RNA–Protein interactions for RNA: ENST00000419308.6

FOXA2-202, Transcript of forkhead box A2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FOXA2, Length 2,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-202ENST00000419308 HIVEP2P31629 2446 aa18.77■□□□□ 0.6
FOXA2-202ENST00000419308 FASNP49327 2511 aaKnown RBP18.77■□□□□ 0.6
FOXA2-202ENST00000419308 CIRBPQ14011 172 aaKnown RBP18.77■□□□□ 0.6
FOXA2-202ENST00000419308 KRTAP10-3P60369 221 aa18.76■□□□□ 0.59
FOXA2-202ENST00000419308 ATXN8Q156A1 80 aa18.76■□□□□ 0.59
FOXA2-202ENST00000419308 F5H768 121 aa18.76■□□□□ 0.59
FOXA2-202ENST00000419308 ICOSQ9Y6W8 199 aa18.76■□□□□ 0.59
FOXA2-202ENST00000419308 ZNF625Q96I27 306 aaPredicted RBP18.75■□□□□ 0.59
FOXA2-202ENST00000419308 M0QXV9 152 aa18.74■□□□□ 0.59
FOXA2-202ENST00000419308 FHL2Q14192 279 aa18.74■□□□□ 0.59
FOXA2-202ENST00000419308 LINC01620Q4KN68 170 aa18.73■□□□□ 0.59
FOXA2-202ENST00000419308 H7C423 109 aa18.72■□□□□ 0.59
FOXA2-202ENST00000419308 LINC00308Q8TCZ7 52 aa18.72■□□□□ 0.59
FOXA2-202ENST00000419308 CDIP1Q9H305 208 aa18.71■□□□□ 0.59
FOXA2-202ENST00000419308 A0A0U1RRA0 63 aa18.7■□□□□ 0.58
FOXA2-202ENST00000419308 PF4P02776 101 aa18.7■□□□□ 0.58
FOXA2-202ENST00000419308 PRIMA1Q86XR5 153 aa18.7■□□□□ 0.58
FOXA2-202ENST00000419308 LINC00482Q8N8I6 264 aa18.7■□□□□ 0.58
FOXA2-202ENST00000419308 RPL13AP40429 203 aaKnown RBP18.69■□□□□ 0.58
FOXA2-202ENST00000419308 GAGE6Q13070 117 aa18.68■□□□□ 0.58
FOXA2-202ENST00000419308 COX6CP09669 75 aa18.68■□□□□ 0.58
FOXA2-202ENST00000419308 TRBV6-8A0A0A6YYG3 113 aa18.67■□□□□ 0.58
FOXA2-202ENST00000419308 SCGB1A1P11684 91 aa18.66■□□□□ 0.58
FOXA2-202ENST00000419308 SOSTDC1Q6X4U4 206 aa18.65■□□□□ 0.58
FOXA2-202ENST00000419308 DEFB130BP0DP73 79 aa18.65■□□□□ 0.58
FOXA2-202ENST00000419308 DEFB130AP0DP74 79 aa18.65■□□□□ 0.58
FOXA2-202ENST00000419308 MEIG1Q5JSS6 88 aa18.65■□□□□ 0.58
FOXA2-202ENST00000419308 LINC01600Q96MT4 127 aa18.65■□□□□ 0.58
FOXA2-202ENST00000419308 CRLF1O75462 422 aa18.64■□□□□ 0.58
FOXA2-202ENST00000419308 IGLV4-60A0A075B6I1 120 aa18.64■□□□□ 0.57
FOXA2-202ENST00000419308 TRBV10-2A0A0K0K1G8 114 aa18.64■□□□□ 0.57
FOXA2-202ENST00000419308 HERV-K104P63124 156 aa18.64■□□□□ 0.57
FOXA2-202ENST00000419308 KIR2DL5BQ8NHK3 375 aa18.63■□□□□ 0.57
FOXA2-202ENST00000419308 CLEC2BQ92478 149 aa18.63■□□□□ 0.57
FOXA2-202ENST00000419308 FN1P02751 2386 aaKnown RBP18.62■□□□□ 0.57
FOXA2-202ENST00000419308 LY6G6DO95868 133 aa18.62■□□□□ 0.57
FOXA2-202ENST00000419308 CHCHD5Q9BSY4 110 aa18.62■□□□□ 0.57
FOXA2-202ENST00000419308 COPS9Q8WXC6 57 aa18.61■□□□□ 0.57
FOXA2-202ENST00000419308 GCN1Q92616 2671 aaKnown RBP18.61■□□□□ 0.57
FOXA2-202ENST00000419308 IGKV3OR2-268A0A0C4DH90 116 aa18.61■□□□□ 0.57
FOXA2-202ENST00000419308 LINC00612Q8N6U2 182 aa18.61■□□□□ 0.57
FOXA2-202ENST00000419308 NTN5Q8WTR8 489 aaPredicted RBP18.61■□□□□ 0.57
FOXA2-202ENST00000419308 VWFP04275 2813 aa18.6■□□□□ 0.57
FOXA2-202ENST00000419308 LST1O00453 97 aa18.59■□□□□ 0.57
FOXA2-202ENST00000419308 HECTD1Q9ULT8 2610 aa18.58■□□□□ 0.56
FOXA2-202ENST00000419308 X6R8D5 127 aa18.58■□□□□ 0.56
FOXA2-202ENST00000419308 COX7B2Q8TF08 81 aa18.57■□□□□ 0.56
FOXA2-202ENST00000419308 SPATA3Q8NHX4 192 aa18.56■□□□□ 0.56
FOXA2-202ENST00000419308 NBEAL2Q6ZNJ1 2754 aa18.56■□□□□ 0.56
FOXA2-202ENST00000419308 IGHV3OR16-9A0A0B4J2B5 98 aa18.55■□□□□ 0.56
FOXA2-202ENST00000419308 XGP55808 180 aa18.55■□□□□ 0.56
FOXA2-202ENST00000419308 C2orf82Q6UX34 121 aa18.55■□□□□ 0.56
FOXA2-202ENST00000419308 TEX49A0A1B0GTD5 131 aa18.54■□□□□ 0.56
FOXA2-202ENST00000419308 GYPEP15421 78 aa18.54■□□□□ 0.56
FOXA2-202ENST00000419308 MT-ATP8P03928 68 aa18.53■□□□□ 0.56
FOXA2-202ENST00000419308 TOMM7Q9P0U1 55 aa18.53■□□□□ 0.56
FOXA2-202ENST00000419308 NOTCH2Q04721 2471 aa18.53■□□□□ 0.56
FOXA2-202ENST00000419308 OTOGQ6ZRI0 2925 aa18.52■□□□□ 0.56
FOXA2-202ENST00000419308 H3BT86 120 aa18.52■□□□□ 0.56
FOXA2-202ENST00000419308 PPDPFQ9H3Y8 114 aa18.52■□□□□ 0.56
FOXA2-202ENST00000419308 TMEM262E9PQX1 116 aa18.52■□□□□ 0.55
FOXA2-202ENST00000419308 SHISA2Q6UWI4 295 aa18.52■□□□□ 0.55
FOXA2-202ENST00000419308 SMIM9A6NGZ8 99 aa18.51■□□□□ 0.55
FOXA2-202ENST00000419308 A0A087WZ39 114 aa18.49■□□□□ 0.55
FOXA2-202ENST00000419308 UBE2WQ96B02 151 aa18.49■□□□□ 0.55
FOXA2-202ENST00000419308 INAFM1C9JVW0 142 aa18.48■□□□□ 0.55
FOXA2-202ENST00000419308 C9orf66Q5T8R8 295 aa18.48■□□□□ 0.55
FOXA2-202ENST00000419308 LINC00959A0A1B0GUT2 108 aa18.48■□□□□ 0.55
FOXA2-202ENST00000419308 COX7A2LO14548 114 aa18.48■□□□□ 0.55
FOXA2-202ENST00000419308 MIR7-3HGQ8N6C7 128 aa18.48■□□□□ 0.55
FOXA2-202ENST00000419308 PRO0255Q9UI72 69 aa18.48■□□□□ 0.55
FOXA2-202ENST00000419308 NSD1Q96L73 2696 aaPredicted RBP18.47■□□□□ 0.55
FOXA2-202ENST00000419308 C5orf38Q86SI9 138 aa18.47■□□□□ 0.55
FOXA2-202ENST00000419308 FAM222AQ5U5X8 452 aa18.46■□□□□ 0.55
FOXA2-202ENST00000419308 TENM1Q9UKZ4 2725 aa18.45■□□□□ 0.54
FOXA2-202ENST00000419308 A0A1B0GUV1 79 aa18.43■□□□□ 0.54
FOXA2-202ENST00000419308 A0A096LPF7 62 aa18.42■□□□□ 0.54
FOXA2-202ENST00000419308 DEFB135Q30KP9 77 aa18.42■□□□□ 0.54
FOXA2-202ENST00000419308 LYRM9A8MSI8 78 aa18.41■□□□□ 0.54
FOXA2-202ENST00000419308 LINC00158P58513 81 aa18.41■□□□□ 0.54
FOXA2-202ENST00000419308 DEFB4AO15263 64 aa18.4■□□□□ 0.54
FOXA2-202ENST00000419308 SND1-IT1Q9HBX3 110 aa18.4■□□□□ 0.54
FOXA2-202ENST00000419308 PAX4O43316 350 aa18.39■□□□□ 0.53
FOXA2-202ENST00000419308 TRAV13-2A0A0B4J235 113 aa18.39■□□□□ 0.53
FOXA2-202ENST00000419308 IBA57-AS1B1ANH7 110 aa18.39■□□□□ 0.53
FOXA2-202ENST00000419308 XCL1P47992 114 aa18.39■□□□□ 0.53
FOXA2-202ENST00000419308 IGKV2-28A0A075B6P5 120 aa18.38■□□□□ 0.53
FOXA2-202ENST00000419308 TRAV8-4A0A0B4J246 113 aa18.38■□□□□ 0.53
FOXA2-202ENST00000419308 IGKV2D-28P01615 120 aa18.38■□□□□ 0.53
FOXA2-202ENST00000419308 LINC00337Q8N6G1 96 aa18.38■□□□□ 0.53
FOXA2-202ENST00000419308 CRPP02741 224 aa18.37■□□□□ 0.53
FOXA2-202ENST00000419308 SS18Q15532 418 aa18.37■□□□□ 0.53
FOXA2-202ENST00000419308 CCL18P55774 89 aa18.35■□□□□ 0.53
FOXA2-202ENST00000419308 CLPSL2Q6UWE3 100 aa18.35■□□□□ 0.53
FOXA2-202ENST00000419308 PFN2P35080 140 aa18.35■□□□□ 0.53
FOXA2-202ENST00000419308 DEFB121Q5J5C9 76 aa18.34■□□□□ 0.53
FOXA2-202ENST00000419308 IGHV4-28A0A0C4DH34 117 aa18.34■□□□□ 0.53
FOXA2-202ENST00000419308 RPL28P46779 137 aaKnown RBP18.34■□□□□ 0.53
FOXA2-202ENST00000419308 APOC4P55056 127 aa18.34■□□□□ 0.53
FOXA2-202ENST00000419308 C6orf226Q5I0X4 101 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms