RNA–Protein interactions for RNA: ENST00000476074.5

PCDH15-222, Transcript of protocadherin related 15, human

TSL 3

Gene PCDH15, Length 754 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-222	ENST00000476074		Q9HAA7	133 aa		3.75	□□□□□ -1.81
PCDH15-222	ENST00000476074	KLK5	Q9Y337	293 aa	Predicted RBP	3.75	□□□□□ -1.81
PCDH15-222	ENST00000476074	FRY	Q5TBA9	3013 aa		3.75	□□□□□ -1.81
PCDH15-222	ENST00000476074	ASPM	Q8IZT6	3477 aa		3.75	□□□□□ -1.81
PCDH15-222	ENST00000476074	ARFGEF3	Q5TH69	2177 aa		3.75	□□□□□ -1.81
PCDH15-222	ENST00000476074	CAD	P27708	2225 aa		3.74	□□□□□ -1.81
PCDH15-222	ENST00000476074	TRAV13-2	A0A0B4J235	113 aa		3.74	□□□□□ -1.81
PCDH15-222	ENST00000476074	TRAV12-3	A0A0B4J271	114 aa		3.74	□□□□□ -1.81
PCDH15-222	ENST00000476074	hADV29S1	A0JD25	119 aa		3.74	□□□□□ -1.81
PCDH15-222	ENST00000476074		A8MTW9	85 aa		3.74	□□□□□ -1.81
PCDH15-222	ENST00000476074	DNAL4	O96015	105 aa		3.74	□□□□□ -1.81
PCDH15-222	ENST00000476074	IGHG2	P01859	326 aa		3.74	□□□□□ -1.81
PCDH15-222	ENST00000476074	SAA4	P35542	130 aa		3.74	□□□□□ -1.81
PCDH15-222	ENST00000476074	DEFB1	P60022	68 aa		3.74	□□□□□ -1.81
PCDH15-222	ENST00000476074	S100A7L2	Q5SY68	101 aa		3.74	□□□□□ -1.81
PCDH15-222	ENST00000476074	ZNF625	Q96I27	306 aa	Predicted RBP	3.74	□□□□□ -1.81
PCDH15-222	ENST00000476074	LINC00467	Q9BRT7	94 aa		3.74	□□□□□ -1.81
PCDH15-222	ENST00000476074	CELSR3	Q9NYQ7	3312 aa		3.74	□□□□□ -1.81
PCDH15-222	ENST00000476074	ATRX	P46100	2492 aa		3.73	□□□□□ -1.81
PCDH15-222	ENST00000476074	PLCE1	Q9P212	2302 aa		3.73	□□□□□ -1.81
PCDH15-222	ENST00000476074	PIEZO2	Q9H5I5	2752 aa		3.73	□□□□□ -1.81
PCDH15-222	ENST00000476074	TRBV10-3	A0A0K0K1G6	114 aa		3.73	□□□□□ -1.81
PCDH15-222	ENST00000476074		F8WDY8	70 aa		3.73	□□□□□ -1.81
PCDH15-222	ENST00000476074		H0YGX0	51 aa		3.73	□□□□□ -1.81
PCDH15-222	ENST00000476074		K7EQG2	157 aa		3.73	□□□□□ -1.81
PCDH15-222	ENST00000476074	TRBV12-3	P01733	135 aa		3.73	□□□□□ -1.81
PCDH15-222	ENST00000476074	KRTAP10-6	P60371	365 aa	Predicted RBP	3.73	□□□□□ -1.81
PCDH15-222	ENST00000476074		Q5XG85	94 aa		3.73	□□□□□ -1.81
PCDH15-222	ENST00000476074	SOSTDC1	Q6X4U4	206 aa		3.73	□□□□□ -1.81
PCDH15-222	ENST00000476074		Q8N2B8	174 aa		3.73	□□□□□ -1.81
PCDH15-222	ENST00000476074	OCR1	Q9BZK8	76 aa		3.73	□□□□□ -1.81
PCDH15-222	ENST00000476074	CDKN2A-AS1	Q9UH64	79 aa		3.73	□□□□□ -1.81
PCDH15-222	ENST00000476074	DSP	P15924	2871 aa	Known RBP	3.73	□□□□□ -1.81
PCDH15-222	ENST00000476074	IGSF10	Q6WRI0	2623 aa		3.72	□□□□□ -1.81
PCDH15-222	ENST00000476074	OXT	P01178	125 aa		3.72	□□□□□ -1.81
PCDH15-222	ENST00000476074	IGHV3-53	P01767	116 aa		3.72	□□□□□ -1.81
PCDH15-222	ENST00000476074	SNRPD3	P62318	126 aa	Known RBP	3.72	□□□□□ -1.81
PCDH15-222	ENST00000476074	KIR2DL5B	Q8NHK3	375 aa		3.72	□□□□□ -1.81
PCDH15-222	ENST00000476074	PCNX1	Q96RV3	2341 aa		3.72	□□□□□ -1.81
PCDH15-222	ENST00000476074	MGA	Q8IWI9	3026 aa		3.72	□□□□□ -1.81
PCDH15-222	ENST00000476074	MUC4	Q99102	2169 aa		3.72	□□□□□ -1.81
PCDH15-222	ENST00000476074	CHD6	Q8TD26	2715 aa		3.72	□□□□□ -1.81
PCDH15-222	ENST00000476074	TRAV13-1	A0A0B4J241	112 aa		3.71	□□□□□ -1.82
PCDH15-222	ENST00000476074		A6NDX4	124 aa		3.71	□□□□□ -1.82
PCDH15-222	ENST00000476074		F5H768	121 aa		3.71	□□□□□ -1.82
PCDH15-222	ENST00000476074	CRP	P02741	224 aa		3.71	□□□□□ -1.82
PCDH15-222	ENST00000476074	PSMB8	P28062	276 aa		3.71	□□□□□ -1.82
PCDH15-222	ENST00000476074	SYNJ2BP	P57105	145 aa		3.71	□□□□□ -1.82
PCDH15-222	ENST00000476074	NPC2	P61916	151 aa		3.71	□□□□□ -1.82
PCDH15-222	ENST00000476074	LINC00242	Q5T6M2	205 aa		3.71	□□□□□ -1.82
PCDH15-222	ENST00000476074	LYPD5	Q6UWN5	251 aa		3.71	□□□□□ -1.82
PCDH15-222	ENST00000476074	LINC01561	Q8N1V8	128 aa		3.71	□□□□□ -1.82
PCDH15-222	ENST00000476074	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	3.71	□□□□□ -1.82
PCDH15-222	ENST00000476074	DEFB104A	Q8WTQ1	72 aa		3.71	□□□□□ -1.82
PCDH15-222	ENST00000476074	LINC00167	Q96N53	147 aa		3.71	□□□□□ -1.82
PCDH15-222	ENST00000476074	CYSTM1	Q9H1C7	97 aa		3.71	□□□□□ -1.82
PCDH15-222	ENST00000476074	LAMA5	O15230	3695 aa		3.71	□□□□□ -1.82
PCDH15-222	ENST00000476074	ZFYVE26	Q68DK2	2539 aa		3.71	□□□□□ -1.82
PCDH15-222	ENST00000476074	TLN1	Q9Y490	2541 aa	Known RBP	3.71	□□□□□ -1.82
PCDH15-222	ENST00000476074	RP1L1	Q8IWN7	2480 aa	Predicted RBP	3.7	□□□□□ -1.82
PCDH15-222	ENST00000476074	IGHV3OR16-12	A0A075B7B8	117 aa		3.7	□□□□□ -1.82
PCDH15-222	ENST00000476074	RS1	O15537	224 aa		3.7	□□□□□ -1.82
PCDH15-222	ENST00000476074	LY6H	O94772	140 aa		3.7	□□□□□ -1.82
PCDH15-222	ENST00000476074	LMO4	P61968	165 aa		3.7	□□□□□ -1.82
PCDH15-222	ENST00000476074	LINC01560	Q8TB33	94 aa		3.7	□□□□□ -1.82
PCDH15-222	ENST00000476074	LINC00846	Q9NV44	126 aa		3.7	□□□□□ -1.82
PCDH15-222	ENST00000476074	SERP1	Q9Y6X1	66 aa		3.7	□□□□□ -1.82
PCDH15-222	ENST00000476074	NBAS	A2RRP1	2371 aa		3.7	□□□□□ -1.82
PCDH15-222	ENST00000476074	HIVEP3	Q5T1R4	2406 aa		3.7	□□□□□ -1.82
PCDH15-222	ENST00000476074	ABCA1	O95477	2261 aa		3.69	□□□□□ -1.82
PCDH15-222	ENST00000476074	LOC400499	M0QZD8	3231 aa		3.69	□□□□□ -1.82
PCDH15-222	ENST00000476074	FREM2	Q5SZK8	3169 aa		3.69	□□□□□ -1.82
PCDH15-222	ENST00000476074	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	3.69	□□□□□ -1.82
PCDH15-222	ENST00000476074	TRAV12-2	A0A075B6T6	113 aa		3.69	□□□□□ -1.82
PCDH15-222	ENST00000476074	IGKV2-29	A2NJV5	120 aa	Predicted RBP	3.69	□□□□□ -1.82
PCDH15-222	ENST00000476074	LY6G6D	O95868	133 aa		3.69	□□□□□ -1.82
PCDH15-222	ENST00000476074	PRB1	P04280	392 aa		3.69	□□□□□ -1.82
PCDH15-222	ENST00000476074	CCK	P06307	115 aa		3.69	□□□□□ -1.82
PCDH15-222	ENST00000476074	DSCR8	Q96T75	97 aa		3.69	□□□□□ -1.82
PCDH15-222	ENST00000476074	KRTAP2-2	Q9BYT5	123 aa		3.69	□□□□□ -1.82
PCDH15-222	ENST00000476074	ZZEF1	O43149	2961 aa		3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	ITPR1	Q14643	2758 aa		3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	IGKV2-28	A0A075B6P5	120 aa		3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074		A0A0J9YWU9	116 aa		3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	TRBV10-1	A0A0K0K1A3	114 aa		3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	FAM236D	A0A1B0GTK5	79 aa		3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	IGKV2D-28	P01615	120 aa		3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	IGHV3-11	P01762	117 aa		3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	RBMY1A1	P0DJD3	496 aa	Known RBP	3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	RBMY1C	P0DJD4	496 aa		3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	FAM236C	P0DP71	79 aa		3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	COX6A2	Q02221	97 aa		3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	KLRB1	Q12918	225 aa		3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	RBMY1F	Q15415	496 aa	Known RBP	3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	SPINK13	Q1W4C9	94 aa		3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	RNASE13	Q5GAN3	156 aa	Known RBP	3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	LINC00337	Q8N6G1	96 aa		3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	C11orf72	Q8NBR9	251 aa		3.68	□□□□□ -1.82
PCDH15-222	ENST00000476074	C14orf132	Q9NPU4	83 aa		3.68	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms