RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 COL5A1-AS1Q5SY13 56 aa12.75□□□□□ -0.37
CIRBP-202ENST00000413636 TTTY13Q9BZ97 58 aa12.75□□□□□ -0.37
CIRBP-202ENST00000413636 DYNC2H1Q8NCM8 4307 aaKnown RBP12.74□□□□□ -0.37
CIRBP-202ENST00000413636 J3QQQ9 107 aa12.73□□□□□ -0.37
CIRBP-202ENST00000413636 LGALS3P17931 250 aaKnown RBP12.73□□□□□ -0.37
CIRBP-202ENST00000413636 CCL18P55774 89 aa12.73□□□□□ -0.37
CIRBP-202ENST00000413636 LINC00469Q8N7U9 141 aa12.73□□□□□ -0.37
CIRBP-202ENST00000413636 ZNF815PA8K554 130 aa12.73□□□□□ -0.37
CIRBP-202ENST00000413636 BVES-AS1Q5T3Y7 98 aa12.73□□□□□ -0.37
CIRBP-202ENST00000413636 LINC00242Q5T6M2 205 aa12.73□□□□□ -0.37
CIRBP-202ENST00000413636 LINC00588Q9Y4M8 146 aa12.73□□□□□ -0.37
CIRBP-202ENST00000413636 TMEM262E9PQX1 116 aa12.72□□□□□ -0.37
CIRBP-202ENST00000413636 TAL2Q16559 108 aa12.72□□□□□ -0.37
CIRBP-202ENST00000413636 TRAV13-1A0A0B4J241 112 aa12.71□□□□□ -0.37
CIRBP-202ENST00000413636 IGHV1-58A0A0C4DH39 117 aa12.71□□□□□ -0.37
CIRBP-202ENST00000413636 LELP1Q5T871 98 aa12.71□□□□□ -0.37
CIRBP-202ENST00000413636 TENM2Q9NT68 2774 aa12.71□□□□□ -0.38
CIRBP-202ENST00000413636 UBE2DNLQ8IWF7 75 aa12.7□□□□□ -0.38
CIRBP-202ENST00000413636 IGLV4-60A0A075B6I1 120 aa12.7□□□□□ -0.38
CIRBP-202ENST00000413636 SCGB1D4Q6XE38 83 aa12.7□□□□□ -0.38
CIRBP-202ENST00000413636 CCL25O15444 150 aa12.69□□□□□ -0.38
CIRBP-202ENST00000413636 IGHV3-30-3P0DP02 117 aa12.69□□□□□ -0.38
CIRBP-202ENST00000413636 RBX1P62877 108 aa12.69□□□□□ -0.38
CIRBP-202ENST00000413636 CDKN2A-AS1Q9UH64 79 aa12.69□□□□□ -0.38
CIRBP-202ENST00000413636 PLECQ15149 4684 aaKnown RBP12.68□□□□□ -0.38
CIRBP-202ENST00000413636 COX6A2Q02221 97 aa12.67□□□□□ -0.38
CIRBP-202ENST00000413636 ORAOV1Q8WV07 137 aa12.67□□□□□ -0.38
CIRBP-202ENST00000413636 TSPEAR-AS2P59090 65 aa12.66□□□□□ -0.38
CIRBP-202ENST00000413636 SPINK8P0C7L1 97 aa12.66□□□□□ -0.38
CIRBP-202ENST00000413636 WFDC10BQ8IUB3 73 aa12.66□□□□□ -0.38
CIRBP-202ENST00000413636 IGHV3-64A0A075B6Q5 118 aa12.65□□□□□ -0.38
CIRBP-202ENST00000413636 A6NDN8 102 aa12.65□□□□□ -0.38
CIRBP-202ENST00000413636 LINC00476Q8WZB0 136 aa12.65□□□□□ -0.38
CIRBP-202ENST00000413636 HIST1H4GQ99525 98 aa12.65□□□□□ -0.38
CIRBP-202ENST00000413636 UPK3BQ9BT76 320 aa12.65□□□□□ -0.38
CIRBP-202ENST00000413636 TRAV8-3A0A0A6YYJ7 113 aa12.64□□□□□ -0.39
CIRBP-202ENST00000413636 LY6G6CO95867 125 aa12.64□□□□□ -0.39
CIRBP-202ENST00000413636 SS18Q15532 418 aa12.64□□□□□ -0.39
CIRBP-202ENST00000413636 CEND1Q8N111 149 aa12.64□□□□□ -0.39
CIRBP-202ENST00000413636 TM2D2Q9BX73 214 aa12.64□□□□□ -0.39
CIRBP-202ENST00000413636 IGLV5-39A0A0G2JS06 123 aa12.63□□□□□ -0.39
CIRBP-202ENST00000413636 LINC00959A0A1B0GUT2 108 aa12.63□□□□□ -0.39
CIRBP-202ENST00000413636 GCSHP23434 173 aa12.62□□□□□ -0.39
CIRBP-202ENST00000413636 Q9H8V8 135 aa12.62□□□□□ -0.39
CIRBP-202ENST00000413636 SPANXB1Q9NS25 103 aaPredicted RBP12.62□□□□□ -0.39
CIRBP-202ENST00000413636 IGKV3OR2-268A0A0C4DH90 116 aa12.61□□□□□ -0.39
CIRBP-202ENST00000413636 NDUFA12Q9UI09 145 aa12.61□□□□□ -0.39
CIRBP-202ENST00000413636 SMIM1B2RUZ4 78 aa12.6□□□□□ -0.39
CIRBP-202ENST00000413636 SRSF9Q13242 221 aaKnown RBP eCLIP12.6□□□□□ -0.39
CIRBP-202ENST00000413636 IGHV3OR16-9A0A0B4J2B5 98 aa12.59□□□□□ -0.39
CIRBP-202ENST00000413636 A0A1B0GV90 55 aa12.59□□□□□ -0.39
CIRBP-202ENST00000413636 PTTG1IPP53801 180 aa12.59□□□□□ -0.39
CIRBP-202ENST00000413636 Q8N3U1 123 aa12.59□□□□□ -0.39
CIRBP-202ENST00000413636 ANGP03950 147 aaKnown RBP12.59□□□□□ -0.39
CIRBP-202ENST00000413636 LINC01561Q8N1V8 128 aa12.59□□□□□ -0.39
CIRBP-202ENST00000413636 A0A087WZ39 114 aa12.58□□□□□ -0.4
CIRBP-202ENST00000413636 TMEM238C9JI98 176 aa12.58□□□□□ -0.4
CIRBP-202ENST00000413636 IGHV3-30P01768 117 aa12.58□□□□□ -0.4
CIRBP-202ENST00000413636 IGHV3-33P01772 117 aa12.58□□□□□ -0.4
CIRBP-202ENST00000413636 IGHV3-30-5P0DP03 117 aa12.58□□□□□ -0.4
CIRBP-202ENST00000413636 LINC00269Q8N2A0 174 aa12.58□□□□□ -0.4
CIRBP-202ENST00000413636 LYSTQ99698 3801 aa12.58□□□□□ -0.4
CIRBP-202ENST00000413636 A0A0J9YXY3 114 aa12.57□□□□□ -0.4
CIRBP-202ENST00000413636 NDUFA1O15239 70 aa12.57□□□□□ -0.4
CIRBP-202ENST00000413636 DNAH10OSP0CZ25 163 aa12.57□□□□□ -0.4
CIRBP-202ENST00000413636 REG3AQ06141 175 aa12.57□□□□□ -0.4
CIRBP-202ENST00000413636 TMEM238LA0A1B0GVL6 79 aa12.56□□□□□ -0.4
CIRBP-202ENST00000413636 A6NJY4 79 aa12.56□□□□□ -0.4
CIRBP-202ENST00000413636 LINC01556Q5JQF7 62 aa12.56□□□□□ -0.4
CIRBP-202ENST00000413636 C10orf126Q8N4M7 172 aa12.56□□□□□ -0.4
CIRBP-202ENST00000413636 LCE6AA0A183 80 aa12.55□□□□□ -0.4
CIRBP-202ENST00000413636 FXYD2P54710 66 aa12.55□□□□□ -0.4
CIRBP-202ENST00000413636 TIMM17BO60830 172 aa12.55□□□□□ -0.4
CIRBP-202ENST00000413636 SMIM13P0DJ93 91 aa12.55□□□□□ -0.4
CIRBP-202ENST00000413636 Q6ZVH6 145 aa12.55□□□□□ -0.4
CIRBP-202ENST00000413636 TAX1BP3O14907 124 aa12.54□□□□□ -0.4
CIRBP-202ENST00000413636 HERV-K104P63124 156 aa12.54□□□□□ -0.4
CIRBP-202ENST00000413636 CD164L2Q6UWJ8 174 aa12.54□□□□□ -0.4
CIRBP-202ENST00000413636 CIRBPQ14011 172 aaKnown RBP12.53□□□□□ -0.4
CIRBP-202ENST00000413636 PRR34Q9NV39 138 aa12.53□□□□□ -0.4
CIRBP-202ENST00000413636 COX11Q9Y6N1 276 aa12.53□□□□□ -0.4
CIRBP-202ENST00000413636 XCL1P47992 114 aa12.52□□□□□ -0.4
CIRBP-202ENST00000413636 SFTA2Q6UW10 78 aa12.52□□□□□ -0.4
CIRBP-202ENST00000413636 COX7B2Q8TF08 81 aa12.52□□□□□ -0.4
CIRBP-202ENST00000413636 CLPSL2Q6UWE3 100 aa12.51□□□□□ -0.41
CIRBP-202ENST00000413636 ALMS1Q8TCU4 4167 aa12.51□□□□□ -0.41
CIRBP-202ENST00000413636 NBDYA0A0U1RRE5 68 aa12.51□□□□□ -0.41
CIRBP-202ENST00000413636 C5orf38Q86SI9 138 aa12.51□□□□□ -0.41
CIRBP-202ENST00000413636 CHCHD10Q8WYQ3 142 aaPredicted RBP12.51□□□□□ -0.41
CIRBP-202ENST00000413636 SPANXDQ9BXN6 97 aa12.51□□□□□ -0.41
CIRBP-202ENST00000413636 KRTAP1-5Q9BYS1 174 aa12.51□□□□□ -0.41
CIRBP-202ENST00000413636 SPANXCQ9NY87 97 aa12.51□□□□□ -0.41
CIRBP-202ENST00000413636 KLK12Q9UKR0 248 aa12.51□□□□□ -0.41
CIRBP-202ENST00000413636 TRAV8-4A0A0B4J246 113 aa12.5□□□□□ -0.41
CIRBP-202ENST00000413636 M0R2N4 97 aa12.5□□□□□ -0.41
CIRBP-202ENST00000413636 ZNF625Q96I27 306 aaPredicted RBP12.5□□□□□ -0.41
CIRBP-202ENST00000413636 NHP2Q9NX24 153 aaKnown RBP12.5□□□□□ -0.41
CIRBP-202ENST00000413636 RPL24P83731 157 aaKnown RBP12.49□□□□□ -0.41
CIRBP-202ENST00000413636 TTC32Q5I0X7 151 aa12.49□□□□□ -0.41
CIRBP-202ENST00000413636 VPS13DQ5THJ4 4388 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms