RNA–Protein interactions for RNA: ENST00000639824.1

HNRNPU-221, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-221ENST00000639824 UBE2D3P61077 147 aa8.1□□□□□ -1.11
HNRNPU-221ENST00000639824 UBE2D2P62837 147 aa8.1□□□□□ -1.11
HNRNPU-221ENST00000639824 HERVK_113P63121 156 aa8.1□□□□□ -1.11
HNRNPU-221ENST00000639824 FAM19A3Q7Z5A8 133 aa8.1□□□□□ -1.11
HNRNPU-221ENST00000639824 LINC00482Q8N8I6 264 aa8.1□□□□□ -1.11
HNRNPU-221ENST00000639824 CSNK1G2-AS1Q8NCQ2 148 aa8.1□□□□□ -1.11
HNRNPU-221ENST00000639824 FAM104AQ969W3 186 aa8.1□□□□□ -1.11
HNRNPU-221ENST00000639824 NOP10Q9NPE3 64 aaKnown RBP8.1□□□□□ -1.11
HNRNPU-221ENST00000639824 CHD6Q8TD26 2715 aa8.1□□□□□ -1.11
HNRNPU-221ENST00000639824 IGLV5-45A0A087WSX0 123 aa8.09□□□□□ -1.11
HNRNPU-221ENST00000639824 IGHV3-38A0A0C4DH36 116 aa8.09□□□□□ -1.11
HNRNPU-221ENST00000639824 Q6ZUT4 128 aa8.09□□□□□ -1.11
HNRNPU-221ENST00000639824 C9orf66Q5T8R8 295 aa8.08□□□□□ -1.12
HNRNPU-221ENST00000639824 CEMP1Q6PRD7 247 aaPredicted RBP8.08□□□□□ -1.12
HNRNPU-221ENST00000639824 VSIG2Q96IQ7 327 aa8.08□□□□□ -1.12
HNRNPU-221ENST00000639824 KRTAP9-2Q9BYQ4 174 aa8.08□□□□□ -1.12
HNRNPU-221ENST00000639824 Q9UF83 564 aa8.08□□□□□ -1.12
HNRNPU-221ENST00000639824 PLAC8L1A1L4L8 177 aa8.07□□□□□ -1.12
HNRNPU-221ENST00000639824 SMIM9A6NGZ8 99 aa8.07□□□□□ -1.12
HNRNPU-221ENST00000639824 TIMM17BO60830 172 aa8.07□□□□□ -1.12
HNRNPU-221ENST00000639824 TMEM101Q96IK0 257 aa8.07□□□□□ -1.12
HNRNPU-221ENST00000639824 UNC79Q9P2D8 2635 aa8.07□□□□□ -1.12
HNRNPU-221ENST00000639824 WNK1Q9H4A3 2382 aa8.07□□□□□ -1.12
HNRNPU-221ENST00000639824 A0A0B4J2C4 111 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 TRGV4A0A0C4DH28 118 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 A0A0J9YXY3 114 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 UBE2L6O14933 153 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 GAGE7O76087 117 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 APOMO95445 188 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 GAGE12FP0CL80 117 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 GAGE12GP0CL81 117 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 GAGE12IP0CL82 117 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 RBX1P62877 108 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 ZFAND6Q6FIF0 208 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 SBSPONQ8IVN8 264 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 C10orf126Q8N4M7 172 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 KIR2DL5BQ8NHK3 375 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 SMR3AQ99954 134 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 TMEM243Q9BU79 118 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 SPANXDQ9BXN6 97 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 WFDC10AQ9H1F0 79 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 SPANXCQ9NY87 97 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 PRO1854Q9UHT4 67 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 NDUFA12Q9UI09 145 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 TRBV20-1A0A075B6N2 111 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 IGHV3-64A0A075B6Q5 118 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 GAGE12JA6NER3 117 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 GAGE4Q13068 117 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 GAGE5Q13069 117 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 GAGE13Q4V321 117 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 COPS9Q8WXC6 57 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 RNF183Q96D59 192 aa8.06□□□□□ -1.12
HNRNPU-221ENST00000639824 HIVEP2P31629 2446 aa8.05□□□□□ -1.12
HNRNPU-221ENST00000639824 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.05□□□□□ -1.12
HNRNPU-221ENST00000639824 TSPAN13O95857 204 aa8.05□□□□□ -1.12
HNRNPU-221ENST00000639824 CFC1BP0CG36 223 aa8.05□□□□□ -1.12
HNRNPU-221ENST00000639824 CFC1P0CG37 223 aa8.05□□□□□ -1.12
HNRNPU-221ENST00000639824 IFITM1P13164 125 aa8.05□□□□□ -1.12
HNRNPU-221ENST00000639824 KRTAP10-3P60369 221 aa8.05□□□□□ -1.12
HNRNPU-221ENST00000639824 CIRBPQ14011 172 aaKnown RBP8.05□□□□□ -1.12
HNRNPU-221ENST00000639824 RNASE13Q5GAN3 156 aaKnown RBP8.05□□□□□ -1.12
HNRNPU-221ENST00000639824 J3QR89 54 aa8.04□□□□□ -1.12
HNRNPU-221ENST00000639824 HELZ2Q9BYK8 2649 aaKnown RBP8.03□□□□□ -1.12
HNRNPU-221ENST00000639824 TRAV8-3A0A0A6YYJ7 113 aa8.03□□□□□ -1.12
HNRNPU-221ENST00000639824 A4D1N5 150 aa8.03□□□□□ -1.12
HNRNPU-221ENST00000639824 NDUFA1O15239 70 aa8.03□□□□□ -1.12
HNRNPU-221ENST00000639824 SPINK8P0C7L1 97 aa8.03□□□□□ -1.12
HNRNPU-221ENST00000639824 NTM-AS1Q6ZSK4 140 aa8.03□□□□□ -1.12
HNRNPU-221ENST00000639824 MUSTN1Q8IVN3 82 aa8.03□□□□□ -1.12
HNRNPU-221ENST00000639824 LINC00612Q8N6U2 182 aa8.03□□□□□ -1.12
HNRNPU-221ENST00000639824 VPS25Q9BRG1 176 aa8.03□□□□□ -1.12
HNRNPU-221ENST00000639824 CDC42SE2Q9NRR3 84 aa8.03□□□□□ -1.12
HNRNPU-221ENST00000639824 CDKN2A-AS1Q9UH64 79 aa8.03□□□□□ -1.12
HNRNPU-221ENST00000639824 LOC107984156A0A0G2JMH3 177 aa8.02□□□□□ -1.13
HNRNPU-221ENST00000639824 IGLV5-39A0A0G2JS06 123 aa8.02□□□□□ -1.13
HNRNPU-221ENST00000639824 KRTAP9-6A0A140TA67 174 aa8.02□□□□□ -1.13
HNRNPU-221ENST00000639824 INAFM1C9JVW0 142 aa8.02□□□□□ -1.13
HNRNPU-221ENST00000639824 H3BMG7 143 aa8.02□□□□□ -1.13
HNRNPU-221ENST00000639824 MIAQ16674 131 aa8.02□□□□□ -1.13
HNRNPU-221ENST00000639824 RNF151Q2KHN1 245 aa8.02□□□□□ -1.13
HNRNPU-221ENST00000639824 LINC00242Q5T6M2 205 aa8.02□□□□□ -1.13
HNRNPU-221ENST00000639824 ARL17AQ8IVW1 177 aa8.02□□□□□ -1.13
HNRNPU-221ENST00000639824 ERG28Q9UKR5 140 aa8.02□□□□□ -1.13
HNRNPU-221ENST00000639824 G3V4G9 280 aa8.01□□□□□ -1.13
HNRNPU-221ENST00000639824 APOC4P55056 127 aa8.01□□□□□ -1.13
HNRNPU-221ENST00000639824 FHL2Q14192 279 aa8.01□□□□□ -1.13
HNRNPU-221ENST00000639824 ACANP16112 2415 aa8.01□□□□□ -1.13
HNRNPU-221ENST00000639824 ITPR2Q14571 2701 aa8.01□□□□□ -1.13
HNRNPU-221ENST00000639824 LYRM9A8MSI8 78 aa8□□□□□ -1.13
HNRNPU-221ENST00000639824 CRLF1O75462 422 aa8□□□□□ -1.13
HNRNPU-221ENST00000639824 LINC00694P0DN24 101 aa8□□□□□ -1.13
HNRNPU-221ENST00000639824 HERV-K104P63124 156 aa8□□□□□ -1.13
HNRNPU-221ENST00000639824 LITAFQ99732 161 aa8□□□□□ -1.13
HNRNPU-221ENST00000639824 ZNF469Q96JG9 3925 aaPredicted RBP8□□□□□ -1.13
HNRNPU-221ENST00000639824 AKAP9Q99996 3911 aa8□□□□□ -1.13
HNRNPU-221ENST00000639824 TRBV6-8A0A0A6YYG3 113 aa8□□□□□ -1.13
HNRNPU-221ENST00000639824 IGHV3-33P01772 117 aa8□□□□□ -1.13
HNRNPU-221ENST00000639824 SCGB1C2P0DMR2 95 aa8□□□□□ -1.13
HNRNPU-221ENST00000639824 PPDPFQ9H3Y8 114 aa8□□□□□ -1.13
HNRNPU-221ENST00000639824 TRAV13-1A0A0B4J241 112 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms