RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 C1orf147Q96MC9 270 aaPredicted RBP5.3□□□□□ -1.56
SPTA1-201ENST00000368147 BBC3Q96PG8 261 aaPredicted RBP5.3□□□□□ -1.56
SPTA1-201ENST00000368147 CDPF1Q6NVV7 123 aa5.3□□□□□ -1.56
SPTA1-201ENST00000368147 SCXQ7RTU7 201 aa5.3□□□□□ -1.56
SPTA1-201ENST00000368147 CHCHD10Q8WYQ3 142 aaPredicted RBP5.3□□□□□ -1.56
SPTA1-201ENST00000368147 hDV103S1A0JD37 113 aa5.29□□□□□ -1.56
SPTA1-201ENST00000368147 PSPHP1O15172 72 aa5.29□□□□□ -1.56
SPTA1-201ENST00000368147 KPRPQ5T749 579 aaPredicted RBP5.29□□□□□ -1.56
SPTA1-201ENST00000368147 X6R8D5 127 aa5.29□□□□□ -1.56
SPTA1-201ENST00000368147 USP9XQ93008 2570 aaPredicted RBP5.29□□□□□ -1.56
SPTA1-201ENST00000368147 TLN1Q9Y490 2541 aaKnown RBP5.29□□□□□ -1.56
SPTA1-201ENST00000368147 FAM30AQ9NZY2 134 aa5.29□□□□□ -1.56
SPTA1-201ENST00000368147 A0A0J9YX75 114 aa5.29□□□□□ -1.56
SPTA1-201ENST00000368147 C10orf25Q5T742 122 aa5.29□□□□□ -1.56
SPTA1-201ENST00000368147 A0A0J9YXY3 114 aa5.29□□□□□ -1.56
SPTA1-201ENST00000368147 K7EMT4 169 aa5.29□□□□□ -1.56
SPTA1-201ENST00000368147 IGLV3-1P01715 115 aa5.28□□□□□ -1.56
SPTA1-201ENST00000368147 XAGE1AQ9HD64 81 aa5.28□□□□□ -1.56
SPTA1-201ENST00000368147 ODF1Q14990 250 aa5.28□□□□□ -1.56
SPTA1-201ENST00000368147 PATE2Q6UY27 113 aa5.28□□□□□ -1.56
SPTA1-201ENST00000368147 LINC01006Q8NI28 216 aa5.28□□□□□ -1.56
SPTA1-201ENST00000368147 NFE4Q86UQ8 179 aa5.28□□□□□ -1.56
SPTA1-201ENST00000368147 IGLV5-52A0A0A0MRZ9 124 aa5.28□□□□□ -1.56
SPTA1-201ENST00000368147 C3orf84H3BNL1 204 aa5.28□□□□□ -1.56
SPTA1-201ENST00000368147 TRBV10-1A0A0K0K1A3 114 aa5.28□□□□□ -1.56
SPTA1-201ENST00000368147 LINC00173Q6ZV60 143 aa5.28□□□□□ -1.56
SPTA1-201ENST00000368147 MUC7Q8TAX7 377 aa5.28□□□□□ -1.56
SPTA1-201ENST00000368147 LINC00467Q9BRT7 94 aa5.28□□□□□ -1.56
SPTA1-201ENST00000368147 LINC00474Q9P2X8 69 aa5.28□□□□□ -1.56
SPTA1-201ENST00000368147 ZNF702PQ9H963 129 aa5.28□□□□□ -1.56
SPTA1-201ENST00000368147 TRBV30A0A0K0K1B3 111 aa5.27□□□□□ -1.57
SPTA1-201ENST00000368147 ZFAND2AQ8N6M9 145 aa5.27□□□□□ -1.57
SPTA1-201ENST00000368147 CIRBP-AS1Q8TBR5 109 aa5.27□□□□□ -1.57
SPTA1-201ENST00000368147 A0A1B0GU69 56 aa5.27□□□□□ -1.57
SPTA1-201ENST00000368147 KRTAP27-1Q3LI81 207 aa5.27□□□□□ -1.57
SPTA1-201ENST00000368147 IBA57-AS1B1ANH7 110 aa5.27□□□□□ -1.57
SPTA1-201ENST00000368147 FSHBP01225 129 aa5.27□□□□□ -1.57
SPTA1-201ENST00000368147 ACYP2P14621 99 aa5.27□□□□□ -1.57
SPTA1-201ENST00000368147 SLPIP03973 132 aa5.26□□□□□ -1.57
SPTA1-201ENST00000368147 TRBV7-7A0A0K0K1E9 115 aa5.26□□□□□ -1.57
SPTA1-201ENST00000368147 COX17Q14061 63 aa5.26□□□□□ -1.57
SPTA1-201ENST00000368147 FBXL19-AS1Q494R0 122 aa5.26□□□□□ -1.57
SPTA1-201ENST00000368147 LUZP6Q538Z0 58 aa5.26□□□□□ -1.57
SPTA1-201ENST00000368147 Q6JHZ5 121 aa5.26□□□□□ -1.57
SPTA1-201ENST00000368147 SPTBN4Q9H254 2564 aa5.25□□□□□ -1.57
SPTA1-201ENST00000368147 EDN2P20800 178 aa5.25□□□□□ -1.57
SPTA1-201ENST00000368147 ESRGQ1W209 222 aa5.25□□□□□ -1.57
SPTA1-201ENST00000368147 WFDC13Q8IUB5 93 aa5.25□□□□□ -1.57
SPTA1-201ENST00000368147 IGLV1-47P01700 117 aa5.25□□□□□ -1.57
SPTA1-201ENST00000368147 SOSTDC1Q6X4U4 206 aa5.25□□□□□ -1.57
SPTA1-201ENST00000368147 PYGO1Q9Y3Y4 419 aa5.25□□□□□ -1.57
SPTA1-201ENST00000368147 U3KQK5 164 aa5.25□□□□□ -1.57
SPTA1-201ENST00000368147 PLAC8L1A1L4L8 177 aa5.25□□□□□ -1.57
SPTA1-201ENST00000368147 IGLV2-14P01704 120 aa5.25□□□□□ -1.57
SPTA1-201ENST00000368147 NCOR2Q9Y618 2525 aa5.25□□□□□ -1.57
SPTA1-201ENST00000368147 IGF2RP11717 2491 aa5.25□□□□□ -1.57
SPTA1-201ENST00000368147 LINC00208Q96KT6 92 aa5.25□□□□□ -1.57
SPTA1-201ENST00000368147 ABCA12Q86UK0 2595 aa5.25□□□□□ -1.57
SPTA1-201ENST00000368147 TMEM89A2RUT3 159 aa5.24□□□□□ -1.57
SPTA1-201ENST00000368147 LOC107984640A0A0U1RRK4 108 aa5.24□□□□□ -1.57
SPTA1-201ENST00000368147 ODF3BA8MYP8 253 aa5.24□□□□□ -1.57
SPTA1-201ENST00000368147 C11orf71Q6IPW1 123 aa5.24□□□□□ -1.57
SPTA1-201ENST00000368147 CCDC179H3BU77 68 aa5.24□□□□□ -1.57
SPTA1-201ENST00000368147 CRYGAP11844 174 aa5.24□□□□□ -1.57
SPTA1-201ENST00000368147 RNASE3P12724 160 aaKnown RBP5.24□□□□□ -1.57
SPTA1-201ENST00000368147 LINC00322Q6ZN03 302 aaPredicted RBP5.24□□□□□ -1.57
SPTA1-201ENST00000368147 A8MZ25 164 aa5.23□□□□□ -1.57
SPTA1-201ENST00000368147 LY6LH3BQJ8 138 aa5.23□□□□□ -1.57
SPTA1-201ENST00000368147 RBX1P62877 108 aa5.23□□□□□ -1.57
SPTA1-201ENST00000368147 LINC01554Q52M75 96 aa5.23□□□□□ -1.57
SPTA1-201ENST00000368147 RPL28P46779 137 aaKnown RBP5.23□□□□□ -1.57
SPTA1-201ENST00000368147 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.23□□□□□ -1.57
SPTA1-201ENST00000368147 NEXN-AS1Q8NBZ9 246 aa5.23□□□□□ -1.57
SPTA1-201ENST00000368147 NAV2Q8IVL1 2488 aa5.23□□□□□ -1.57
SPTA1-201ENST00000368147 TTTY13Q9BZ97 58 aa5.23□□□□□ -1.57
SPTA1-201ENST00000368147 ANKRD17O75179 2603 aaKnown RBP5.23□□□□□ -1.57
SPTA1-201ENST00000368147 FASNP49327 2511 aaKnown RBP5.23□□□□□ -1.57
SPTA1-201ENST00000368147 H0Y9P7 68 aa5.23□□□□□ -1.57
SPTA1-201ENST00000368147 ZNF80P51504 273 aaPredicted RBP5.23□□□□□ -1.57
SPTA1-201ENST00000368147 LST1O00453 97 aa5.22□□□□□ -1.57
SPTA1-201ENST00000368147 C1orf229Q6ZS94 237 aaPredicted RBP5.22□□□□□ -1.57
SPTA1-201ENST00000368147 FRMD6-AS1P0C7T7 363 aa5.22□□□□□ -1.57
SPTA1-201ENST00000368147 PRO3102Q9H379 93 aa5.22□□□□□ -1.57
SPTA1-201ENST00000368147 CRIPTQ9P021 101 aa5.22□□□□□ -1.57
SPTA1-201ENST00000368147 FAM167A-AS1Q96KT0 104 aa5.22□□□□□ -1.57
SPTA1-201ENST00000368147 TRBV6-8A0A0A6YYG3 113 aa5.21□□□□□ -1.58
SPTA1-201ENST00000368147 COL27A1Q8IZC6 1860 aaPredicted RBP5.21□□□□□ -1.58
SPTA1-201ENST00000368147 BEAN1Q3B7T3 259 aa5.2□□□□□ -1.58
SPTA1-201ENST00000368147 AVPP01185 164 aa5.2□□□□□ -1.58
SPTA1-201ENST00000368147 M0R378 163 aa5.2□□□□□ -1.58
SPTA1-201ENST00000368147 SYCNQ0VAF6 134 aa5.2□□□□□ -1.58
SPTA1-201ENST00000368147 Q8N6K4 173 aa5.2□□□□□ -1.58
SPTA1-201ENST00000368147 PSMG3-AS1Q96PY0 264 aa5.2□□□□□ -1.58
SPTA1-201ENST00000368147 XGP55808 180 aa5.2□□□□□ -1.58
SPTA1-201ENST00000368147 PRLHP81277 87 aa5.2□□□□□ -1.58
SPTA1-201ENST00000368147 TRBV6-5A0A0K0K1A5 114 aa5.2□□□□□ -1.58
SPTA1-201ENST00000368147 K7EQG2 157 aa5.2□□□□□ -1.58
SPTA1-201ENST00000368147 TRIAP1O43715 76 aa5.2□□□□□ -1.58
SPTA1-201ENST00000368147 C7orf65Q6ZTY9 151 aa5.2□□□□□ -1.58
SPTA1-201ENST00000368147 LINC01556Q5JQF7 62 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms