RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Cacna1eQ61290 2272 aa15.06■□□□□ 0
Scaf11-201ENSMUST00000047835 Psg18B2RSG7 476 aa15.06■□□□□ 0
Scaf11-201ENSMUST00000047835 SpxD3Z752 116 aa15.06■□□□□ 0
Scaf11-201ENSMUST00000047835 Il1f10Q8R459 152 aa15.06■□□□□ 0
Scaf11-201ENSMUST00000047835 Ormdl3Q9CPZ6 153 aa15.06■□□□□ 0
Scaf11-201ENSMUST00000047835 Wnt2P21552 360 aa15.05■□□□□ 0
Scaf11-201ENSMUST00000047835 Prss32E9Q409 334 aa15.05■□□□□ 0
Scaf11-201ENSMUST00000047835 Cdx1P18111 268 aa15.05■□□□□ 0
Scaf11-201ENSMUST00000047835 Sumo2P61957 95 aaKnown RBP15.05■□□□□ 0
Scaf11-201ENSMUST00000047835 EpopQ7TNS8 369 aa15.05■□□□□ 0
Scaf11-201ENSMUST00000047835 Prss22Q9ER10 306 aa15.05■□□□□ 0
Scaf11-201ENSMUST00000047835 Cacna1gQ5SUF7 2381 aa15.05■□□□□ 0
Scaf11-201ENSMUST00000047835 Asxl3Q8C4A5 2259 aa15.05■□□□□ 0
Scaf11-201ENSMUST00000047835 Amn1B8JKV0 258 aa15.05■□□□□ -0
Scaf11-201ENSMUST00000047835 Shisal1Q0VBP7 198 aa15.05■□□□□ -0
Scaf11-201ENSMUST00000047835 Wdr83osQ6ZWX0 106 aa15.05■□□□□ -0
Scaf11-201ENSMUST00000047835 Ighv3-4A0A0A6YXF1 117 aa15.05■□□□□ -0
Scaf11-201ENSMUST00000047835 Ndufaf3Q9JKL4 185 aa15.05■□□□□ -0
Scaf11-201ENSMUST00000047835 Gm9242J3QNY1 357 aa15.05■□□□□ -0
Scaf11-201ENSMUST00000047835 Defb26Q30KN7 186 aa15.05■□□□□ -0
Scaf11-201ENSMUST00000047835 3110018I06RikQ9CXS0 120 aa15.05■□□□□ -0
Scaf11-201ENSMUST00000047835 Ifitm5O88728 134 aa15.04■□□□□ -0
Scaf11-201ENSMUST00000047835 Bsph1Q3UW26 133 aa15.04■□□□□ -0
Scaf11-201ENSMUST00000047835 Zfp677Q6PEP4 634 aa15.04■□□□□ -0
Scaf11-201ENSMUST00000047835 Trav7-5A0A0G2JFX6 112 aa15.04■□□□□ -0
Scaf11-201ENSMUST00000047835 Olfr748E9Q9Z0 307 aa15.04■□□□□ -0
Scaf11-201ENSMUST00000047835 Olfr235E9Q9Z6 312 aa15.04■□□□□ -0
Scaf11-201ENSMUST00000047835 Glrx5Q80Y14 152 aa15.04■□□□□ -0
Scaf11-201ENSMUST00000047835 Spsb3Q571F5 354 aa15.04■□□□□ -0
Scaf11-201ENSMUST00000047835 Gm17732E9Q5I2 61 aa15.04■□□□□ -0
Scaf11-201ENSMUST00000047835 Edn3P48299 214 aa15.04■□□□□ -0
Scaf11-201ENSMUST00000047835 Ighv1-36A0A0A6YXT2 117 aa15.04■□□□□ -0
Scaf11-201ENSMUST00000047835 Q4KKZ1 196 aa15.04■□□□□ -0
Scaf11-201ENSMUST00000047835 Znrd1Q791N7 123 aa15.04■□□□□ -0
Scaf11-201ENSMUST00000047835 Il3raP26952 396 aa15.03■□□□□ -0
Scaf11-201ENSMUST00000047835 Gm21394Q497R7 227 aa15.03■□□□□ -0
Scaf11-201ENSMUST00000047835 Gm16442D3YZG3 307 aa15.03■□□□□ -0
Scaf11-201ENSMUST00000047835 P01725 110 aa15.03■□□□□ -0
Scaf11-201ENSMUST00000047835 Tmprss12Q3V0Q7 336 aa15.03■□□□□ -0
Scaf11-201ENSMUST00000047835 Tmem167aQ9CR64 72 aa15.03■□□□□ -0
Scaf11-201ENSMUST00000047835 Mrps11Q9DCA2 191 aaKnown RBP15.03■□□□□ -0
Scaf11-201ENSMUST00000047835 Rai1Q61818 1889 aa15.03■□□□□ -0
Scaf11-201ENSMUST00000047835 D830044I16RikA0A1D5RM53 117 aa15.02■□□□□ -0
Scaf11-201ENSMUST00000047835 Scgb1b3J3QJY4 93 aa15.02■□□□□ -0
Scaf11-201ENSMUST00000047835 Rnf5O35445 180 aa15.02■□□□□ -0
Scaf11-201ENSMUST00000047835 IappP12968 93 aa15.02■□□□□ -0
Scaf11-201ENSMUST00000047835 RlfA2A7F4 1918 aa15.02■□□□□ -0
Scaf11-201ENSMUST00000047835 Mrpl36Q99N90 102 aa15.02□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Hyls1Q9CXX0 307 aa15.02□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Susd2Q9DBX3 820 aa15.02□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Gm10803Q3TZS6 135 aa15.02□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Fhl4Q8CDC8 279 aa15.02□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Gpr132Q9Z282 382 aa15.02□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Tcrg-V6A0A075B5Y8 134 aa15.01□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Defa24Q5G865 93 aa15.01□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Olfr322Q5NCC8 327 aa15.01□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Nat6Q9R123 314 aa15.01□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Sap30O88574 220 aa15.01□□□□□ -0.01
Scaf11-201ENSMUST00000047835 NdpP48744 131 aa15.01□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Saxo2Q8BQB6 394 aa15.01□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Tbx19Q99ME7 446 aa15.01□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Gstp2P46425 210 aa15.01□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Gm12253Q5NC48 229 aa15.01□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Igkv4-80A0A075B5L7 116 aa15□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Gm15080A2BI02 449 aa15□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Mgst3Q9CPU4 153 aa15□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Zfp11P10751 647 aa15□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Cep250Q60952 2414 aa15□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Igkv6-15A0A140T8M5 115 aa15□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Q8BTC1 67 aa15□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Gm10881P01642 115 aa15□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Usmg5Q78IK2 58 aa15□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Rbmxl2Q9DAE2 385 aaKnown RBP15□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Gm21874J3QNZ6 232 aa15□□□□□ -0.01
Scaf11-201ENSMUST00000047835 C1ql4Q4ZJM9 238 aa15□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Fbxl7Q5BJ29 491 aa15□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Rnase6Q9D244 153 aa15□□□□□ -0.01
Scaf11-201ENSMUST00000047835 GlmpQ9JHJ3 404 aa15□□□□□ -0.01
Scaf11-201ENSMUST00000047835 St6galnac6Q9JM95 333 aa15□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Igkv4-90A0A075B5L3 117 aa14.99□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Gm29644A0A087WPG2 191 aa14.99□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Znf146Q8BQN6 292 aa14.99□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Trav4-4-dv10A0A075B651 110 aa14.99□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Pax1P09084 446 aa14.99□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Zfp27P10077 819 aa14.99□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Olfr149Q60888 311 aa14.99□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Trav9-1A0A075B601 112 aa14.99□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Igkv5-37A0A140T8N4 115 aa14.99□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Cotl1Q9CQI6 142 aa14.99□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Slc25a39Q9D8K8 359 aa14.99□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Iah1Q9DB29 249 aa14.99□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Trbv13-3A0A0B4J1H2 113 aa14.98□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Gm12845A0A0N4SUM5 588 aa14.98□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Ascl2O35885 263 aa14.98□□□□□ -0.01
Scaf11-201ENSMUST00000047835 CirbpP60824 172 aaKnown RBP14.98□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Spry4Q9WTP2 300 aa14.98□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Dock10Q8BZN6 2150 aa14.98□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Trav6n-5A0A075B621 112 aa14.98□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Trav6-5A0A075B6B5 112 aa14.98□□□□□ -0.01
Scaf11-201ENSMUST00000047835 Igkv13-84A0A140T8N3 115 aa14.98□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 63.3 ms