RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 ETDCA0A1B0GVM5 59 aa11.93□□□□□ -0.5
GABRB3-215ENST00000622697 CRYGDP07320 174 aa11.93□□□□□ -0.5
GABRB3-215ENST00000622697 SMIM20Q8N5G0 67 aa11.93□□□□□ -0.5
GABRB3-215ENST00000622697 HIGD2BQ4VC39 106 aa11.92□□□□□ -0.5
GABRB3-215ENST00000622697 IGLV1-40P01703 118 aa11.92□□□□□ -0.5
GABRB3-215ENST00000622697 ZMAT4Q9H898 229 aa11.92□□□□□ -0.5
GABRB3-215ENST00000622697 TLN2Q9Y4G6 2542 aa11.92□□□□□ -0.5
GABRB3-215ENST00000622697 POLR2KP53803 58 aaKnown RBP11.92□□□□□ -0.5
GABRB3-215ENST00000622697 LINC00308Q8TCZ7 52 aa11.92□□□□□ -0.5
GABRB3-215ENST00000622697 SLPIP03973 132 aa11.91□□□□□ -0.5
GABRB3-215ENST00000622697 SPANXDQ9BXN6 97 aa11.91□□□□□ -0.5
GABRB3-215ENST00000622697 CNFNQ9BYD5 112 aa11.91□□□□□ -0.5
GABRB3-215ENST00000622697 PRRC2CQ9Y520 2896 aaKnown RBP11.9□□□□□ -0.5
GABRB3-215ENST00000622697 LOC100131303A0A0U1RQF7 123 aa11.9□□□□□ -0.5
GABRB3-215ENST00000622697 TRBV6-5A0A0K0K1A5 114 aa11.9□□□□□ -0.5
GABRB3-215ENST00000622697 RNF183Q96D59 192 aa11.9□□□□□ -0.5
GABRB3-215ENST00000622697 SPANXCQ9NY87 97 aa11.9□□□□□ -0.5
GABRB3-215ENST00000622697 REG3AQ06141 175 aa11.89□□□□□ -0.51
GABRB3-215ENST00000622697 PSMG3-AS1Q96PY0 264 aa11.89□□□□□ -0.51
GABRB3-215ENST00000622697 INSL3P51460 131 aa11.88□□□□□ -0.51
GABRB3-215ENST00000622697 C9orf85Q96MD7 179 aa11.88□□□□□ -0.51
GABRB3-215ENST00000622697 RAI1Q7Z5J4 1906 aaPredicted RBP11.88□□□□□ -0.51
GABRB3-215ENST00000622697 SETD2Q9BYW2 2564 aaPredicted RBP11.88□□□□□ -0.51
GABRB3-215ENST00000622697 CCL18P55774 89 aa11.88□□□□□ -0.51
GABRB3-215ENST00000622697 MRGPRG-AS1Q2M3A8 158 aa11.88□□□□□ -0.51
GABRB3-215ENST00000622697 CXCL5P42830 114 aa11.88□□□□□ -0.51
GABRB3-215ENST00000622697 LRRC75A-AS1Q8N1F1 130 aa11.87□□□□□ -0.51
GABRB3-215ENST00000622697 CHCHD10Q8WYQ3 142 aaPredicted RBP11.87□□□□□ -0.51
GABRB3-215ENST00000622697 RBM3P98179 157 aaKnown RBP11.87□□□□□ -0.51
GABRB3-215ENST00000622697 A0A096LNJ9 63 aa11.86□□□□□ -0.51
GABRB3-215ENST00000622697 USP9XQ93008 2570 aaPredicted RBP11.86□□□□□ -0.51
GABRB3-215ENST00000622697 DIRC1Q969H9 104 aa11.86□□□□□ -0.51
GABRB3-215ENST00000622697 ZNF843Q8N446 348 aa11.86□□□□□ -0.51
GABRB3-215ENST00000622697 TRBV6-8A0A0A6YYG3 113 aa11.86□□□□□ -0.51
GABRB3-215ENST00000622697 JMJD7-PLA2G4BH0Y9G9 81 aa11.86□□□□□ -0.51
GABRB3-215ENST00000622697 PRB2P02812 416 aaPredicted RBP11.85□□□□□ -0.51
GABRB3-215ENST00000622697 ATOX1O00244 68 aa11.85□□□□□ -0.51
GABRB3-215ENST00000622697 UBE2D4Q9Y2X8 147 aa11.85□□□□□ -0.51
GABRB3-215ENST00000622697 INAFM1C9JVW0 142 aa11.85□□□□□ -0.51
GABRB3-215ENST00000622697 FUSP35637 526 aaKnown RBP eCLIP11.85□□□□□ -0.51
GABRB3-215ENST00000622697 TET2Q6N021 2002 aaPredicted RBP11.85□□□□□ -0.51
GABRB3-215ENST00000622697 PYGO1Q9Y3Y4 419 aa11.85□□□□□ -0.51
GABRB3-215ENST00000622697 TIRAPP58753 221 aa11.85□□□□□ -0.51
GABRB3-215ENST00000622697 TMEM256-PLSCR3K7ERE1 68 aa11.84□□□□□ -0.51
GABRB3-215ENST00000622697 IGIPA6NJ69 53 aa11.84□□□□□ -0.51
GABRB3-215ENST00000622697 NREPQ16612 68 aa11.84□□□□□ -0.51
GABRB3-215ENST00000622697 BBC3Q96PG8 261 aaPredicted RBP11.83□□□□□ -0.51
GABRB3-215ENST00000622697 SDIM1Q6ZPB5 146 aa11.83□□□□□ -0.52
GABRB3-215ENST00000622697 FAM110AQ9BQ89 295 aa11.83□□□□□ -0.52
GABRB3-215ENST00000622697 TRBV30A0A0K0K1B3 111 aa11.83□□□□□ -0.52
GABRB3-215ENST00000622697 LINC00526Q96FQ7 95 aa11.83□□□□□ -0.52
GABRB3-215ENST00000622697 NDUFA7O95182 113 aa11.83□□□□□ -0.52
GABRB3-215ENST00000622697 NDUFV3P56181 108 aaKnown RBP11.82□□□□□ -0.52
GABRB3-215ENST00000622697 LINC01006Q8NI28 216 aa11.82□□□□□ -0.52
GABRB3-215ENST00000622697 LINC00643Q86TS7 51 aa11.81□□□□□ -0.52
GABRB3-215ENST00000622697 POM121L12Q8N7R1 296 aa11.81□□□□□ -0.52
GABRB3-215ENST00000622697 XAGE1AQ9HD64 81 aa11.81□□□□□ -0.52
GABRB3-215ENST00000622697 USP9YO00507 2555 aaPredicted RBP11.81□□□□□ -0.52
GABRB3-215ENST00000622697 KRTAP10-9P60411 292 aa11.81□□□□□ -0.52
GABRB3-215ENST00000622697 CITED1Q99966 193 aa11.81□□□□□ -0.52
GABRB3-215ENST00000622697 CHD8Q9HCK8 2581 aa11.81□□□□□ -0.52
GABRB3-215ENST00000622697 TRBV6-4A0A1B0GX49 114 aa11.8□□□□□ -0.52
GABRB3-215ENST00000622697 CRIP2P52943 208 aaPredicted RBP11.8□□□□□ -0.52
GABRB3-215ENST00000622697 TRAV23DV6A0A075B6W5 121 aa11.8□□□□□ -0.52
GABRB3-215ENST00000622697 ADAMTS20P59510 1910 aa11.79□□□□□ -0.52
GABRB3-215ENST00000622697 NDUFS5O43920 106 aa11.79□□□□□ -0.52
GABRB3-215ENST00000622697 ABCA12Q86UK0 2595 aa11.79□□□□□ -0.52
GABRB3-215ENST00000622697 COX7BP24311 80 aa11.79□□□□□ -0.52
GABRB3-215ENST00000622697 UBE2D1P51668 147 aa11.78□□□□□ -0.52
GABRB3-215ENST00000622697 TSPEAR-AS2P59090 65 aa11.78□□□□□ -0.52
GABRB3-215ENST00000622697 ZNF580Q9UK33 172 aa11.78□□□□□ -0.52
GABRB3-215ENST00000622697 IGLV4-69A0A075B6H9 119 aa11.78□□□□□ -0.52
GABRB3-215ENST00000622697 IBA57-AS1B1ANH7 110 aa11.78□□□□□ -0.52
GABRB3-215ENST00000622697 CHD7Q9P2D1 2997 aa11.77□□□□□ -0.53
GABRB3-215ENST00000622697 LYRM9A8MSI8 78 aa11.77□□□□□ -0.53
GABRB3-215ENST00000622697 H7C423 109 aa11.76□□□□□ -0.53
GABRB3-215ENST00000622697 C11orf45Q8TAV5 145 aa11.76□□□□□ -0.53
GABRB3-215ENST00000622697 SPTBN4Q9H254 2564 aa11.76□□□□□ -0.53
GABRB3-215ENST00000622697 UFSP1Q6NVU6 142 aa11.76□□□□□ -0.53
GABRB3-215ENST00000622697 IGKV2-24A0A0C4DH68 120 aa11.75□□□□□ -0.53
GABRB3-215ENST00000622697 MRPS36P82909 103 aaKnown RBP11.75□□□□□ -0.53
GABRB3-215ENST00000622697 JMJD1CQ15652 2540 aa11.75□□□□□ -0.53
GABRB3-215ENST00000622697 SCXQ7RTU7 201 aa11.75□□□□□ -0.53
GABRB3-215ENST00000622697 SMIM9A6NGZ8 99 aa11.75□□□□□ -0.53
GABRB3-215ENST00000622697 C6orf99Q4VX62 202 aa11.75□□□□□ -0.53
GABRB3-215ENST00000622697 ODF3L2Q3SX64 289 aa11.75□□□□□ -0.53
GABRB3-215ENST00000622697 XGP55808 180 aa11.74□□□□□ -0.53
GABRB3-215ENST00000622697 IGLV2-18A0A075B6J9 118 aa11.74□□□□□ -0.53
GABRB3-215ENST00000622697 COX8CQ7Z4L0 72 aa11.74□□□□□ -0.53
GABRB3-215ENST00000622697 BPTFQ12830 3046 aa11.73□□□□□ -0.53
GABRB3-215ENST00000622697 UPK3BQ9BT76 320 aa11.73□□□□□ -0.53
GABRB3-215ENST00000622697 LST1O00453 97 aa11.72□□□□□ -0.53
GABRB3-215ENST00000622697 LINC00959A0A1B0GUT2 108 aa11.72□□□□□ -0.53
GABRB3-215ENST00000622697 SMR3AQ99954 134 aa11.72□□□□□ -0.53
GABRB3-215ENST00000622697 LY6G6DO95868 133 aa11.71□□□□□ -0.53
GABRB3-215ENST00000622697 COX6A2Q02221 97 aa11.71□□□□□ -0.53
GABRB3-215ENST00000622697 LINC00242Q5T6M2 205 aa11.71□□□□□ -0.53
GABRB3-215ENST00000622697 CDC42SE2Q9NRR3 84 aa11.71□□□□□ -0.53
GABRB3-215ENST00000622697 TIMM17BO60830 172 aa11.71□□□□□ -0.54
GABRB3-215ENST00000622697 SMIM11BQ8TCY0 68 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms