RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 Gng5Q80SZ7 68 aa11.73□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Sox21Q811W0 276 aa11.73□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Igkv6-15A0A140T8M5 115 aa11.73□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Ss18Q62280 418 aa11.73□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Fam162bQ9CX19 157 aa11.73□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Spry4Q9WTP2 300 aa11.73□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Trav6n-5A0A075B621 112 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Trav6-5A0A075B6B5 112 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Gm15091B1AZM2 449 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Prss32E9Q409 334 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Tnfsf11O35235 316 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Thy1P01831 162 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Sumo2P61957 95 aaKnown RBP11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Bsph1Q3UW26 133 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Wdr83osQ6ZWX0 106 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Cd200r1Q9ES57 326 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Trav16nA0A075B634 117 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Trav16A0A075B653 116 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Trav7-4A0A075B6C1 113 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Rpl36-ps4A0A140T8U4 117 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Gm36368A0A1D5RLK8 91 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Gm21874J3QNZ6 232 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Ccl6P27784 116 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Gm10803Q3TZS6 135 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Trav7d-4Q5R1H9 113 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Klk7Q91VE3 249 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 SpxD3Z752 116 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Rnf212F6TQD1 307 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Znf146Q8BQN6 292 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Phlda3Q9WV95 125 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Igkv4-63A0A0G2JFU6 117 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 LfngO09010 378 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Tnfsf15Q5UBV8 252 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Znf22Q9ERU3 237 aa11.72□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Gstp2P46425 210 aa11.71□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Defb30Q30KN4 75 aa11.71□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Gm10912Q3UXH0 145 aa11.71□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Tmprss12Q3V0Q7 336 aa11.71□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Gm10192Q3V0S1 108 aa11.71□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Olfr223Q8VF69 319 aa11.71□□□□□ -0.53
Col2a1-202ENSMUST00000088355 MNCb-2875Q9DCB3 74 aa11.71□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Gm6871L7N248 545 aa11.71□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Nkx2-8O70584 235 aa11.71□□□□□ -0.53
Col2a1-202ENSMUST00000088355 CirbpP60824 172 aaKnown RBP11.71□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Gm12253Q5NC48 229 aa11.71□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Vmn1r54Q9EPB8 315 aa11.71□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Pmaip1Q9JM54 103 aa11.71□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Hils1Q9QYL0 170 aa11.71□□□□□ -0.53
Col2a1-202ENSMUST00000088355 Nup210lQ9D2F7 1881 aa11.71□□□□□ -0.53
Col2a1-202ENSMUST00000088355 1700001C19RikQ8K168 210 aa11.71□□□□□ -0.54
Col2a1-202ENSMUST00000088355 CenpvQ9CXS4 252 aa11.71□□□□□ -0.54
Col2a1-202ENSMUST00000088355 1700025B11RikA0A087WNZ6 93 aa11.71□□□□□ -0.54
Col2a1-202ENSMUST00000088355 6430628N08RikA0A0U1RQ45 177 aa11.71□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Csn3P06796 181 aa11.71□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Zfp677Q6PEP4 634 aa11.71□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Il19Q8CJ70 176 aa11.71□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Tbx19Q99ME7 446 aa11.71□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Spcs1Q9D958 161 aa11.71□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Efnb3O35393 340 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Rpl23P62830 140 aaKnown RBP11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Otx1P80205 355 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Cops9Q3U898 57 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Ccl12Q62401 104 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Gm4894Q8CA09 118 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Vmn1r70Q8R254 298 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Rbm38Q62176 237 aaKnown RBP11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Cxcl14Q9WUQ5 99 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Gpr132Q9Z282 382 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Wnk1P83741 2377 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Trav4-4-dv10A0A075B651 110 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Ighv5-12-4A0A0A6YWG4 117 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Igkv14-130A0A0G2JF45 117 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Ucp1P12242 307 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Supt4h1aP63271 117 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Ifitm10Q8BR26 201 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 ArtnQ9Z0L2 224 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Zic3Q62521 466 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Saxo2Q8BQB6 394 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Rchy1Q9CR50 261 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Tmem89Q9DA04 169 aa11.7□□□□□ -0.54
Col2a1-202ENSMUST00000088355 PpyP10601 100 aa11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Defa-rs12P50716 91 aa11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 GrhprQ91Z53 328 aa11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Gm16442D3YZG3 307 aa11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Smim13E9Q942 88 aa11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 P01812 117 aa11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 TbpP29037 316 aa11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Dnase2P56542 353 aa11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Plxnb1Q8CJH3 2119 aa11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Tmem167aQ9CR64 72 aa11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Notch3Q61982 2318 aa11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Gm29666A0A087WQ99 126 aa11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Shisal1Q0VBP7 198 aa11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Gm10447Q3UQ92 135 aa11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Gm21394Q497R7 227 aa11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Spata46Q4FZF2 204 aa11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Sh3bgrl3Q91VW3 93 aa11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Rbmxl2Q9DAE2 385 aaKnown RBP11.69□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Eml5Q8BQM8 1977 aa11.68□□□□□ -0.54
Col2a1-202ENSMUST00000088355 Gm29644A0A087WPG2 191 aa11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 63.5 ms