RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 LINC00482Q8N8I6 264 aa17.02■□□□□ 0.32
HOXA4-204ENST00000610970 WFDC10AQ9H1F0 79 aa17.01■□□□□ 0.31
HOXA4-204ENST00000610970 GTSF1LQ9H1H1 148 aa17.01■□□□□ 0.31
HOXA4-204ENST00000610970 GEMIN7Q9H840 131 aaKnown RBP17.01■□□□□ 0.31
HOXA4-204ENST00000610970 PGPEP1Q9NXJ5 209 aa17.01■□□□□ 0.31
HOXA4-204ENST00000610970 F8W1H4 67 aa17■□□□□ 0.31
HOXA4-204ENST00000610970 KRTAP10-3P60369 221 aa17■□□□□ 0.31
HOXA4-204ENST00000610970 IGLV5-45A0A087WSX0 123 aa16.99■□□□□ 0.31
HOXA4-204ENST00000610970 TRBV6-4A0A1B0GX49 114 aa16.99■□□□□ 0.31
HOXA4-204ENST00000610970 INSL3P51460 131 aa16.99■□□□□ 0.31
HOXA4-204ENST00000610970 LYRM7Q5U5X0 104 aa16.99■□□□□ 0.31
HOXA4-204ENST00000610970 FAM19A3Q7Z5A8 133 aa16.99■□□□□ 0.31
HOXA4-204ENST00000610970 VSIG2Q96IQ7 327 aa16.99■□□□□ 0.31
HOXA4-204ENST00000610970 RPL24P83731 157 aaKnown RBP16.99■□□□□ 0.31
HOXA4-204ENST00000610970 CUBNO60494 3623 aa16.98■□□□□ 0.31
HOXA4-204ENST00000610970 IGHV3-64A0A075B6Q5 118 aa16.98■□□□□ 0.31
HOXA4-204ENST00000610970 TRGV2A0A075B6R0 118 aa16.98■□□□□ 0.31
HOXA4-204ENST00000610970 A0A0J9YXY3 114 aa16.98■□□□□ 0.31
HOXA4-204ENST00000610970 RNASE13Q5GAN3 156 aaKnown RBP16.98■□□□□ 0.31
HOXA4-204ENST00000610970 WNK1Q9H4A3 2382 aa16.97■□□□□ 0.31
HOXA4-204ENST00000610970 SBSPONQ8IVN8 264 aa16.97■□□□□ 0.31
HOXA4-204ENST00000610970 H7C423 109 aa16.96■□□□□ 0.31
HOXA4-204ENST00000610970 C10orf126Q8N4M7 172 aa16.96■□□□□ 0.31
HOXA4-204ENST00000610970 SETD2Q9BYW2 2564 aaPredicted RBP16.96■□□□□ 0.3
HOXA4-204ENST00000610970 GAGE7O76087 117 aa16.96■□□□□ 0.3
HOXA4-204ENST00000610970 CFC1BP0CG36 223 aa16.96■□□□□ 0.3
HOXA4-204ENST00000610970 CFC1P0CG37 223 aa16.96■□□□□ 0.3
HOXA4-204ENST00000610970 GAGE12FP0CL80 117 aa16.96■□□□□ 0.3
HOXA4-204ENST00000610970 GAGE12GP0CL81 117 aa16.96■□□□□ 0.3
HOXA4-204ENST00000610970 GAGE12IP0CL82 117 aa16.96■□□□□ 0.3
HOXA4-204ENST00000610970 HERVK_113P63121 156 aa16.96■□□□□ 0.3
HOXA4-204ENST00000610970 FN1P02751 2386 aaKnown RBP16.96■□□□□ 0.3
HOXA4-204ENST00000610970 APOMO95445 188 aa16.95■□□□□ 0.3
HOXA4-204ENST00000610970 GAGE12JA6NER3 117 aa16.94■□□□□ 0.3
HOXA4-204ENST00000610970 TSPAN13O95857 204 aa16.94■□□□□ 0.3
HOXA4-204ENST00000610970 GAGE4Q13068 117 aa16.94■□□□□ 0.3
HOXA4-204ENST00000610970 GAGE5Q13069 117 aa16.94■□□□□ 0.3
HOXA4-204ENST00000610970 GAGE13Q4V321 117 aa16.94■□□□□ 0.3
HOXA4-204ENST00000610970 NTM-AS1Q6ZSK4 140 aa16.94■□□□□ 0.3
HOXA4-204ENST00000610970 NDUFA12Q9UI09 145 aa16.94■□□□□ 0.3
HOXA4-204ENST00000610970 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.93■□□□□ 0.3
HOXA4-204ENST00000610970 PRO1854Q9UHT4 67 aa16.93■□□□□ 0.3
HOXA4-204ENST00000610970 TRAV8-3A0A0A6YYJ7 113 aa16.93■□□□□ 0.3
HOXA4-204ENST00000610970 INAFM1C9JVW0 142 aa16.93■□□□□ 0.3
HOXA4-204ENST00000610970 ZFAND6Q6FIF0 208 aa16.93■□□□□ 0.3
HOXA4-204ENST00000610970 NF1P21359 2839 aa16.92■□□□□ 0.3
HOXA4-204ENST00000610970 A0A0B4J2C4 111 aa16.92■□□□□ 0.3
HOXA4-204ENST00000610970 C9orf66Q5T8R8 295 aa16.92■□□□□ 0.3
HOXA4-204ENST00000610970 TMEM243Q9BU79 118 aa16.92■□□□□ 0.3
HOXA4-204ENST00000610970 SPANXDQ9BXN6 97 aa16.92■□□□□ 0.3
HOXA4-204ENST00000610970 SPANXCQ9NY87 97 aa16.92■□□□□ 0.3
HOXA4-204ENST00000610970 TRGV4A0A0C4DH28 118 aa16.91■□□□□ 0.3
HOXA4-204ENST00000610970 TIMM17BO60830 172 aa16.91■□□□□ 0.3
HOXA4-204ENST00000610970 KIR2DL5BQ8NHK3 375 aa16.91■□□□□ 0.3
HOXA4-204ENST00000610970 SPINK8P0C7L1 97 aa16.9■□□□□ 0.3
HOXA4-204ENST00000610970 MUSTN1Q8IVN3 82 aa16.9■□□□□ 0.3
HOXA4-204ENST00000610970 A4D1N5 150 aa16.9■□□□□ 0.3
HOXA4-204ENST00000610970 SMIM9A6NGZ8 99 aa16.9■□□□□ 0.3
HOXA4-204ENST00000610970 H3BMG7 143 aa16.9■□□□□ 0.3
HOXA4-204ENST00000610970 RNF151Q2KHN1 245 aa16.9■□□□□ 0.3
HOXA4-204ENST00000610970 TMEM101Q96IK0 257 aa16.9■□□□□ 0.3
HOXA4-204ENST00000610970 CDKN2A-AS1Q9UH64 79 aa16.9■□□□□ 0.3
HOXA4-204ENST00000610970 NIPBLQ6KC79 2804 aaeCLIP16.9■□□□□ 0.3
HOXA4-204ENST00000610970 LINC00694P0DN24 101 aa16.89■□□□□ 0.29
HOXA4-204ENST00000610970 LITAFQ99732 161 aa16.89■□□□□ 0.29
HOXA4-204ENST00000610970 CDC42SE2Q9NRR3 84 aa16.89■□□□□ 0.29
HOXA4-204ENST00000610970 C2CD3Q4AC94 2353 aa16.89■□□□□ 0.29
HOXA4-204ENST00000610970 G3V4G9 280 aa16.88■□□□□ 0.29
HOXA4-204ENST00000610970 UBE2L6O14933 153 aa16.88■□□□□ 0.29
HOXA4-204ENST00000610970 LINC00242Q5T6M2 205 aa16.88■□□□□ 0.29
HOXA4-204ENST00000610970 TRBV20-1A0A075B6N2 111 aa16.87■□□□□ 0.29
HOXA4-204ENST00000610970 FHL2Q14192 279 aa16.87■□□□□ 0.29
HOXA4-204ENST00000610970 LINC00612Q8N6U2 182 aa16.87■□□□□ 0.29
HOXA4-204ENST00000610970 RNF183Q96D59 192 aa16.87■□□□□ 0.29
HOXA4-204ENST00000610970 NDUFA1O15239 70 aa16.87■□□□□ 0.29
HOXA4-204ENST00000610970 IGLV5-39A0A0G2JS06 123 aa16.86■□□□□ 0.29
HOXA4-204ENST00000610970 LOC107984156A0A0G2JMH3 177 aa16.85■□□□□ 0.29
HOXA4-204ENST00000610970 ARL17AQ8IVW1 177 aa16.85■□□□□ 0.29
HOXA4-204ENST00000610970 VPS25Q9BRG1 176 aa16.85■□□□□ 0.29
HOXA4-204ENST00000610970 MIAQ16674 131 aa16.84■□□□□ 0.29
HOXA4-204ENST00000610970 PRO0461Q9UI25 63 aa16.84■□□□□ 0.29
HOXA4-204ENST00000610970 IFITM1P13164 125 aa16.84■□□□□ 0.29
HOXA4-204ENST00000610970 IGHV3-33P01772 117 aa16.83■□□□□ 0.28
HOXA4-204ENST00000610970 COX6A2Q02221 97 aa16.83■□□□□ 0.28
HOXA4-204ENST00000610970 CRLF1O75462 422 aa16.82■□□□□ 0.28
HOXA4-204ENST00000610970 WFDC2Q14508 124 aa16.82■□□□□ 0.28
HOXA4-204ENST00000610970 ERG28Q9UKR5 140 aa16.82■□□□□ 0.28
HOXA4-204ENST00000610970 CIRBPQ14011 172 aaKnown RBP16.82■□□□□ 0.28
HOXA4-204ENST00000610970 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.82■□□□□ 0.28
HOXA4-204ENST00000610970 PSMB2P49721 201 aa16.8■□□□□ 0.28
HOXA4-204ENST00000610970 LOC100131303A0A0U1RQF7 123 aa16.79■□□□□ 0.28
HOXA4-204ENST00000610970 TRBV6-8A0A0A6YYG3 113 aa16.79■□□□□ 0.28
HOXA4-204ENST00000610970 TRAV13-1A0A0B4J241 112 aa16.79■□□□□ 0.28
HOXA4-204ENST00000610970 J3QR89 54 aa16.79■□□□□ 0.28
HOXA4-204ENST00000610970 PRSS2P07478 247 aa16.79■□□□□ 0.28
HOXA4-204ENST00000610970 X6R8D5 127 aa16.79■□□□□ 0.28
HOXA4-204ENST00000610970 A8MZ25 164 aa16.78■□□□□ 0.28
HOXA4-204ENST00000610970 SMIM1B2RUZ4 78 aa16.78■□□□□ 0.28
HOXA4-204ENST00000610970 ADAMTSL4-AS1Q5T5F5 129 aa16.78■□□□□ 0.28
HOXA4-204ENST00000610970 TEX48A0A1B0GUV7 120 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms