RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 TRBV6-8A0A0A6YYG3 113 aa5.21□□□□□ -1.58
SHROOM3-206ENST00000484236 LOC107984156A0A0G2JMH3 177 aa5.21□□□□□ -1.58
SHROOM3-206ENST00000484236 APOC4P55056 127 aa5.21□□□□□ -1.58
SHROOM3-206ENST00000484236 HERV-K104P63124 156 aa5.21□□□□□ -1.58
SHROOM3-206ENST00000484236 COX6A2Q02221 97 aa5.21□□□□□ -1.58
SHROOM3-206ENST00000484236 RNF151Q2KHN1 245 aa5.21□□□□□ -1.58
SHROOM3-206ENST00000484236 ARL17AQ8IVW1 177 aa5.21□□□□□ -1.58
SHROOM3-206ENST00000484236 CITED1Q99966 193 aa5.21□□□□□ -1.58
SHROOM3-206ENST00000484236 VPS25Q9BRG1 176 aa5.21□□□□□ -1.58
SHROOM3-206ENST00000484236 X6R8D5 127 aa5.21□□□□□ -1.58
SHROOM3-206ENST00000484236 TRBV30A0A0K0K1B3 111 aa5.2□□□□□ -1.58
SHROOM3-206ENST00000484236 SMIM1B2RUZ4 78 aa5.2□□□□□ -1.58
SHROOM3-206ENST00000484236 F5H768 121 aa5.2□□□□□ -1.58
SHROOM3-206ENST00000484236 M0QXV9 152 aa5.2□□□□□ -1.58
SHROOM3-206ENST00000484236 PSMB2P49721 201 aa5.2□□□□□ -1.58
SHROOM3-206ENST00000484236 WFDC2Q14508 124 aa5.2□□□□□ -1.58
SHROOM3-206ENST00000484236 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.2□□□□□ -1.58
SHROOM3-206ENST00000484236 WFDC9Q8NEX5 89 aa5.2□□□□□ -1.58
SHROOM3-206ENST00000484236 SETXQ7Z333 2677 aaKnown RBP5.2□□□□□ -1.58
SHROOM3-206ENST00000484236 SETD2Q9BYW2 2564 aaPredicted RBP5.19□□□□□ -1.58
SHROOM3-206ENST00000484236 NBPF19A0A087WUL8 3843 aa5.19□□□□□ -1.58
SHROOM3-206ENST00000484236 TRAV13-1A0A0B4J241 112 aa5.19□□□□□ -1.58
SHROOM3-206ENST00000484236 PRSS2P07478 247 aa5.19□□□□□ -1.58
SHROOM3-206ENST00000484236 SCGB1C2P0DMR2 95 aa5.19□□□□□ -1.58
SHROOM3-206ENST00000484236 ADAMTSL4-AS1Q5T5F5 129 aa5.19□□□□□ -1.58
SHROOM3-206ENST00000484236 SFTA2Q6UW10 78 aa5.19□□□□□ -1.58
SHROOM3-206ENST00000484236 KRTAP17-1Q9BYP8 105 aa5.19□□□□□ -1.58
SHROOM3-206ENST00000484236 PRO0255Q9UI72 69 aa5.19□□□□□ -1.58
SHROOM3-206ENST00000484236 JMJD1CQ15652 2540 aa5.18□□□□□ -1.58
SHROOM3-206ENST00000484236 LOC100131303A0A0U1RQF7 123 aa5.18□□□□□ -1.58
SHROOM3-206ENST00000484236 A0A1B0GUV1 79 aa5.18□□□□□ -1.58
SHROOM3-206ENST00000484236 TEX48A0A1B0GUV7 120 aa5.18□□□□□ -1.58
SHROOM3-206ENST00000484236 TCL1BO95988 128 aa5.18□□□□□ -1.58
SHROOM3-206ENST00000484236 COX6CP09669 75 aa5.18□□□□□ -1.58
SHROOM3-206ENST00000484236 GAGE6Q13070 117 aa5.18□□□□□ -1.58
SHROOM3-206ENST00000484236 ZNF625Q96I27 306 aaPredicted RBP5.18□□□□□ -1.58
SHROOM3-206ENST00000484236 LINC01600Q96MT4 127 aa5.18□□□□□ -1.58
SHROOM3-206ENST00000484236 CHCHD5Q9BSY4 110 aa5.18□□□□□ -1.58
SHROOM3-206ENST00000484236 Q9H8V8 135 aa5.18□□□□□ -1.58
SHROOM3-206ENST00000484236 NOTCH3Q9UM47 2321 aa5.18□□□□□ -1.58
SHROOM3-206ENST00000484236 A8MZ25 164 aa5.17□□□□□ -1.58
SHROOM3-206ENST00000484236 EIF4EBP3O60516 100 aaPredicted RBP5.17□□□□□ -1.58
SHROOM3-206ENST00000484236 DEFB130BP0DP73 79 aa5.17□□□□□ -1.58
SHROOM3-206ENST00000484236 DEFB130AP0DP74 79 aa5.17□□□□□ -1.58
SHROOM3-206ENST00000484236 MIFP14174 115 aa5.17□□□□□ -1.58
SHROOM3-206ENST00000484236 GYPEP15421 78 aa5.17□□□□□ -1.58
SHROOM3-206ENST00000484236 ATXN8Q156A1 80 aa5.17□□□□□ -1.58
SHROOM3-206ENST00000484236 Q1RN00 199 aa5.17□□□□□ -1.58
SHROOM3-206ENST00000484236 ETDBQ3ZM63 59 aa5.17□□□□□ -1.58
SHROOM3-206ENST00000484236 PRIMA1Q86XR5 153 aa5.17□□□□□ -1.58
SHROOM3-206ENST00000484236 LINC01561Q8N1V8 128 aa5.17□□□□□ -1.58
SHROOM3-206ENST00000484236 C2CD3Q4AC94 2353 aa5.17□□□□□ -1.58
SHROOM3-206ENST00000484236 GCN1Q92616 2671 aaKnown RBP5.16□□□□□ -1.58
SHROOM3-206ENST00000484236 TRAV26-1A0A087WT03 109 aa5.16□□□□□ -1.58
SHROOM3-206ENST00000484236 IGHV3OR16-9A0A0B4J2B5 98 aa5.16□□□□□ -1.58
SHROOM3-206ENST00000484236 FAM222AQ5U5X8 452 aa5.16□□□□□ -1.58
SHROOM3-206ENST00000484236 LINC00308Q8TCZ7 52 aa5.16□□□□□ -1.58
SHROOM3-206ENST00000484236 COX7B2Q8TF08 81 aa5.16□□□□□ -1.58
SHROOM3-206ENST00000484236 NSD1Q96L73 2696 aaPredicted RBP5.15□□□□□ -1.58
SHROOM3-206ENST00000484236 IGLV4-60A0A075B6I1 120 aa5.15□□□□□ -1.59
SHROOM3-206ENST00000484236 A0A087WZ39 114 aa5.15□□□□□ -1.59
SHROOM3-206ENST00000484236 FOXI1Q12951 378 aa5.15□□□□□ -1.59
SHROOM3-206ENST00000484236 MEIG1Q5JSS6 88 aa5.15□□□□□ -1.59
SHROOM3-206ENST00000484236 SH2D6Q7Z4S9 175 aa5.15□□□□□ -1.59
SHROOM3-206ENST00000484236 TEN1Q86WV5 123 aa5.15□□□□□ -1.59
SHROOM3-206ENST00000484236 PPDPFLQ8WWR9 84 aa5.15□□□□□ -1.59
SHROOM3-206ENST00000484236 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.59
SHROOM3-206ENST00000484236 ICOSQ9Y6W8 199 aa5.15□□□□□ -1.59
SHROOM3-206ENST00000484236 IGHV4-28A0A0C4DH34 117 aa5.14□□□□□ -1.59
SHROOM3-206ENST00000484236 LINC00959A0A1B0GUT2 108 aa5.14□□□□□ -1.59
SHROOM3-206ENST00000484236 H7C2G1 150 aa5.14□□□□□ -1.59
SHROOM3-206ENST00000484236 TRIAP1O43715 76 aa5.14□□□□□ -1.59
SHROOM3-206ENST00000484236 SLC25A20O43772 301 aa5.14□□□□□ -1.59
SHROOM3-206ENST00000484236 ATP5G1P05496 136 aa5.14□□□□□ -1.59
SHROOM3-206ENST00000484236 SPART-AS1P0CW21 52 aa5.14□□□□□ -1.59
SHROOM3-206ENST00000484236 PCP4P48539 62 aa5.14□□□□□ -1.59
SHROOM3-206ENST00000484236 DAD1P61803 113 aa5.14□□□□□ -1.59
SHROOM3-206ENST00000484236 SS18Q15532 418 aa5.14□□□□□ -1.59
SHROOM3-206ENST00000484236 DEFB135Q30KP9 77 aa5.14□□□□□ -1.59
SHROOM3-206ENST00000484236 HECTD1Q9ULT8 2610 aa5.14□□□□□ -1.59
SHROOM3-206ENST00000484236 FN1P02751 2386 aaKnown RBP5.14□□□□□ -1.59
SHROOM3-206ENST00000484236 NOTCH2Q04721 2471 aa5.13□□□□□ -1.59
SHROOM3-206ENST00000484236 TRBV10-2A0A0K0K1G8 114 aa5.13□□□□□ -1.59
SHROOM3-206ENST00000484236 IBA57-AS1B1ANH7 110 aa5.13□□□□□ -1.59
SHROOM3-206ENST00000484236 C9JAW5 83 aa5.13□□□□□ -1.59
SHROOM3-206ENST00000484236 TMEM262E9PQX1 116 aa5.13□□□□□ -1.59
SHROOM3-206ENST00000484236 RPL13AP40429 203 aaKnown RBP5.13□□□□□ -1.59
SHROOM3-206ENST00000484236 LINC01620Q4KN68 170 aa5.13□□□□□ -1.59
SHROOM3-206ENST00000484236 Q8NAQ8 132 aa5.13□□□□□ -1.59
SHROOM3-206ENST00000484236 SPATA3Q8NHX4 192 aa5.13□□□□□ -1.59
SHROOM3-206ENST00000484236 SPATA25Q9BR10 227 aa5.13□□□□□ -1.59
SHROOM3-206ENST00000484236 GAGE12HA6NDE8 117 aa5.12□□□□□ -1.59
SHROOM3-206ENST00000484236 H3BT86 120 aa5.12□□□□□ -1.59
SHROOM3-206ENST00000484236 MRPL23Q16540 153 aaKnown RBP5.12□□□□□ -1.59
SHROOM3-206ENST00000484236 MTURNQ8N3F0 131 aa5.12□□□□□ -1.59
SHROOM3-206ENST00000484236 ANKRD29Q8N6D5 301 aa5.12□□□□□ -1.59
SHROOM3-206ENST00000484236 KRTAP4-5Q9BYR2 181 aa5.12□□□□□ -1.59
SHROOM3-206ENST00000484236 OTOGQ6ZRI0 2925 aa5.11□□□□□ -1.59
SHROOM3-206ENST00000484236 TRAV13-2A0A0B4J235 113 aa5.11□□□□□ -1.59
SHROOM3-206ENST00000484236 LST1O00453 97 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms