RNA–Protein interactions for RNA: ENST00000486268.5

ERGIC3-215, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-215ENST00000486268 TRAV13-1A0A0B4J241 112 aa8.16□□□□□ -1.1
ERGIC3-215ENST00000486268 TMEM262E9PQX1 116 aa8.16□□□□□ -1.1
ERGIC3-215ENST00000486268 IGHV3-30-3P0DP02 117 aa8.16□□□□□ -1.1
ERGIC3-215ENST00000486268 SCGB1D4Q6XE38 83 aa8.16□□□□□ -1.1
ERGIC3-215ENST00000486268 TM2D2Q9BX73 214 aa8.16□□□□□ -1.1
ERGIC3-215ENST00000486268 CDKN2A-AS1Q9UH64 79 aa8.16□□□□□ -1.1
ERGIC3-215ENST00000486268 STAB2Q8WWQ8 2551 aa8.15□□□□□ -1.1
ERGIC3-215ENST00000486268 RBX1P62877 108 aa8.15□□□□□ -1.1
ERGIC3-215ENST00000486268 Q6ZTC4 211 aa8.15□□□□□ -1.1
ERGIC3-215ENST00000486268 SPANXB1Q9NS25 103 aaPredicted RBP8.15□□□□□ -1.1
ERGIC3-215ENST00000486268 IGLV4-60A0A075B6I1 120 aa8.14□□□□□ -1.11
ERGIC3-215ENST00000486268 IGLV5-39A0A0G2JS06 123 aa8.14□□□□□ -1.11
ERGIC3-215ENST00000486268 TSPEAR-AS2P59090 65 aa8.14□□□□□ -1.11
ERGIC3-215ENST00000486268 CEND1Q8N111 149 aa8.14□□□□□ -1.11
ERGIC3-215ENST00000486268 HIST1H4GQ99525 98 aa8.14□□□□□ -1.11
ERGIC3-215ENST00000486268 COX11Q9Y6N1 276 aa8.14□□□□□ -1.11
ERGIC3-215ENST00000486268 SPINK8P0C7L1 97 aa8.13□□□□□ -1.11
ERGIC3-215ENST00000486268 COX6A2Q02221 97 aa8.13□□□□□ -1.11
ERGIC3-215ENST00000486268 SS18Q15532 418 aa8.13□□□□□ -1.11
ERGIC3-215ENST00000486268 ZFAND6Q6FIF0 208 aa8.13□□□□□ -1.11
ERGIC3-215ENST00000486268 LINC01561Q8N1V8 128 aa8.13□□□□□ -1.11
ERGIC3-215ENST00000486268 DEFB131BA0A096LNP1 70 aa8.12□□□□□ -1.11
ERGIC3-215ENST00000486268 TRAV10A0A0B4J240 114 aa8.12□□□□□ -1.11
ERGIC3-215ENST00000486268 LINC00959A0A1B0GUT2 108 aa8.12□□□□□ -1.11
ERGIC3-215ENST00000486268 LYPD5Q6UWN5 251 aa8.12□□□□□ -1.11
ERGIC3-215ENST00000486268 STARD9Q9P2P6 4700 aa8.12□□□□□ -1.11
ERGIC3-215ENST00000486268 CSMD3Q7Z407 3707 aa8.11□□□□□ -1.11
ERGIC3-215ENST00000486268 TRAV8-3A0A0A6YYJ7 113 aa8.11□□□□□ -1.11
ERGIC3-215ENST00000486268 TMEM238LA0A1B0GVL6 79 aa8.11□□□□□ -1.11
ERGIC3-215ENST00000486268 A6NJY4 79 aa8.11□□□□□ -1.11
ERGIC3-215ENST00000486268 SMIM1B2RUZ4 78 aa8.11□□□□□ -1.11
ERGIC3-215ENST00000486268 TMEM238C9JI98 176 aa8.11□□□□□ -1.11
ERGIC3-215ENST00000486268 GCSHP23434 173 aa8.11□□□□□ -1.11
ERGIC3-215ENST00000486268 NANOS2P60321 138 aaKnown RBP8.11□□□□□ -1.11
ERGIC3-215ENST00000486268 SRSF9Q13242 221 aaKnown RBP eCLIP8.11□□□□□ -1.11
ERGIC3-215ENST00000486268 C15orf53Q8NAA6 179 aa8.11□□□□□ -1.11
ERGIC3-215ENST00000486268 NDUFA12Q9UI09 145 aa8.11□□□□□ -1.11
ERGIC3-215ENST00000486268 IGHV3-64A0A075B6Q5 118 aa8.1□□□□□ -1.11
ERGIC3-215ENST00000486268 A0A087WZ39 114 aa8.1□□□□□ -1.11
ERGIC3-215ENST00000486268 IGHV3OR16-9A0A0B4J2B5 98 aa8.1□□□□□ -1.11
ERGIC3-215ENST00000486268 NDUFA1O15239 70 aa8.1□□□□□ -1.11
ERGIC3-215ENST00000486268 TIMM17BO60830 172 aa8.1□□□□□ -1.11
ERGIC3-215ENST00000486268 PTTG1IPP53801 180 aa8.1□□□□□ -1.11
ERGIC3-215ENST00000486268 PLECQ15149 4684 aaKnown RBP8.1□□□□□ -1.11
ERGIC3-215ENST00000486268 SFTA2Q6UW10 78 aa8.1□□□□□ -1.11
ERGIC3-215ENST00000486268 Q6ZVH6 145 aa8.1□□□□□ -1.11
ERGIC3-215ENST00000486268 A0A0J9YXY3 114 aa8.09□□□□□ -1.11
ERGIC3-215ENST00000486268 TAX1BP3O14907 124 aa8.09□□□□□ -1.11
ERGIC3-215ENST00000486268 SMIM13P0DJ93 91 aa8.09□□□□□ -1.11
ERGIC3-215ENST00000486268 HERV-K104P63124 156 aa8.09□□□□□ -1.11
ERGIC3-215ENST00000486268 UBE2V1Q13404 147 aa8.09□□□□□ -1.11
ERGIC3-215ENST00000486268 ANGP03950 147 aaKnown RBP8.08□□□□□ -1.12
ERGIC3-215ENST00000486268 FXYD2P54710 66 aa8.08□□□□□ -1.12
ERGIC3-215ENST00000486268 REG3AQ06141 175 aa8.08□□□□□ -1.12
ERGIC3-215ENST00000486268 CIRBPQ14011 172 aaKnown RBP8.08□□□□□ -1.12
ERGIC3-215ENST00000486268 C10orf126Q8N4M7 172 aa8.08□□□□□ -1.12
ERGIC3-215ENST00000486268 IGKV3OR2-268A0A0C4DH90 116 aa8.07□□□□□ -1.12
ERGIC3-215ENST00000486268 CD164L2Q6UWJ8 174 aa8.07□□□□□ -1.12
ERGIC3-215ENST00000486268 LINC00269Q8N2A0 174 aa8.07□□□□□ -1.12
ERGIC3-215ENST00000486268 COPS9Q8WXC6 57 aa8.07□□□□□ -1.12
ERGIC3-215ENST00000486268 SPANXDQ9BXN6 97 aa8.07□□□□□ -1.12
ERGIC3-215ENST00000486268 SPANXCQ9NY87 97 aa8.07□□□□□ -1.12
ERGIC3-215ENST00000486268 A0A1B0GWB2 263 aa8.06□□□□□ -1.12
ERGIC3-215ENST00000486268 IGHV3-30P01768 117 aa8.06□□□□□ -1.12
ERGIC3-215ENST00000486268 IGHV3-30-5P0DP03 117 aa8.06□□□□□ -1.12
ERGIC3-215ENST00000486268 RPL24P83731 157 aaKnown RBP8.06□□□□□ -1.12
ERGIC3-215ENST00000486268 COX7B2Q8TF08 81 aa8.06□□□□□ -1.12
ERGIC3-215ENST00000486268 PRR34Q9NV39 138 aa8.06□□□□□ -1.12
ERGIC3-215ENST00000486268 DNAH1Q9P2D7 4330 aa8.05□□□□□ -1.12
ERGIC3-215ENST00000486268 TRAV8-4A0A0B4J246 113 aa8.05□□□□□ -1.12
ERGIC3-215ENST00000486268 IFITM1P13164 125 aa8.05□□□□□ -1.12
ERGIC3-215ENST00000486268 VAMP3Q15836 100 aa8.05□□□□□ -1.12
ERGIC3-215ENST00000486268 ZNF625Q96I27 306 aaPredicted RBP8.05□□□□□ -1.12
ERGIC3-215ENST00000486268 WWC2-AS2Q96NR7 200 aa8.05□□□□□ -1.12
ERGIC3-215ENST00000486268 Q9H8V8 135 aa8.05□□□□□ -1.12
ERGIC3-215ENST00000486268 C9orf118A6NHY6 69 aa8.04□□□□□ -1.12
ERGIC3-215ENST00000486268 XCL1P47992 114 aa8.04□□□□□ -1.12
ERGIC3-215ENST00000486268 ESRGQ1W209 222 aa8.04□□□□□ -1.12
ERGIC3-215ENST00000486268 CHCHD10Q8WYQ3 142 aaPredicted RBP8.04□□□□□ -1.12
ERGIC3-215ENST00000486268 LITAFQ99732 161 aa8.04□□□□□ -1.12
ERGIC3-215ENST00000486268 PPDPFQ9H3Y8 114 aa8.04□□□□□ -1.12
ERGIC3-215ENST00000486268 NHP2Q9NX24 153 aaKnown RBP8.04□□□□□ -1.12
ERGIC3-215ENST00000486268 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.03□□□□□ -1.12
ERGIC3-215ENST00000486268 COX7A2LO14548 114 aa8.03□□□□□ -1.12
ERGIC3-215ENST00000486268 CRPP02741 224 aa8.03□□□□□ -1.12
ERGIC3-215ENST00000486268 MIAQ16674 131 aa8.03□□□□□ -1.12
ERGIC3-215ENST00000486268 LINC01556Q5JQF7 62 aa8.03□□□□□ -1.12
ERGIC3-215ENST00000486268 Q8IZM0 81 aa8.03□□□□□ -1.12
ERGIC3-215ENST00000486268 APOMO95445 188 aa8.02□□□□□ -1.13
ERGIC3-215ENST00000486268 CXCL5P42830 114 aa8.02□□□□□ -1.13
ERGIC3-215ENST00000486268 C5orf38Q86SI9 138 aa8.02□□□□□ -1.13
ERGIC3-215ENST00000486268 SACSQ9NZJ4 4579 aa8.02□□□□□ -1.13
ERGIC3-215ENST00000486268 ALMS1Q8TCU4 4167 aa8.02□□□□□ -1.13
ERGIC3-215ENST00000486268 PRSS2P07478 247 aa8.01□□□□□ -1.13
ERGIC3-215ENST00000486268 CLPSL2Q6UWE3 100 aa8.01□□□□□ -1.13
ERGIC3-215ENST00000486268 LYSTQ99698 3801 aa8.01□□□□□ -1.13
ERGIC3-215ENST00000486268 KLK12Q9UKR0 248 aa8.01□□□□□ -1.13
ERGIC3-215ENST00000486268 K7EP13 123 aa8□□□□□ -1.13
ERGIC3-215ENST00000486268 MALP21145 153 aa8□□□□□ -1.13
ERGIC3-215ENST00000486268 CCL18P55774 89 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms