RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 PRO0255Q9UI72 69 aa5.28□□□□□ -1.56
BEST1-202ENST00000449131 CSDC2Q9Y534 153 aaKnown RBP5.28□□□□□ -1.56
BEST1-202ENST00000449131 H3BT86 120 aa5.28□□□□□ -1.56
BEST1-202ENST00000449131 LECT2O14960 151 aa5.28□□□□□ -1.56
BEST1-202ENST00000449131 USP24Q9UPU5 2620 aa5.28□□□□□ -1.56
BEST1-202ENST00000449131 J3KT08 172 aa5.28□□□□□ -1.56
BEST1-202ENST00000449131 TSHBP01222 138 aa5.28□□□□□ -1.56
BEST1-202ENST00000449131 KLK12Q9UKR0 248 aa5.28□□□□□ -1.56
BEST1-202ENST00000449131 FLNCQ14315 2725 aa5.28□□□□□ -1.56
BEST1-202ENST00000449131 A0A0B4J2C4 111 aa5.28□□□□□ -1.56
BEST1-202ENST00000449131 CAMK2N2Q96S95 79 aa5.28□□□□□ -1.56
BEST1-202ENST00000449131 C9orf85Q96MD7 179 aa5.27□□□□□ -1.57
BEST1-202ENST00000449131 SPATA25Q9BR10 227 aa5.27□□□□□ -1.57
BEST1-202ENST00000449131 ACYP1P07311 99 aa5.27□□□□□ -1.57
BEST1-202ENST00000449131 ZNF580Q9UK33 172 aa5.27□□□□□ -1.57
BEST1-202ENST00000449131 NDUFC2O95298 119 aa5.26□□□□□ -1.57
BEST1-202ENST00000449131 IGKV3D-7A0A0C4DH55 119 aa5.26□□□□□ -1.57
BEST1-202ENST00000449131 SPAG11BQ08648 103 aa5.26□□□□□ -1.57
BEST1-202ENST00000449131 ZNF843Q8N446 348 aa5.26□□□□□ -1.57
BEST1-202ENST00000449131 COX8CQ7Z4L0 72 aa5.26□□□□□ -1.57
BEST1-202ENST00000449131 FAM222AQ5U5X8 452 aa5.26□□□□□ -1.57
BEST1-202ENST00000449131 TMEM126AQ9H061 195 aa5.26□□□□□ -1.57
BEST1-202ENST00000449131 WFDC10AQ9H1F0 79 aa5.26□□□□□ -1.57
BEST1-202ENST00000449131 F8P00451 2351 aa5.25□□□□□ -1.57
BEST1-202ENST00000449131 A0A0U1RQV1 116 aa5.25□□□□□ -1.57
BEST1-202ENST00000449131 NCR3O14931 201 aa5.25□□□□□ -1.57
BEST1-202ENST00000449131 PYGO1Q9Y3Y4 419 aa5.25□□□□□ -1.57
BEST1-202ENST00000449131 IGIPA6NJ69 53 aa5.25□□□□□ -1.57
BEST1-202ENST00000449131 TRIAP1O43715 76 aa5.25□□□□□ -1.57
BEST1-202ENST00000449131 CRIP2P52943 208 aaPredicted RBP5.25□□□□□ -1.57
BEST1-202ENST00000449131 XGP55808 180 aa5.25□□□□□ -1.57
BEST1-202ENST00000449131 PIK3CD-AS1Q5SR53 167 aa5.25□□□□□ -1.57
BEST1-202ENST00000449131 DEFB105AQ8NG35 78 aa5.25□□□□□ -1.57
BEST1-202ENST00000449131 KRTAP10-9P60411 292 aa5.25□□□□□ -1.57
BEST1-202ENST00000449131 LINC00308Q8TCZ7 52 aa5.25□□□□□ -1.57
BEST1-202ENST00000449131 LINC00269Q8N2A0 174 aa5.24□□□□□ -1.57
BEST1-202ENST00000449131 FAM236AA0A1B0GUQ0 79 aa5.24□□□□□ -1.57
BEST1-202ENST00000449131 FAM236BA0A1B0GV22 79 aa5.24□□□□□ -1.57
BEST1-202ENST00000449131 LINC00482Q8N8I6 264 aa5.24□□□□□ -1.57
BEST1-202ENST00000449131 LINC01006Q8NI28 216 aa5.24□□□□□ -1.57
BEST1-202ENST00000449131 SPANXCQ9NY87 97 aa5.24□□□□□ -1.57
BEST1-202ENST00000449131 SVEP1Q4LDE5 3571 aa5.24□□□□□ -1.57
BEST1-202ENST00000449131 RMI2Q96E14 147 aa5.24□□□□□ -1.57
BEST1-202ENST00000449131 COL27A1Q8IZC6 1860 aaPredicted RBP5.23□□□□□ -1.57
BEST1-202ENST00000449131 SPANXDQ9BXN6 97 aa5.23□□□□□ -1.57
BEST1-202ENST00000449131 CRYBG3Q68DQ2 2970 aa5.23□□□□□ -1.57
BEST1-202ENST00000449131 NDUFA1O15239 70 aa5.23□□□□□ -1.57
BEST1-202ENST00000449131 EIF4EBP3O60516 100 aaPredicted RBP5.23□□□□□ -1.57
BEST1-202ENST00000449131 CXCL5P42830 114 aa5.23□□□□□ -1.57
BEST1-202ENST00000449131 LOC100131303A0A0U1RQF7 123 aa5.23□□□□□ -1.57
BEST1-202ENST00000449131 TSPEAR-AS2P59090 65 aa5.23□□□□□ -1.57
BEST1-202ENST00000449131 RPL18AQ02543 176 aaKnown RBP5.23□□□□□ -1.57
BEST1-202ENST00000449131 UBE2D4Q9Y2X8 147 aa5.23□□□□□ -1.57
BEST1-202ENST00000449131 TRBV6-8A0A0A6YYG3 113 aa5.23□□□□□ -1.57
BEST1-202ENST00000449131 CDIP1Q9H305 208 aa5.23□□□□□ -1.57
BEST1-202ENST00000449131 FLNBO75369 2602 aaKnown RBP5.23□□□□□ -1.57
BEST1-202ENST00000449131 CHD6Q8TD26 2715 aa5.22□□□□□ -1.57
BEST1-202ENST00000449131 IGSF10Q6WRI0 2623 aa5.22□□□□□ -1.57
BEST1-202ENST00000449131 TRBV6-4A0A1B0GX49 114 aa5.22□□□□□ -1.57
BEST1-202ENST00000449131 NDUFA7O95182 113 aa5.22□□□□□ -1.57
BEST1-202ENST00000449131 C1orf195Q5TG92 126 aa5.22□□□□□ -1.57
BEST1-202ENST00000449131 BRK1Q8WUW1 75 aa5.22□□□□□ -1.57
BEST1-202ENST00000449131 C14orf132Q9NPU4 83 aa5.22□□□□□ -1.57
BEST1-202ENST00000449131 IGLV2-18A0A075B6J9 118 aa5.22□□□□□ -1.57
BEST1-202ENST00000449131 TRBV30A0A0K0K1B3 111 aa5.22□□□□□ -1.57
BEST1-202ENST00000449131 SMIM9A6NGZ8 99 aa5.22□□□□□ -1.57
BEST1-202ENST00000449131 REG3AQ06141 175 aa5.22□□□□□ -1.57
BEST1-202ENST00000449131 CFAP46Q8IYW2 2715 aa5.22□□□□□ -1.57
BEST1-202ENST00000449131 INAFM1C9JVW0 142 aa5.22□□□□□ -1.57
BEST1-202ENST00000449131 TRACP01848 142 aa5.22□□□□□ -1.57
BEST1-202ENST00000449131 ODF3L2Q3SX64 289 aa5.21□□□□□ -1.57
BEST1-202ENST00000449131 UTP20O75691 2785 aaKnown RBP5.21□□□□□ -1.57
BEST1-202ENST00000449131 CHCHD10Q8WYQ3 142 aaPredicted RBP5.21□□□□□ -1.58
BEST1-202ENST00000449131 A0A1B0GX51 115 aa5.21□□□□□ -1.58
BEST1-202ENST00000449131 POM121L12Q8N7R1 296 aa5.21□□□□□ -1.58
BEST1-202ENST00000449131 IGLV4-69A0A075B6H9 119 aa5.2□□□□□ -1.58
BEST1-202ENST00000449131 A0A0A0MQY5 61 aa5.2□□□□□ -1.58
BEST1-202ENST00000449131 ETDCA0A1B0GVM5 59 aa5.2□□□□□ -1.58
BEST1-202ENST00000449131 JMJD7-PLA2G4BH0Y9G9 81 aa5.2□□□□□ -1.58
BEST1-202ENST00000449131 CCDC179H3BU77 68 aa5.2□□□□□ -1.58
BEST1-202ENST00000449131 CCL18P55774 89 aa5.2□□□□□ -1.58
BEST1-202ENST00000449131 UBE2BP63146 152 aa5.2□□□□□ -1.58
BEST1-202ENST00000449131 RBMY1FQ15415 496 aaKnown RBP5.2□□□□□ -1.58
BEST1-202ENST00000449131 HIGD2BQ4VC39 106 aa5.2□□□□□ -1.58
BEST1-202ENST00000449131 BBC3Q96PG8 261 aaPredicted RBP5.2□□□□□ -1.58
BEST1-202ENST00000449131 HECTD1Q9ULT8 2610 aa5.2□□□□□ -1.58
BEST1-202ENST00000449131 SLPIP03973 132 aa5.2□□□□□ -1.58
BEST1-202ENST00000449131 MRPS36P82909 103 aaKnown RBP5.2□□□□□ -1.58
BEST1-202ENST00000449131 DCHS2Q6V1P9 2916 aa5.2□□□□□ -1.58
BEST1-202ENST00000449131 hADV29S1A0JD25 119 aa5.2□□□□□ -1.58
BEST1-202ENST00000449131 LYRM9A8MSI8 78 aa5.2□□□□□ -1.58
BEST1-202ENST00000449131 H7C423 109 aa5.2□□□□□ -1.58
BEST1-202ENST00000449131 UBE2D1P51668 147 aa5.2□□□□□ -1.58
BEST1-202ENST00000449131 NDUFV3P56181 108 aaKnown RBP5.2□□□□□ -1.58
BEST1-202ENST00000449131 IBA57-AS1B1ANH7 110 aa5.2□□□□□ -1.58
BEST1-202ENST00000449131 BRI3O95415 125 aa5.19□□□□□ -1.58
BEST1-202ENST00000449131 DIRC1Q969H9 104 aa5.19□□□□□ -1.58
BEST1-202ENST00000449131 CSMD1Q96PZ7 3565 aa5.19□□□□□ -1.58
BEST1-202ENST00000449131 IGHV4-28A0A0C4DH34 117 aa5.19□□□□□ -1.58
BEST1-202ENST00000449131 FAM229AH3BQW9 127 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms