D4-205ENST00000493217 SHISA2Q6UWI4 295 aa13.11□□□□□ -0.31
TSC22D4-205ENST00000493217 TRRAPQ9Y4A5 3859 aa13.1□□□□□ -0.31
TSC22D4-205ENST00000493217 NTN5Q8WTR8 489 aaPredicted RBP13.1□□□□□ -0.31
TSC22D4-205ENST00000493217 TMEM262E9PQX1 116 aa13.09□□□□□ -0.31
TSC22D4-205ENST00000493217 PAX4O43316 350 aa13.09□□□□□ -0.31
TSC22D4-205ENST00000493217 SCGB1A1P11684 91 aa13.09□□□□□ -0.31
TSC22D4-205ENST00000493217 C5orf38Q86SI9 138 aa13.09□□□□□ -0.31
TSC22D4-205ENST00000493217 DEFB4AO15263 64 aa13.09□□□□□ -0.31
TSC22D4-205ENST00000493217 ATRQ13535 2644 aa13.08□□□□□ -0.31
TSC22D4-205ENST00000493217 A0A096LPF7 62 aa13.08□□□□□ -0.32
TSC22D4-205ENST00000493217 MIR7-3HGQ8N6C7 128 aa13.08□□□□□ -0.32
TSC22D4-205ENST00000493217 IGHV4-28A0A0C4DH34 117 aa13.08□□□□□ -0.32
TSC22D4-205ENST00000493217 H3BT86 120 aa13.08□□□□□ -0.32
TSC22D4-205ENST00000493217 C2orf82Q6UX34 121 aa13.07□□□□□ -0.32
TSC22D4-205ENST00000493217 TEP1Q99973 2627 aaKnown RBP13.07□□□□□ -0.32
TSC22D4-205ENST00000493217 COX7A2LO14548 114 aa13.06□□□□□ -0.32
TSC22D4-205ENST00000493217 TEX49A0A1B0GTD5 131 aa13.06□□□□□ -0.32
TSC22D4-205ENST00000493217 WFDC9Q8NEX5 89 aa13.06□□□□□ -0.32
TSC22D4-205ENST00000493217 IBA57-AS1B1ANH7 110 aa13.04□□□□□ -0.32
TSC22D4-205ENST00000493217 XCL1P47992 114 aa13.04□□□□□ -0.32
TSC22D4-205ENST00000493217 SS18Q15532 418 aa13.04□□□□□ -0.32
TSC22D4-205ENST00000493217 Q8NAQ8 132 aa13.04□□□□□ -0.32
TSC22D4-205ENST00000493217 LINC00158P58513 81 aa13.03□□□□□ -0.32
TSC22D4-205ENST00000493217 DAD1P61803 113 aa13.03□□□□□ -0.32
TSC22D4-205ENST00000493217 WIPF1O43516 503 aa13.03□□□□□ -0.32
TSC22D4-205ENST00000493217 MIFP14174 115 aa13.03□□□□□ -0.32
TSC22D4-205ENST00000493217 XGP55808 180 aa13.03□□□□□ -0.32
TSC22D4-205ENST00000493217 IGKV2-28A0A075B6P5 120 aa13.02□□□□□ -0.33
TSC22D4-205ENST00000493217 TRAV13-2A0A0B4J235 113 aa13.02□□□□□ -0.33
TSC22D4-205ENST00000493217 IGKV2D-28P01615 120 aa13.02□□□□□ -0.33
TSC22D4-205ENST00000493217 UBE2WQ96B02 151 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms