RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 DUX5Q96PT3 197 aa3.78□□□□□ -1.8
VPS50-202ENST00000305866 OTOGQ6ZRI0 2925 aa3.77□□□□□ -1.81
VPS50-202ENST00000305866 FAM74A4Q5TZK3 123 aa3.77□□□□□ -1.81
VPS50-202ENST00000305866 CFAP161Q6P656 301 aa3.77□□□□□ -1.81
VPS50-202ENST00000305866 BBC3Q96PG8 261 aaPredicted RBP3.77□□□□□ -1.81
VPS50-202ENST00000305866 DNAJC9-AS1A6NH13 148 aa3.77□□□□□ -1.81
VPS50-202ENST00000305866 LINC00643Q86TS7 51 aa3.77□□□□□ -1.81
VPS50-202ENST00000305866 ESM1Q9NQ30 184 aa3.77□□□□□ -1.81
VPS50-202ENST00000305866 ATRXP46100 2492 aa3.77□□□□□ -1.81
VPS50-202ENST00000305866 IGHV3OR16-9A0A0B4J2B5 98 aa3.77□□□□□ -1.81
VPS50-202ENST00000305866 A0A1B0GUV1 79 aa3.77□□□□□ -1.81
VPS50-202ENST00000305866 SNCGO76070 127 aa3.77□□□□□ -1.81
VPS50-202ENST00000305866 KRTAP10-9P60411 292 aa3.77□□□□□ -1.81
VPS50-202ENST00000305866 RPS28P62857 69 aaKnown RBP3.77□□□□□ -1.81
VPS50-202ENST00000305866 TMEM126AQ9H061 195 aa3.77□□□□□ -1.81
VPS50-202ENST00000305866 F5H697 171 aa3.76□□□□□ -1.81
VPS50-202ENST00000305866 MEIG1Q5JSS6 88 aa3.76□□□□□ -1.81
VPS50-202ENST00000305866 SPATA3Q8NHX4 192 aa3.76□□□□□ -1.81
VPS50-202ENST00000305866 MUC7Q8TAX7 377 aa3.76□□□□□ -1.81
VPS50-202ENST00000305866 ZFHX2Q9C0A1 2572 aaPredicted RBP3.76□□□□□ -1.81
VPS50-202ENST00000305866 MUC6Q6W4X9 2439 aa3.76□□□□□ -1.81
VPS50-202ENST00000305866 SMIM20Q8N5G0 67 aa3.76□□□□□ -1.81
VPS50-202ENST00000305866 IGHV3-73A0A0B4J1V6 119 aa3.76□□□□□ -1.81
VPS50-202ENST00000305866 IGHV4-28A0A0C4DH34 117 aa3.75□□□□□ -1.81
VPS50-202ENST00000305866 FAM236AA0A1B0GUQ0 79 aa3.75□□□□□ -1.81
VPS50-202ENST00000305866 FAM236BA0A1B0GV22 79 aa3.75□□□□□ -1.81
VPS50-202ENST00000305866 SMIM9A6NGZ8 99 aa3.75□□□□□ -1.81
VPS50-202ENST00000305866 H7C2G1 150 aa3.75□□□□□ -1.81
VPS50-202ENST00000305866 NPC2P61916 151 aa3.75□□□□□ -1.81
VPS50-202ENST00000305866 FHL2Q14192 279 aa3.75□□□□□ -1.81
VPS50-202ENST00000305866 Q9H8V8 135 aa3.75□□□□□ -1.81
VPS50-202ENST00000305866 LINC00846Q9NV44 126 aa3.75□□□□□ -1.81
VPS50-202ENST00000305866 A0A087WZ39 114 aa3.75□□□□□ -1.81
VPS50-202ENST00000305866 LOC107984640A0A0U1RRK4 108 aa3.75□□□□□ -1.81
VPS50-202ENST00000305866 CCL24O00175 119 aa3.75□□□□□ -1.81
VPS50-202ENST00000305866 COX7CP15954 63 aa3.75□□□□□ -1.81
VPS50-202ENST00000305866 USP9XQ93008 2570 aaPredicted RBP3.75□□□□□ -1.81
VPS50-202ENST00000305866 TTC28Q96AY4 2481 aa3.75□□□□□ -1.81
VPS50-202ENST00000305866 PRKDCP78527 4128 aaKnown RBP3.75□□□□□ -1.81
VPS50-202ENST00000305866 IGKV3-7A0A075B6H7 116 aa3.75□□□□□ -1.81
VPS50-202ENST00000305866 ATP5G1P05496 136 aa3.75□□□□□ -1.81
VPS50-202ENST00000305866 SMIM11BQ8TCY0 68 aa3.75□□□□□ -1.81
VPS50-202ENST00000305866 RP1L1Q8IWN7 2480 aaPredicted RBP3.74□□□□□ -1.81
VPS50-202ENST00000305866 IGHV3-38A0A0C4DH36 116 aa3.74□□□□□ -1.81
VPS50-202ENST00000305866 UQCRQO14949 82 aa3.74□□□□□ -1.81
VPS50-202ENST00000305866 HILS1P60008 231 aa3.74□□□□□ -1.81
VPS50-202ENST00000305866 KIAA0087Q14695 138 aa3.74□□□□□ -1.81
VPS50-202ENST00000305866 CACNA1AO00555 2505 aa3.74□□□□□ -1.81
VPS50-202ENST00000305866 HIST2H2BCQ6DN03 193 aa3.74□□□□□ -1.81
VPS50-202ENST00000305866 HIST2H2BDQ6DRA6 164 aa3.74□□□□□ -1.81
VPS50-202ENST00000305866 Q6JHZ5 121 aa3.74□□□□□ -1.81
VPS50-202ENST00000305866 LINC01006Q8NI28 216 aa3.74□□□□□ -1.81
VPS50-202ENST00000305866 CENPEQ02224 2701 aa3.74□□□□□ -1.81
VPS50-202ENST00000305866 MALP21145 153 aa3.74□□□□□ -1.81
VPS50-202ENST00000305866 RPL36AP83881 106 aaKnown RBP3.74□□□□□ -1.81
VPS50-202ENST00000305866 C3orf56Q8N813 242 aa3.74□□□□□ -1.81
VPS50-202ENST00000305866 RPL36ALQ969Q0 106 aaKnown RBP3.74□□□□□ -1.81
VPS50-202ENST00000305866 IBA57-AS1B1ANH7 110 aa3.73□□□□□ -1.81
VPS50-202ENST00000305866 IGKV3-20P01619 116 aa3.73□□□□□ -1.81
VPS50-202ENST00000305866 CCL18P55774 89 aa3.73□□□□□ -1.81
VPS50-202ENST00000305866 DEFB136Q30KP8 78 aa3.73□□□□□ -1.81
VPS50-202ENST00000305866 IGLV4-60A0A075B6I1 120 aa3.73□□□□□ -1.81
VPS50-202ENST00000305866 NDUFC2O95298 119 aa3.72□□□□□ -1.81
VPS50-202ENST00000305866 DPH3Q96FX2 82 aa3.72□□□□□ -1.81
VPS50-202ENST00000305866 SPTAN1Q13813 2472 aaKnown RBP3.72□□□□□ -1.81
VPS50-202ENST00000305866 HUWE1Q7Z6Z7 4374 aaKnown RBP3.72□□□□□ -1.81
VPS50-202ENST00000305866 FBN1P35555 2871 aaKnown RBP3.72□□□□□ -1.81
VPS50-202ENST00000305866 TRBV6-8A0A0A6YYG3 113 aa3.72□□□□□ -1.81
VPS50-202ENST00000305866 BAALC-AS2P0C853 105 aa3.72□□□□□ -1.81
VPS50-202ENST00000305866 COX17Q14061 63 aa3.72□□□□□ -1.81
VPS50-202ENST00000305866 LINC00482Q8N8I6 264 aa3.72□□□□□ -1.81
VPS50-202ENST00000305866 FRAS1Q86XX4 4008 aa3.72□□□□□ -1.81
VPS50-202ENST00000305866 IGF2RP11717 2491 aa3.72□□□□□ -1.81
VPS50-202ENST00000305866 DOPEY1Q5JWR5 2465 aa3.72□□□□□ -1.81
VPS50-202ENST00000305866 M0R2N4 97 aa3.72□□□□□ -1.81
VPS50-202ENST00000305866 CIRBPQ14011 172 aaKnown RBP3.72□□□□□ -1.81
VPS50-202ENST00000305866 Q6ZTI0 123 aa3.72□□□□□ -1.81
VPS50-202ENST00000305866 STHQ8IWL8 128 aa3.72□□□□□ -1.81
VPS50-202ENST00000305866 C11orf44Q8N8P7 122 aa3.72□□□□□ -1.81
VPS50-202ENST00000305866 TMEM243Q9BU79 118 aa3.72□□□□□ -1.81
VPS50-202ENST00000305866 Q9HAA7 133 aa3.72□□□□□ -1.81
VPS50-202ENST00000305866 COL6A6A6NMZ7 2263 aa3.72□□□□□ -1.81
VPS50-202ENST00000305866 PLA2G2AP14555 144 aa3.71□□□□□ -1.81
VPS50-202ENST00000305866 DYNLRB2Q8TF09 96 aa3.71□□□□□ -1.81
VPS50-202ENST00000305866 X6R8D5 127 aa3.71□□□□□ -1.81
VPS50-202ENST00000305866 SORL1Q92673 2214 aa3.71□□□□□ -1.82
VPS50-202ENST00000305866 TRAV13-2A0A0B4J235 113 aa3.71□□□□□ -1.82
VPS50-202ENST00000305866 KRTAP10-3P60369 221 aa3.71□□□□□ -1.82
VPS50-202ENST00000305866 Q8IZM0 81 aa3.71□□□□□ -1.82
VPS50-202ENST00000305866 CELA1Q9UNI1 258 aa3.71□□□□□ -1.82
VPS50-202ENST00000305866 COX6CP09669 75 aa3.71□□□□□ -1.82
VPS50-202ENST00000305866 HIVEP1P15822 2718 aa3.71□□□□□ -1.82
VPS50-202ENST00000305866 HECTD4Q9Y4D8 3996 aa3.71□□□□□ -1.82
VPS50-202ENST00000305866 GVQW2A0A096LPI5 108 aaPredicted RBP3.7□□□□□ -1.82
VPS50-202ENST00000305866 RPL18AQ02543 176 aaKnown RBP3.7□□□□□ -1.82
VPS50-202ENST00000305866 FAM19A5Q7Z5A7 132 aaPredicted RBP3.7□□□□□ -1.82
VPS50-202ENST00000305866 PRIMA1Q86XR5 153 aa3.7□□□□□ -1.82
VPS50-202ENST00000305866 PTPRZ1P23471 2315 aaPredicted RBP3.7□□□□□ -1.82
VPS50-202ENST00000305866 LYRM9A8MSI8 78 aa3.7□□□□□ -1.82
VPS50-202ENST00000305866 COX7B2Q8TF08 81 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms