RNA–Protein interactions for RNA: ENST00000431979.1

LINC01087-201, Transcript of long intergenic non-protein coding RNA 1087, humanhuman

TSL 1 (best) BASIC

Gene LINC01087, Length 3,516 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01087-201ENST00000431979 H7C423 109 aa4.91□□□□□ -1.62
LINC01087-201ENST00000431979 C2orf48Q96LS8 159 aa4.91□□□□□ -1.62
LINC01087-201ENST00000431979 SMIM1B2RUZ4 78 aa4.91□□□□□ -1.62
LINC01087-201ENST00000431979 FAM74A4Q5TZK3 123 aa4.91□□□□□ -1.62
LINC01087-201ENST00000431979 IMUPQ9GZP8 106 aa4.91□□□□□ -1.62
LINC01087-201ENST00000431979 ANKRD17O75179 2603 aaKnown RBP4.91□□□□□ -1.62
LINC01087-201ENST00000431979 KRTAP10-3P60369 221 aa4.9□□□□□ -1.62
LINC01087-201ENST00000431979 IGKV3-20P01619 116 aa4.9□□□□□ -1.62
LINC01087-201ENST00000431979 DPH3Q96FX2 82 aa4.9□□□□□ -1.62
LINC01087-201ENST00000431979 CYSTM1Q9H1C7 97 aa4.9□□□□□ -1.62
LINC01087-201ENST00000431979 SORL1Q92673 2214 aa4.9□□□□□ -1.63
LINC01087-201ENST00000431979 HRCT1Q6UXD1 115 aa4.9□□□□□ -1.63
LINC01087-201ENST00000431979 CDC42SE2Q9NRR3 84 aa4.9□□□□□ -1.63
LINC01087-201ENST00000431979 TRAV8-3A0A0A6YYJ7 113 aa4.89□□□□□ -1.63
LINC01087-201ENST00000431979 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.89□□□□□ -1.63
LINC01087-201ENST00000431979 TRIAP1O43715 76 aa4.89□□□□□ -1.63
LINC01087-201ENST00000431979 LGALS3P17931 250 aaKnown RBP4.89□□□□□ -1.63
LINC01087-201ENST00000431979 TMEM170BQ5T4T1 132 aa4.89□□□□□ -1.63
LINC01087-201ENST00000431979 SOSTDC1Q6X4U4 206 aa4.89□□□□□ -1.63
LINC01087-201ENST00000431979 F5H697 171 aa4.89□□□□□ -1.63
LINC01087-201ENST00000431979 DAZ4Q86SG3 579 aaKnown RBP4.89□□□□□ -1.63
LINC01087-201ENST00000431979 DAZ3Q9NR90 486 aaKnown RBP4.89□□□□□ -1.63
LINC01087-201ENST00000431979 K7EQD1 137 aa4.89□□□□□ -1.63
LINC01087-201ENST00000431979 ATP5G1P05496 136 aa4.89□□□□□ -1.63
LINC01087-201ENST00000431979 NIPBLQ6KC79 2804 aaeCLIP4.88□□□□□ -1.63
LINC01087-201ENST00000431979 COX7CP15954 63 aa4.88□□□□□ -1.63
LINC01087-201ENST00000431979 SRSF9Q13242 221 aaKnown RBP eCLIP4.88□□□□□ -1.63
LINC01087-201ENST00000431979 WFDC11Q8NEX6 87 aa4.88□□□□□ -1.63
LINC01087-201ENST00000431979 LINC01006Q8NI28 216 aa4.88□□□□□ -1.63
LINC01087-201ENST00000431979 CDKN2A-AS1Q9UH64 79 aa4.88□□□□□ -1.63
LINC01087-201ENST00000431979 ITPR3Q14573 2671 aa4.88□□□□□ -1.63
LINC01087-201ENST00000431979 TRBV6-4A0A1B0GX49 114 aa4.88□□□□□ -1.63
LINC01087-201ENST00000431979 MALP21145 153 aa4.88□□□□□ -1.63
LINC01087-201ENST00000431979 DEFB104AQ8WTQ1 72 aa4.88□□□□□ -1.63
LINC01087-201ENST00000431979 UBE2WQ96B02 151 aa4.88□□□□□ -1.63
LINC01087-201ENST00000431979 MYO9AB2RTY4 2548 aa4.88□□□□□ -1.63
LINC01087-201ENST00000431979 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.88□□□□□ -1.63
LINC01087-201ENST00000431979 IGKV2-29A2NJV5 120 aaPredicted RBP4.88□□□□□ -1.63
LINC01087-201ENST00000431979 CCL24O00175 119 aa4.88□□□□□ -1.63
LINC01087-201ENST00000431979 HIST1H4AP62805 103 aaKnown RBP4.88□□□□□ -1.63
LINC01087-201ENST00000431979 LINC01620Q4KN68 170 aa4.88□□□□□ -1.63
LINC01087-201ENST00000431979 SCGB1D4Q6XE38 83 aa4.88□□□□□ -1.63
LINC01087-201ENST00000431979 PRO0628Q9UI54 55 aa4.88□□□□□ -1.63
LINC01087-201ENST00000431979 ABCA12Q86UK0 2595 aa4.87□□□□□ -1.63
LINC01087-201ENST00000431979 TRBV10-2A0A0K0K1G8 114 aa4.87□□□□□ -1.63
LINC01087-201ENST00000431979 A8MZ25 164 aa4.87□□□□□ -1.63
LINC01087-201ENST00000431979 LST1O00453 97 aa4.87□□□□□ -1.63
LINC01087-201ENST00000431979 SONP18583 2426 aaKnown RBP4.87□□□□□ -1.63
LINC01087-201ENST00000431979 GAGE2AQ6NT46 116 aa4.87□□□□□ -1.63
LINC01087-201ENST00000431979 NDUFA12Q9UI09 145 aa4.87□□□□□ -1.63
LINC01087-201ENST00000431979 CMC4P56277 68 aaPredicted RBP4.86□□□□□ -1.63
LINC01087-201ENST00000431979 TMEM258P61165 79 aa4.86□□□□□ -1.63
LINC01087-201ENST00000431979 FHL2Q14192 279 aa4.86□□□□□ -1.63
LINC01087-201ENST00000431979 Q6ZTI0 123 aa4.86□□□□□ -1.63
LINC01087-201ENST00000431979 C16orf74Q96GX8 76 aa4.86□□□□□ -1.63
LINC01087-201ENST00000431979 ICOSQ9Y6W8 199 aa4.86□□□□□ -1.63
LINC01087-201ENST00000431979 DYNC2H1Q8NCM8 4307 aaKnown RBP4.86□□□□□ -1.63
LINC01087-201ENST00000431979 CHD6Q8TD26 2715 aa4.86□□□□□ -1.63
LINC01087-201ENST00000431979 IGHV3-73A0A0B4J1V6 119 aa4.86□□□□□ -1.63
LINC01087-201ENST00000431979 HILS1P60008 231 aa4.86□□□□□ -1.63
LINC01087-201ENST00000431979 LINC01561Q8N1V8 128 aa4.86□□□□□ -1.63
LINC01087-201ENST00000431979 LINC00308Q8TCZ7 52 aa4.86□□□□□ -1.63
LINC01087-201ENST00000431979 SEC61GP60059 68 aa4.85□□□□□ -1.63
LINC01087-201ENST00000431979 HIST2H2BDQ6DRA6 164 aa4.85□□□□□ -1.63
LINC01087-201ENST00000431979 SMCR5Q8TEV8 140 aa4.85□□□□□ -1.63
LINC01087-201ENST00000431979 OBSCN-AS1Q96MR7 158 aa4.85□□□□□ -1.63
LINC01087-201ENST00000431979 LOC100131303A0A0U1RQF7 123 aa4.85□□□□□ -1.63
LINC01087-201ENST00000431979 PLA2G2AP14555 144 aa4.85□□□□□ -1.63
LINC01087-201ENST00000431979 ATXN8Q156A1 80 aa4.85□□□□□ -1.63
LINC01087-201ENST00000431979 C5orf38Q86SI9 138 aa4.85□□□□□ -1.63
LINC01087-201ENST00000431979 UPK3BQ9BT76 320 aa4.85□□□□□ -1.63
LINC01087-201ENST00000431979 H3BT86 120 aa4.85□□□□□ -1.63
LINC01087-201ENST00000431979 LY6G6DO95868 133 aa4.85□□□□□ -1.63
LINC01087-201ENST00000431979 IGHV3OR16-9A0A0B4J2B5 98 aa4.84□□□□□ -1.63
LINC01087-201ENST00000431979 X6R8D5 127 aa4.84□□□□□ -1.63
LINC01087-201ENST00000431979 WNK1Q9H4A3 2382 aa4.84□□□□□ -1.63
LINC01087-201ENST00000431979 hADV29S1A0JD25 119 aa4.84□□□□□ -1.63
LINC01087-201ENST00000431979 RNASE13Q5GAN3 156 aaKnown RBP4.84□□□□□ -1.63
LINC01087-201ENST00000431979 FAM222AQ5U5X8 452 aa4.84□□□□□ -1.63
LINC01087-201ENST00000431979 HIST2H2BCQ6DN03 193 aa4.84□□□□□ -1.63
LINC01087-201ENST00000431979 LINC00482Q8N8I6 264 aa4.84□□□□□ -1.63
LINC01087-201ENST00000431979 C2CD3Q4AC94 2353 aa4.84□□□□□ -1.63
LINC01087-201ENST00000431979 C2orf82Q6UX34 121 aa4.84□□□□□ -1.64
LINC01087-201ENST00000431979 DSCR8Q96T75 97 aa4.84□□□□□ -1.64
LINC01087-201ENST00000431979 IGKV2-28A0A075B6P5 120 aa4.83□□□□□ -1.64
LINC01087-201ENST00000431979 IGKV2D-28P01615 120 aa4.83□□□□□ -1.64
LINC01087-201ENST00000431979 LINC00336Q6ZUF6 198 aa4.83□□□□□ -1.64
LINC01087-201ENST00000431979 OTOGQ6ZRI0 2925 aa4.83□□□□□ -1.64
LINC01087-201ENST00000431979 EPM2AB3EWF7 344 aa4.83□□□□□ -1.64
LINC01087-201ENST00000431979 CXCL5P42830 114 aa4.83□□□□□ -1.64
LINC01087-201ENST00000431979 LINC00167Q96N53 147 aa4.83□□□□□ -1.64
LINC01087-201ENST00000431979 IGHV3-38A0A0C4DH36 116 aa4.83□□□□□ -1.64
LINC01087-201ENST00000431979 DYNLRB2Q8TF09 96 aa4.83□□□□□ -1.64
LINC01087-201ENST00000431979 XCL2Q9UBD3 114 aa4.83□□□□□ -1.64
LINC01087-201ENST00000431979 HELZ2Q9BYK8 2649 aaKnown RBP4.82□□□□□ -1.64
LINC01087-201ENST00000431979 IGHV3-64A0A075B6Q5 118 aa4.82□□□□□ -1.64
LINC01087-201ENST00000431979 TRACP01848 142 aa4.82□□□□□ -1.64
LINC01087-201ENST00000431979 RPL35AP18077 110 aaKnown RBP4.82□□□□□ -1.64
LINC01087-201ENST00000431979 TRRAPQ9Y4A5 3859 aa4.82□□□□□ -1.64
LINC01087-201ENST00000431979 A0A087WZ39 114 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 438 ms