RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 HERVK_113P63121 156 aa10.74□□□□□ -0.69
CPSF7-202ENST00000394888 ANKRD29Q8N6D5 301 aa10.74□□□□□ -0.69
CPSF7-202ENST00000394888 TEN1Q86WV5 123 aa10.74□□□□□ -0.69
CPSF7-202ENST00000394888 ERG28Q9UKR5 140 aa10.73□□□□□ -0.69
CPSF7-202ENST00000394888 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.73□□□□□ -0.69
CPSF7-202ENST00000394888 LINC00308Q8TCZ7 52 aa10.73□□□□□ -0.69
CPSF7-202ENST00000394888 GEMIN7Q9H840 131 aaKnown RBP10.73□□□□□ -0.69
CPSF7-202ENST00000394888 CMC4P56277 68 aaPredicted RBP10.73□□□□□ -0.69
CPSF7-202ENST00000394888 Q9H8V8 135 aa10.73□□□□□ -0.69
CPSF7-202ENST00000394888 ICOSQ9Y6W8 199 aa10.72□□□□□ -0.69
CPSF7-202ENST00000394888 TRAV13-1A0A0B4J241 112 aa10.72□□□□□ -0.69
CPSF7-202ENST00000394888 H7C2G1 150 aa10.71□□□□□ -0.69
CPSF7-202ENST00000394888 FN1P02751 2386 aaKnown RBP10.71□□□□□ -0.7
CPSF7-202ENST00000394888 KIR2DL5BQ8NHK3 375 aa10.71□□□□□ -0.7
CPSF7-202ENST00000394888 TRBV6-8A0A0A6YYG3 113 aa10.7□□□□□ -0.7
CPSF7-202ENST00000394888 IGHV3OR16-9A0A0B4J2B5 98 aa10.7□□□□□ -0.7
CPSF7-202ENST00000394888 C22orf24Q9Y442 160 aa10.7□□□□□ -0.7
CPSF7-202ENST00000394888 PKD1L1Q8TDX9 2849 aa10.7□□□□□ -0.7
CPSF7-202ENST00000394888 H7C423 109 aa10.7□□□□□ -0.7
CPSF7-202ENST00000394888 TMEM243Q9BU79 118 aa10.7□□□□□ -0.7
CPSF7-202ENST00000394888 SLC25A20O43772 301 aa10.69□□□□□ -0.7
CPSF7-202ENST00000394888 CRLF1O75462 422 aa10.69□□□□□ -0.7
CPSF7-202ENST00000394888 LINC01620Q4KN68 170 aa10.69□□□□□ -0.7
CPSF7-202ENST00000394888 PPDPFQ9H3Y8 114 aa10.69□□□□□ -0.7
CPSF7-202ENST00000394888 SHISA2Q6UWI4 295 aa10.68□□□□□ -0.7
CPSF7-202ENST00000394888 TEP1Q99973 2627 aaKnown RBP10.68□□□□□ -0.7
CPSF7-202ENST00000394888 TRGV2A0A075B6R0 118 aa10.68□□□□□ -0.7
CPSF7-202ENST00000394888 CIDEAO60543 219 aa10.68□□□□□ -0.7
CPSF7-202ENST00000394888 IFITM1P13164 125 aa10.68□□□□□ -0.7
CPSF7-202ENST00000394888 CLEC2BQ92478 149 aa10.68□□□□□ -0.7
CPSF7-202ENST00000394888 C2CD3Q4AC94 2353 aa10.68□□□□□ -0.7
CPSF7-202ENST00000394888 C9JAW5 83 aa10.68□□□□□ -0.7
CPSF7-202ENST00000394888 FBN1P35555 2871 aaKnown RBP10.67□□□□□ -0.7
CPSF7-202ENST00000394888 PRSS2P07478 247 aa10.67□□□□□ -0.7
CPSF7-202ENST00000394888 PPDPFLQ8WWR9 84 aa10.67□□□□□ -0.7
CPSF7-202ENST00000394888 SIGMAR1Q99720 223 aa10.67□□□□□ -0.7
CPSF7-202ENST00000394888 XGP55808 180 aa10.66□□□□□ -0.7
CPSF7-202ENST00000394888 LYRM7Q5U5X0 104 aa10.66□□□□□ -0.7
CPSF7-202ENST00000394888 IGKV2-28A0A075B6P5 120 aa10.65□□□□□ -0.7
CPSF7-202ENST00000394888 LST1O00453 97 aa10.65□□□□□ -0.7
CPSF7-202ENST00000394888 IGKV2D-28P01615 120 aa10.65□□□□□ -0.7
CPSF7-202ENST00000394888 GAGE6Q13070 117 aa10.65□□□□□ -0.7
CPSF7-202ENST00000394888 DGAT2L7PQ6IED9 249 aa10.65□□□□□ -0.7
CPSF7-202ENST00000394888 INAFM1C9JVW0 142 aa10.65□□□□□ -0.7
CPSF7-202ENST00000394888 RPL13AP40429 203 aaKnown RBP10.65□□□□□ -0.7
CPSF7-202ENST00000394888 TRGV4A0A0C4DH28 118 aa10.63□□□□□ -0.71
CPSF7-202ENST00000394888 HIVEP2P31629 2446 aa10.63□□□□□ -0.71
CPSF7-202ENST00000394888 TRBV10-2A0A0K0K1G8 114 aa10.63□□□□□ -0.71
CPSF7-202ENST00000394888 MT-ATP8P03928 68 aa10.63□□□□□ -0.71
CPSF7-202ENST00000394888 ATXN8Q156A1 80 aa10.63□□□□□ -0.71
CPSF7-202ENST00000394888 Q8N3U1 123 aa10.63□□□□□ -0.71
CPSF7-202ENST00000394888 SCGB1C2P0DMR2 95 aa10.63□□□□□ -0.71
CPSF7-202ENST00000394888 A0A0U1RRA0 63 aa10.62□□□□□ -0.71
CPSF7-202ENST00000394888 TEX49A0A1B0GTD5 131 aa10.62□□□□□ -0.71
CPSF7-202ENST00000394888 A0A087WZ39 114 aa10.62□□□□□ -0.71
CPSF7-202ENST00000394888 SMAGPQ0VAQ4 97 aa10.62□□□□□ -0.71
CPSF7-202ENST00000394888 FAM218AQ96MZ4 157 aa10.62□□□□□ -0.71
CPSF7-202ENST00000394888 CITED1Q99966 193 aa10.62□□□□□ -0.71
CPSF7-202ENST00000394888 LINC00959A0A1B0GUT2 108 aa10.61□□□□□ -0.71
CPSF7-202ENST00000394888 DEFB130BP0DP73 79 aa10.61□□□□□ -0.71
CPSF7-202ENST00000394888 DEFB130AP0DP74 79 aa10.61□□□□□ -0.71
CPSF7-202ENST00000394888 SCGB1A1P11684 91 aa10.61□□□□□ -0.71
CPSF7-202ENST00000394888 DEFB121Q5J5C9 76 aa10.6□□□□□ -0.71
CPSF7-202ENST00000394888 LINC00337Q8N6G1 96 aa10.6□□□□□ -0.71
CPSF7-202ENST00000394888 PRIMA1Q86XR5 153 aa10.6□□□□□ -0.71
CPSF7-202ENST00000394888 COX7B2Q8TF08 81 aa10.6□□□□□ -0.71
CPSF7-202ENST00000394888 NTN5Q8WTR8 489 aaPredicted RBP10.6□□□□□ -0.71
CPSF7-202ENST00000394888 LYSTQ99698 3801 aa10.6□□□□□ -0.71
CPSF7-202ENST00000394888 CELA1Q9UNI1 258 aa10.6□□□□□ -0.71
CPSF7-202ENST00000394888 Q8NAQ8 132 aa10.59□□□□□ -0.71
CPSF7-202ENST00000394888 UBE2L6O14933 153 aa10.59□□□□□ -0.71
CPSF7-202ENST00000394888 HERV-K104P63124 156 aa10.59□□□□□ -0.71
CPSF7-202ENST00000394888 A0A1B0GUV1 79 aa10.58□□□□□ -0.72
CPSF7-202ENST00000394888 GYPEP15421 78 aa10.58□□□□□ -0.72
CPSF7-202ENST00000394888 Q1RN00 199 aa10.58□□□□□ -0.72
CPSF7-202ENST00000394888 FAM222AQ5U5X8 452 aa10.58□□□□□ -0.72
CPSF7-202ENST00000394888 ATRQ13535 2644 aa10.58□□□□□ -0.72
CPSF7-202ENST00000394888 J3QR89 54 aa10.57□□□□□ -0.72
CPSF7-202ENST00000394888 PF4P02776 101 aa10.57□□□□□ -0.72
CPSF7-202ENST00000394888 WIPF1O43516 503 aa10.57□□□□□ -0.72
CPSF7-202ENST00000394888 DEFB4AO15263 64 aa10.56□□□□□ -0.72
CPSF7-202ENST00000394888 TRAV8-4A0A0B4J246 113 aa10.56□□□□□ -0.72
CPSF7-202ENST00000394888 SMIM9A6NGZ8 99 aa10.56□□□□□ -0.72
CPSF7-202ENST00000394888 NOTCH2Q04721 2471 aa10.56□□□□□ -0.72
CPSF7-202ENST00000394888 KIAA0087Q14695 138 aa10.55□□□□□ -0.72
CPSF7-202ENST00000394888 MIR7-3HGQ8N6C7 128 aa10.55□□□□□ -0.72
CPSF7-202ENST00000394888 TENM3Q9P273 2699 aa10.55□□□□□ -0.72
CPSF7-202ENST00000394888 COX7A2LO14548 114 aa10.55□□□□□ -0.72
CPSF7-202ENST00000394888 DEFB135Q30KP9 77 aa10.54□□□□□ -0.72
CPSF7-202ENST00000394888 IGHV4-28A0A0C4DH34 117 aa10.54□□□□□ -0.72
CPSF7-202ENST00000394888 CCL18P55774 89 aa10.54□□□□□ -0.72
CPSF7-202ENST00000394888 Q8NDZ9 215 aa10.54□□□□□ -0.72
CPSF7-202ENST00000394888 CHCHD5Q9BSY4 110 aa10.54□□□□□ -0.72
CPSF7-202ENST00000394888 HUWE1Q7Z6Z7 4374 aaKnown RBP10.53□□□□□ -0.72
CPSF7-202ENST00000394888 H3BT86 120 aa10.53□□□□□ -0.72
CPSF7-202ENST00000394888 CIRBPQ14011 172 aaKnown RBP10.53□□□□□ -0.72
CPSF7-202ENST00000394888 C5orf38Q86SI9 138 aa10.53□□□□□ -0.72
CPSF7-202ENST00000394888 A0A096LPF7 62 aa10.53□□□□□ -0.72
CPSF7-202ENST00000394888 IGKV3OR2-268A0A0C4DH90 116 aa10.53□□□□□ -0.72
CPSF7-202ENST00000394888 C9orf66Q5T8R8 295 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms