RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 CRIP2P52943 208 aaPredicted RBP5.99□□□□□ -1.45
TMEM39A-202ENST00000438581 PROK1P58294 105 aa5.99□□□□□ -1.45
TMEM39A-202ENST00000438581 FAM222AQ5U5X8 452 aa5.99□□□□□ -1.45
TMEM39A-202ENST00000438581 H3BS24 57 aa5.99□□□□□ -1.45
TMEM39A-202ENST00000438581 ODF3Q96PU9 254 aa5.99□□□□□ -1.45
TMEM39A-202ENST00000438581 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.99□□□□□ -1.45
TMEM39A-202ENST00000438581 IL17DQ8TAD2 202 aa5.99□□□□□ -1.45
TMEM39A-202ENST00000438581 FLNCQ14315 2725 aa5.98□□□□□ -1.45
TMEM39A-202ENST00000438581 IGHV3-30P01768 117 aa5.98□□□□□ -1.45
TMEM39A-202ENST00000438581 IGHV3-33P01772 117 aa5.98□□□□□ -1.45
TMEM39A-202ENST00000438581 IGHV3-30-3P0DP02 117 aa5.98□□□□□ -1.45
TMEM39A-202ENST00000438581 IGHV3-30-5P0DP03 117 aa5.98□□□□□ -1.45
TMEM39A-202ENST00000438581 DAZ2Q13117 558 aaKnown RBP5.98□□□□□ -1.45
TMEM39A-202ENST00000438581 DAZ4Q86SG3 579 aaKnown RBP5.98□□□□□ -1.45
TMEM39A-202ENST00000438581 DAZ3Q9NR90 486 aaKnown RBP5.98□□□□□ -1.45
TMEM39A-202ENST00000438581 COL27A1Q8IZC6 1860 aaPredicted RBP5.98□□□□□ -1.45
TMEM39A-202ENST00000438581 PRB2P02812 416 aaPredicted RBP5.98□□□□□ -1.45
TMEM39A-202ENST00000438581 RNASE3P12724 160 aaKnown RBP5.98□□□□□ -1.45
TMEM39A-202ENST00000438581 IGKV2D-24A0A075B6R9 120 aa5.97□□□□□ -1.45
TMEM39A-202ENST00000438581 GAS8-AS1O95177 125 aa5.97□□□□□ -1.45
TMEM39A-202ENST00000438581 ODF3L2Q3SX64 289 aa5.97□□□□□ -1.45
TMEM39A-202ENST00000438581 MUC4Q99102 2169 aa5.97□□□□□ -1.45
TMEM39A-202ENST00000438581 KLLNB2CW77 178 aa5.97□□□□□ -1.45
TMEM39A-202ENST00000438581 LEPROTO15243 131 aa5.97□□□□□ -1.45
TMEM39A-202ENST00000438581 SLC25A20O43772 301 aa5.97□□□□□ -1.45
TMEM39A-202ENST00000438581 C20orf203Q8NBC4 194 aa5.97□□□□□ -1.45
TMEM39A-202ENST00000438581 PRO0255Q9UI72 69 aa5.97□□□□□ -1.45
TMEM39A-202ENST00000438581 ICOSQ9Y6W8 199 aa5.97□□□□□ -1.45
TMEM39A-202ENST00000438581 K7ERJ3 54 aa5.97□□□□□ -1.45
TMEM39A-202ENST00000438581 C2orf82Q6UX34 121 aa5.96□□□□□ -1.45
TMEM39A-202ENST00000438581 Q9H8V8 135 aa5.96□□□□□ -1.45
TMEM39A-202ENST00000438581 RNF185Q96GF1 192 aa5.96□□□□□ -1.46
TMEM39A-202ENST00000438581 X6R8D5 127 aa5.96□□□□□ -1.46
TMEM39A-202ENST00000438581 ATMQ13315 3056 aa5.96□□□□□ -1.46
TMEM39A-202ENST00000438581 C11orf86A6NJI1 115 aa5.96□□□□□ -1.46
TMEM39A-202ENST00000438581 TOMM6Q96B49 74 aa5.95□□□□□ -1.46
TMEM39A-202ENST00000438581 UBE2BP63146 152 aa5.95□□□□□ -1.46
TMEM39A-202ENST00000438581 NBEAQ8NFP9 2946 aa5.95□□□□□ -1.46
TMEM39A-202ENST00000438581 INAFM2P0DMQ5 153 aa5.95□□□□□ -1.46
TMEM39A-202ENST00000438581 KTN1-AS1Q86SY8 53 aa5.95□□□□□ -1.46
TMEM39A-202ENST00000438581 KLK12Q9UKR0 248 aa5.95□□□□□ -1.46
TMEM39A-202ENST00000438581 LINC00310P59036 64 aa5.95□□□□□ -1.46
TMEM39A-202ENST00000438581 TRBV10-1A0A0K0K1A3 114 aa5.94□□□□□ -1.46
TMEM39A-202ENST00000438581 DMXL1Q9Y485 3027 aa5.94□□□□□ -1.46
TMEM39A-202ENST00000438581 M0QY20 66 aa5.94□□□□□ -1.46
TMEM39A-202ENST00000438581 TIMM17AQ99595 171 aa5.94□□□□□ -1.46
TMEM39A-202ENST00000438581 A0A0B4J2C4 111 aa5.94□□□□□ -1.46
TMEM39A-202ENST00000438581 TRBV27A0A0K0K1C4 114 aa5.94□□□□□ -1.46
TMEM39A-202ENST00000438581 CXCL6P80162 114 aa5.94□□□□□ -1.46
TMEM39A-202ENST00000438581 SLC25A29Q8N8R3 303 aa5.94□□□□□ -1.46
TMEM39A-202ENST00000438581 TRAV8-3A0A0A6YYJ7 113 aa5.93□□□□□ -1.46
TMEM39A-202ENST00000438581 CCL18P55774 89 aa5.93□□□□□ -1.46
TMEM39A-202ENST00000438581 ATP5EP2Q5VTU8 51 aa5.93□□□□□ -1.46
TMEM39A-202ENST00000438581 ADGRG4Q8IZF6 3080 aa5.93□□□□□ -1.46
TMEM39A-202ENST00000438581 COX8CQ7Z4L0 72 aa5.93□□□□□ -1.46
TMEM39A-202ENST00000438581 DAND5Q8N907 189 aa5.93□□□□□ -1.46
TMEM39A-202ENST00000438581 NEXN-AS1Q8NBZ9 246 aa5.92□□□□□ -1.46
TMEM39A-202ENST00000438581 C11orf45Q8TAV5 145 aa5.92□□□□□ -1.46
TMEM39A-202ENST00000438581 TP73-AS1Q9UF72 201 aa5.92□□□□□ -1.46
TMEM39A-202ENST00000438581 IGLV1-51P01701 117 aa5.92□□□□□ -1.46
TMEM39A-202ENST00000438581 RBMY1FQ15415 496 aaKnown RBP5.92□□□□□ -1.46
TMEM39A-202ENST00000438581 LINC00467Q9BRT7 94 aa5.92□□□□□ -1.46
TMEM39A-202ENST00000438581 hADV29S1A0JD25 119 aa5.92□□□□□ -1.46
TMEM39A-202ENST00000438581 ZZEF1O43149 2961 aa5.92□□□□□ -1.46
TMEM39A-202ENST00000438581 COL12A1Q99715 3063 aa5.92□□□□□ -1.46
TMEM39A-202ENST00000438581 TRBV10-2A0A0K0K1G8 114 aa5.92□□□□□ -1.46
TMEM39A-202ENST00000438581 ZNF580Q9UK33 172 aa5.92□□□□□ -1.46
TMEM39A-202ENST00000438581 TRAV12-1A0A0B4J245 112 aa5.91□□□□□ -1.46
TMEM39A-202ENST00000438581 FXYD2P54710 66 aa5.91□□□□□ -1.46
TMEM39A-202ENST00000438581 SOCS3O14543 225 aa5.91□□□□□ -1.46
TMEM39A-202ENST00000438581 PRO1854Q9UHT4 67 aa5.91□□□□□ -1.46
TMEM39A-202ENST00000438581 SETXQ7Z333 2677 aaKnown RBP5.91□□□□□ -1.46
TMEM39A-202ENST00000438581 IGHV4-28A0A0C4DH34 117 aa5.91□□□□□ -1.46
TMEM39A-202ENST00000438581 LOC100131303A0A0U1RQF7 123 aa5.91□□□□□ -1.46
TMEM39A-202ENST00000438581 NRACQ8N912 160 aa5.91□□□□□ -1.46
TMEM39A-202ENST00000438581 NTN5Q8WTR8 489 aaPredicted RBP5.91□□□□□ -1.46
TMEM39A-202ENST00000438581 COX7A2LO14548 114 aa5.9□□□□□ -1.46
TMEM39A-202ENST00000438581 IGHV4-30-4P0DP06 118 aa5.9□□□□□ -1.46
TMEM39A-202ENST00000438581 EPM2AB3EWF7 344 aa5.9□□□□□ -1.47
TMEM39A-202ENST00000438581 TCL1BO95988 128 aa5.9□□□□□ -1.47
TMEM39A-202ENST00000438581 C16orf95Q9H693 158 aa5.9□□□□□ -1.47
TMEM39A-202ENST00000438581 TEX15Q9BXT5 2789 aa5.9□□□□□ -1.47
TMEM39A-202ENST00000438581 UNC79Q9P2D8 2635 aa5.89□□□□□ -1.47
TMEM39A-202ENST00000438581 DEFB131BA0A096LNP1 70 aa5.89□□□□□ -1.47
TMEM39A-202ENST00000438581 U3KQK5 164 aa5.89□□□□□ -1.47
TMEM39A-202ENST00000438581 MIFP14174 115 aa5.89□□□□□ -1.47
TMEM39A-202ENST00000438581 RMI2Q96E14 147 aa5.89□□□□□ -1.47
TMEM39A-202ENST00000438581 CARD19Q96LW7 228 aa5.89□□□□□ -1.47
TMEM39A-202ENST00000438581 UBE2D3P61077 147 aa5.89□□□□□ -1.47
TMEM39A-202ENST00000438581 UBE2D2P62837 147 aa5.89□□□□□ -1.47
TMEM39A-202ENST00000438581 LINC00269Q8N2A0 174 aa5.89□□□□□ -1.47
TMEM39A-202ENST00000438581 CAMK2N2Q96S95 79 aa5.89□□□□□ -1.47
TMEM39A-202ENST00000438581 MUSTN1Q8IVN3 82 aa5.88□□□□□ -1.47
TMEM39A-202ENST00000438581 CNFNQ9BYD5 112 aa5.88□□□□□ -1.47
TMEM39A-202ENST00000438581 CDKN2A-AS1Q9UH64 79 aa5.88□□□□□ -1.47
TMEM39A-202ENST00000438581 GCN1Q92616 2671 aaKnown RBP5.88□□□□□ -1.47
TMEM39A-202ENST00000438581 IGLV4-3A0A075B6K6 122 aa5.88□□□□□ -1.47
TMEM39A-202ENST00000438581 FAM19A4Q96LR4 140 aa5.88□□□□□ -1.47
TMEM39A-202ENST00000438581 IGHV4-4A0A075B6R2 117 aa5.88□□□□□ -1.47
TMEM39A-202ENST00000438581 NFE4Q86UQ8 179 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms