RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Scn9aQ62205 1984 aa11.92□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Snx22Q8C084 192 aa11.92□□□□□ -0.5
Col4a1-201ENSMUST00000033898 2200002J24RikQ9D807 110 aa11.92□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Dnajc13D4AFX7 2248 aaKnown RBP11.92□□□□□ -0.5
Col4a1-201ENSMUST00000033898 MycbQ6P8Z1 170 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 4931422A03RikA2BHN9 113 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Znf329Q6GQR8 522 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Gm45785A0A1B0GT05 94 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 OdamA1E960 273 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Csf2rb2P26954 878 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Gm21370Q3T9V6 190 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Foxr2Q3UM89 302 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Gm94Q3V2D2 93 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Lyzl1Q9CPX3 148 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Zfp646Q6NV66 1788 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Ms4a12A0A087WSB9 263 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Saa3P04918 122 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 SlaQ60898 281 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Gng7Q61016 68 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Cysltr1Q99JA4 352 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Hbb-b2P02089 147 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Wbp2nlQ9D529 359 aa11.91□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Wnk2Q3UH66 2149 aa11.9□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Fblim1Q71FD7 375 aa11.9□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Ighv1-34A0A075B5V2 117 aa11.9□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Igkv8-24A0A140T8P5 121 aa11.9□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Gm26727M0QWT1 121 aa11.9□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Gm6040Q4QY32 63 aa11.9□□□□□ -0.5
Col4a1-201ENSMUST00000033898 PcolceQ61398 468 aa11.9□□□□□ -0.5
Col4a1-201ENSMUST00000033898 AgerQ62151 402 aa11.9□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Vmn1r197Q8R265 298 aa11.9□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Ighv1-7A0A075B5T7 117 aa11.9□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Igkv6-32A0A140T8N9 115 aa11.9□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Gtsf1lQ9CWD0 151 aa11.9□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Zfp27P10077 819 aa11.9□□□□□ -0.5
Col4a1-201ENSMUST00000033898 Trav12d-1A0N8R0 115 aa11.9□□□□□ -0.51
Col4a1-201ENSMUST00000033898 H2-DMb1P35737 261 aa11.9□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Morn2Q6UL01 79 aa11.9□□□□□ -0.51
Col4a1-201ENSMUST00000033898 MturnQ8CGA4 131 aa11.9□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Loxhd1C8YR32 2068 aa11.9□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Igkv9-124A0A0G2JDR3 117 aa11.89□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Ms4a8Q99N10 290 aa11.89□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Gm37388A0A0A6YY46 143 aa11.89□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Gm45717A0A1B0GT68 152 aa11.89□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Trav3-3Q5R1C3 114 aa11.89□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Spock3Q8BKV0 436 aa11.89□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Dock6Q8VDR9 2080 aa11.89□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Igkv4-68A0A0B4J1I7 117 aa11.89□□□□□ -0.51
Col4a1-201ENSMUST00000033898 B1ARW8 110 aa11.89□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Gm10428J3QNV7 132 aa11.89□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Gm20854Q62461 227 aa11.89□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Ints1Q6P4S8 2195 aa11.89□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Gm28038F7BCN9 126 aa11.89□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Cd200r5Q8BTP3 270 aa11.89□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Gm44973A0A140LJJ1 189 aa11.88□□□□□ -0.51
Col4a1-201ENSMUST00000033898 P04212 136 aa11.88□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Tmem241Q3UME2 297 aa11.88□□□□□ -0.51
Col4a1-201ENSMUST00000033898 QrfpQ8CE23 124 aa11.88□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Pradc1Q9D9N8 188 aa11.88□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Trbv31A0A075B5J5 111 aa11.88□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Eif4ebp2P70445 120 aa11.88□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Tcrg-V6A0A075B5Y8 134 aa11.88□□□□□ -0.51
Col4a1-201ENSMUST00000033898 E430018J23RikE9PZQ8 461 aa11.88□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Pglyrp4Q0VB07 374 aa11.88□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Zswim8Q3UHH1 1832 aaKnown RBP11.88□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Ighv1-26A0A075B5V0 117 aa11.87□□□□□ -0.51
Col4a1-201ENSMUST00000033898 AdmP97297 184 aa11.87□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Tmem29A2ANF5 204 aa11.87□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Nat8b-psE0CYC6 232 aa11.87□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Hist1h1tQ07133 208 aa11.87□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Ypel2Q65Z95 119 aa11.87□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Rnf125Q9D9R0 233 aa11.87□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Ypel1Q9ESC7 118 aa11.87□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Ca11O70354 328 aa11.87□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Efnb3O35393 340 aa11.87□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Fbln7Q501P1 440 aa11.87□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Chac1Q8R3J5 223 aa11.87□□□□□ -0.51
Col4a1-201ENSMUST00000033898 GrhprQ91Z53 328 aa11.87□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Trbv1A0A0B4J1G7 116 aa11.87□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Gkn1Q9CR36 201 aa11.87□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Pappa2E9PZ87 1789 aa11.87□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Spred3Q6P6N5 408 aa11.86□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Fbxl15Q91W61 300 aa11.86□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Iba57Q8CAK1 358 aaKnown RBP11.86□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Abca7Q91V24 2159 aa11.86□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Rnf212F6TQD1 307 aa11.86□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Gm7102J3QQ10 178 aa11.86□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Cxcl13O55038 109 aa11.86□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Iglc3P01845 104 aa11.86□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Trav16d-dv11A0A075B617 117 aa11.86□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Isg15Q64339 161 aaKnown RBP11.86□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Lsm4Q9QXA5 137 aaKnown RBP11.86□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Ighv1-15A0A0A6YXA5 117 aa11.86□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Defb26Q30KN7 186 aa11.86□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Casp8ap2Q9WUF3 1962 aa11.85□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Pex7P97865 318 aa11.85□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Cacna1aP97445 2368 aa11.85□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Lypd8Q9D7S0 255 aa11.85□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Fer1l5P0DM40 2038 aa11.85□□□□□ -0.51
Col4a1-201ENSMUST00000033898 Gm29423A0A087WRM1 55 aa11.85□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 55.1 ms