RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	LOC100131303	A0A0U1RQF7	123 aa		11.98	□□□□□ -0.49
TOM1-210	ENST00000449058	LINC00308	Q8TCZ7	52 aa		11.98	□□□□□ -0.49
TOM1-210	ENST00000449058	TRBV10-2	A0A0K0K1G8	114 aa		11.98	□□□□□ -0.49
TOM1-210	ENST00000449058		H7C423	109 aa		11.98	□□□□□ -0.49
TOM1-210	ENST00000449058	JMJD1C	Q15652	2540 aa		11.97	□□□□□ -0.49
TOM1-210	ENST00000449058	COX6C	P09669	75 aa		11.97	□□□□□ -0.49
TOM1-210	ENST00000449058	RPL13A	P40429	203 aa	Known RBP	11.97	□□□□□ -0.49
TOM1-210	ENST00000449058	ANK3	Q12955	4377 aa	Known RBP	11.97	□□□□□ -0.49
TOM1-210	ENST00000449058	HELZ2	Q9BYK8	2649 aa	Known RBP	11.97	□□□□□ -0.49
TOM1-210	ENST00000449058	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.97	□□□□□ -0.49
TOM1-210	ENST00000449058	UBE2L6	O14933	153 aa		11.97	□□□□□ -0.49
TOM1-210	ENST00000449058	CKS1B	P61024	79 aa		11.96	□□□□□ -0.49
TOM1-210	ENST00000449058	ACAN	P16112	2415 aa		11.96	□□□□□ -0.49
TOM1-210	ENST00000449058	NOTCH3	Q9UM47	2321 aa		11.96	□□□□□ -0.5
TOM1-210	ENST00000449058	TRGV4	A0A0C4DH28	118 aa		11.95	□□□□□ -0.5
TOM1-210	ENST00000449058	FHL2	Q14192	279 aa		11.94	□□□□□ -0.5
TOM1-210	ENST00000449058	NTN5	Q8WTR8	489 aa	Predicted RBP	11.94	□□□□□ -0.5
TOM1-210	ENST00000449058	XG	P55808	180 aa		11.94	□□□□□ -0.5
TOM1-210	ENST00000449058	HERV-K104	P63124	156 aa		11.94	□□□□□ -0.5
TOM1-210	ENST00000449058	SOSTDC1	Q6X4U4	206 aa		11.94	□□□□□ -0.5
TOM1-210	ENST00000449058	PRIMA1	Q86XR5	153 aa		11.94	□□□□□ -0.5
TOM1-210	ENST00000449058	LST1	O00453	97 aa		11.93	□□□□□ -0.5
TOM1-210	ENST00000449058	COPS9	Q8WXC6	57 aa		11.93	□□□□□ -0.5
TOM1-210	ENST00000449058	TMEM262	E9PQX1	116 aa		11.93	□□□□□ -0.5
TOM1-210	ENST00000449058	CLEC2B	Q92478	149 aa		11.93	□□□□□ -0.5
TOM1-210	ENST00000449058	MT-ATP8	P03928	68 aa		11.92	□□□□□ -0.5
TOM1-210	ENST00000449058	SHISA2	Q6UWI4	295 aa		11.92	□□□□□ -0.5
TOM1-210	ENST00000449058	PPDPF	Q9H3Y8	114 aa		11.92	□□□□□ -0.5
TOM1-210	ENST00000449058	MTOR	P42345	2549 aa		11.92	□□□□□ -0.5
TOM1-210	ENST00000449058		A0A0U1RRA0	63 aa		11.91	□□□□□ -0.5
TOM1-210	ENST00000449058	ITPR2	Q14571	2701 aa		11.91	□□□□□ -0.5
TOM1-210	ENST00000449058	TRBV6-8	A0A0A6YYG3	113 aa		11.91	□□□□□ -0.5
TOM1-210	ENST00000449058		H3BT86	120 aa		11.91	□□□□□ -0.5
TOM1-210	ENST00000449058	MEIG1	Q5JSS6	88 aa		11.91	□□□□□ -0.5
TOM1-210	ENST00000449058	GAGE6	Q13070	117 aa		11.9	□□□□□ -0.5
TOM1-210	ENST00000449058	KRTAP10-3	P60369	221 aa		11.9	□□□□□ -0.51
TOM1-210	ENST00000449058	C2orf82	Q6UX34	121 aa		11.9	□□□□□ -0.51
TOM1-210	ENST00000449058	TEX49	A0A1B0GTD5	131 aa		11.89	□□□□□ -0.51
TOM1-210	ENST00000449058	C2CD3	Q4AC94	2353 aa		11.88	□□□□□ -0.51
TOM1-210	ENST00000449058	IGLV4-60	A0A075B6I1	120 aa		11.88	□□□□□ -0.51
TOM1-210	ENST00000449058	LINC00612	Q8N6U2	182 aa		11.88	□□□□□ -0.51
TOM1-210	ENST00000449058	KIR2DL5B	Q8NHK3	375 aa		11.88	□□□□□ -0.51
TOM1-210	ENST00000449058	UBE2W	Q96B02	151 aa		11.88	□□□□□ -0.51
TOM1-210	ENST00000449058	LINC00482	Q8N8I6	264 aa		11.87	□□□□□ -0.51
TOM1-210	ENST00000449058	COX7B2	Q8TF08	81 aa		11.87	□□□□□ -0.51
TOM1-210	ENST00000449058	IGHV3OR16-9	A0A0B4J2B5	98 aa		11.85	□□□□□ -0.51
TOM1-210	ENST00000449058	COX7A2L	O14548	114 aa		11.85	□□□□□ -0.51
TOM1-210	ENST00000449058	SMR3A	Q99954	134 aa		11.85	□□□□□ -0.51
TOM1-210	ENST00000449058	CHCHD5	Q9BSY4	110 aa		11.85	□□□□□ -0.51
TOM1-210	ENST00000449058	PF4	P02776	101 aa		11.85	□□□□□ -0.51
TOM1-210	ENST00000449058	CRLF1	O75462	422 aa		11.84	□□□□□ -0.51
TOM1-210	ENST00000449058	DEFB130B	P0DP73	79 aa		11.84	□□□□□ -0.51
TOM1-210	ENST00000449058	DEFB130A	P0DP74	79 aa		11.84	□□□□□ -0.51
TOM1-210	ENST00000449058	UNC79	Q9P2D8	2635 aa		11.84	□□□□□ -0.51
TOM1-210	ENST00000449058	GCN1	Q92616	2671 aa	Known RBP	11.83	□□□□□ -0.52
TOM1-210	ENST00000449058	IGKV3OR2-268	A0A0C4DH90	116 aa		11.83	□□□□□ -0.52
TOM1-210	ENST00000449058		A0A087WZ39	114 aa		11.82	□□□□□ -0.52
TOM1-210	ENST00000449058	DEFB121	Q5J5C9	76 aa		11.82	□□□□□ -0.52
TOM1-210	ENST00000449058		X6R8D5	127 aa		11.82	□□□□□ -0.52
TOM1-210	ENST00000449058	TRAV8-4	A0A0B4J246	113 aa		11.81	□□□□□ -0.52
TOM1-210	ENST00000449058	CITED1	Q99966	193 aa		11.81	□□□□□ -0.52
TOM1-210	ENST00000449058	TOMM7	Q9P0U1	55 aa		11.81	□□□□□ -0.52
TOM1-210	ENST00000449058	SMIM9	A6NGZ8	99 aa		11.8	□□□□□ -0.52
TOM1-210	ENST00000449058	MIR7-3HG	Q8N6C7	128 aa		11.8	□□□□□ -0.52
TOM1-210	ENST00000449058	LINC00959	A0A1B0GUT2	108 aa		11.79	□□□□□ -0.52
TOM1-210	ENST00000449058	GYPE	P15421	78 aa		11.79	□□□□□ -0.52
TOM1-210	ENST00000449058	FAM222A	Q5U5X8	452 aa		11.79	□□□□□ -0.52
TOM1-210	ENST00000449058	TRAV13-2	A0A0B4J235	113 aa		11.78	□□□□□ -0.52
TOM1-210	ENST00000449058	TRAC	P01848	142 aa		11.77	□□□□□ -0.52
TOM1-210	ENST00000449058	HIVEP2	P31629	2446 aa		11.77	□□□□□ -0.52
TOM1-210	ENST00000449058		A0A1B0GUV1	79 aa		11.77	□□□□□ -0.53
TOM1-210	ENST00000449058	IBA57-AS1	B1ANH7	110 aa		11.77	□□□□□ -0.53
TOM1-210	ENST00000449058	LY6G6D	O95868	133 aa		11.77	□□□□□ -0.53
TOM1-210	ENST00000449058	C5orf38	Q86SI9	138 aa		11.77	□□□□□ -0.53
TOM1-210	ENST00000449058	SS18L2	Q9UHA2	77 aa		11.77	□□□□□ -0.53
TOM1-210	ENST00000449058	PRO0255	Q9UI72	69 aa		11.77	□□□□□ -0.53
TOM1-210	ENST00000449058	IGKV2-28	A0A075B6P5	120 aa		11.76	□□□□□ -0.53
TOM1-210	ENST00000449058	IGKV2D-28	P01615	120 aa		11.76	□□□□□ -0.53
TOM1-210	ENST00000449058	SND1-IT1	Q9HBX3	110 aa		11.76	□□□□□ -0.53
TOM1-210	ENST00000449058	FAM240A	A0A1B0GVK7	77 aa		11.76	□□□□□ -0.53
TOM1-210	ENST00000449058	RPL28	P46779	137 aa	Known RBP	11.76	□□□□□ -0.53
TOM1-210	ENST00000449058	LINC00337	Q8N6G1	96 aa		11.76	□□□□□ -0.53
TOM1-210	ENST00000449058	CRP	P02741	224 aa		11.75	□□□□□ -0.53
TOM1-210	ENST00000449058	LINC00158	P58513	81 aa		11.75	□□□□□ -0.53
TOM1-210	ENST00000449058	SPATA3	Q8NHX4	192 aa		11.75	□□□□□ -0.53
TOM1-210	ENST00000449058	SNCG	O76070	127 aa		11.74	□□□□□ -0.53
TOM1-210	ENST00000449058	CCL18	P55774	89 aa		11.74	□□□□□ -0.53
TOM1-210	ENST00000449058	FAM218A	Q96MZ4	157 aa		11.74	□□□□□ -0.53
TOM1-210	ENST00000449058	C9orf66	Q5T8R8	295 aa		11.74	□□□□□ -0.53
TOM1-210	ENST00000449058	FASN	P49327	2511 aa	Known RBP	11.74	□□□□□ -0.53
TOM1-210	ENST00000449058	LYRM9	A8MSI8	78 aa		11.73	□□□□□ -0.53
TOM1-210	ENST00000449058	SS18	Q15532	418 aa		11.72	□□□□□ -0.53
TOM1-210	ENST00000449058	HECTD1	Q9ULT8	2610 aa		11.72	□□□□□ -0.53
TOM1-210	ENST00000449058	MRPL23	Q16540	153 aa	Known RBP	11.71	□□□□□ -0.53
TOM1-210	ENST00000449058	C15orf53	Q8NAA6	179 aa		11.71	□□□□□ -0.53
TOM1-210	ENST00000449058	FN1	P02751	2386 aa	Known RBP	11.71	□□□□□ -0.53
TOM1-210	ENST00000449058	PAX4	O43316	350 aa		11.71	□□□□□ -0.54
TOM1-210	ENST00000449058	XCL1	P47992	114 aa		11.71	□□□□□ -0.54
TOM1-210	ENST00000449058	LINC01561	Q8N1V8	128 aa		11.7	□□□□□ -0.54
TOM1-210	ENST00000449058	PFN2	P35080	140 aa		11.7	□□□□□ -0.54

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