RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 HECTD1Q9ULT8 2610 aa7.9□□□□□ -1.15
SKA2-204ENST00000578519 WNK1Q9H4A3 2382 aa7.89□□□□□ -1.15
SKA2-204ENST00000578519 A0A0J9YXV3 536 aa7.89□□□□□ -1.15
SKA2-204ENST00000578519 J3QQQ9 107 aa7.89□□□□□ -1.15
SKA2-204ENST00000578519 SMIM13P0DJ93 91 aa7.89□□□□□ -1.15
SKA2-204ENST00000578519 ATP6V0E2Q8NHE4 81 aa7.89□□□□□ -1.15
SKA2-204ENST00000578519 OPRPNQ99935 248 aaPredicted RBP7.89□□□□□ -1.15
SKA2-204ENST00000578519 GCN1Q92616 2671 aaKnown RBP7.89□□□□□ -1.15
SKA2-204ENST00000578519 IGHV4-28A0A0C4DH34 117 aa7.88□□□□□ -1.15
SKA2-204ENST00000578519 PAX4O43316 350 aa7.88□□□□□ -1.15
SKA2-204ENST00000578519 ATP5G1P05496 136 aa7.88□□□□□ -1.15
SKA2-204ENST00000578519 ZNF22P17026 224 aaPredicted RBP7.88□□□□□ -1.15
SKA2-204ENST00000578519 GCSHP23434 173 aa7.88□□□□□ -1.15
SKA2-204ENST00000578519 EGFEM1PQ0D2K5 195 aa7.88□□□□□ -1.15
SKA2-204ENST00000578519 SRSF9Q13242 221 aaKnown RBP eCLIP7.88□□□□□ -1.15
SKA2-204ENST00000578519 CEND1Q8N111 149 aa7.88□□□□□ -1.15
SKA2-204ENST00000578519 TM2D2Q9BX73 214 aa7.88□□□□□ -1.15
SKA2-204ENST00000578519 COX11Q9Y6N1 276 aa7.88□□□□□ -1.15
SKA2-204ENST00000578519 NOTCH2Q04721 2471 aa7.88□□□□□ -1.15
SKA2-204ENST00000578519 ANK3Q12955 4377 aaKnown RBP7.87□□□□□ -1.15
SKA2-204ENST00000578519 ZNF469Q96JG9 3925 aaPredicted RBP7.87□□□□□ -1.15
SKA2-204ENST00000578519 MTORP42345 2549 aa7.87□□□□□ -1.15
SKA2-204ENST00000578519 FN1P02751 2386 aaKnown RBP7.87□□□□□ -1.15
SKA2-204ENST00000578519 TRBV6-8A0A0A6YYG3 113 aa7.87□□□□□ -1.15
SKA2-204ENST00000578519 GYPEP15421 78 aa7.87□□□□□ -1.15
SKA2-204ENST00000578519 UBE2D1P51668 147 aa7.87□□□□□ -1.15
SKA2-204ENST00000578519 Q6ZUT4 128 aa7.87□□□□□ -1.15
SKA2-204ENST00000578519 FAM19A3Q7Z5A8 133 aa7.87□□□□□ -1.15
SKA2-204ENST00000578519 SBSPONQ8IVN8 264 aa7.87□□□□□ -1.15
SKA2-204ENST00000578519 MAPKAPK5-AS1Q8N8E1 139 aa7.87□□□□□ -1.15
SKA2-204ENST00000578519 Q9UF83 564 aa7.87□□□□□ -1.15
SKA2-204ENST00000578519 IGHV1-58A0A0C4DH39 117 aa7.86□□□□□ -1.15
SKA2-204ENST00000578519 NTM-AS1Q6ZSK4 140 aa7.86□□□□□ -1.15
SKA2-204ENST00000578519 SPATA3Q8NHX4 192 aa7.86□□□□□ -1.15
SKA2-204ENST00000578519 CHCHD5Q9BSY4 110 aa7.86□□□□□ -1.15
SKA2-204ENST00000578519 TRAV26-1A0A087WT03 109 aa7.85□□□□□ -1.15
SKA2-204ENST00000578519 CCL25O15444 150 aa7.85□□□□□ -1.15
SKA2-204ENST00000578519 OXLD1Q5BKU9 147 aa7.85□□□□□ -1.15
SKA2-204ENST00000578519 CEMP1Q6PRD7 247 aaPredicted RBP7.85□□□□□ -1.15
SKA2-204ENST00000578519 KRTAP9-9Q9BYP9 154 aa7.85□□□□□ -1.15
SKA2-204ENST00000578519 KRTAP9-4Q9BYQ2 154 aa7.85□□□□□ -1.15
SKA2-204ENST00000578519 CDC42SE2Q9NRR3 84 aa7.85□□□□□ -1.15
SKA2-204ENST00000578519 SPANXB1Q9NS25 103 aaPredicted RBP7.85□□□□□ -1.15
SKA2-204ENST00000578519 AKAP9Q99996 3911 aa7.84□□□□□ -1.15
SKA2-204ENST00000578519 KRTAP4-8A0A0G2JLE6 195 aa7.84□□□□□ -1.15
SKA2-204ENST00000578519 TMEM238C9JI98 176 aa7.84□□□□□ -1.15
SKA2-204ENST00000578519 TAX1BP3O14907 124 aa7.84□□□□□ -1.15
SKA2-204ENST00000578519 LINC00694P0DN24 101 aa7.84□□□□□ -1.15
SKA2-204ENST00000578519 VAMP3Q15836 100 aa7.84□□□□□ -1.15
SKA2-204ENST00000578519 MRPL23Q16540 153 aaKnown RBP7.84□□□□□ -1.15
SKA2-204ENST00000578519 Q8NAQ8 132 aa7.84□□□□□ -1.15
SKA2-204ENST00000578519 TTTY13Q9BZ97 58 aa7.84□□□□□ -1.15
SKA2-204ENST00000578519 TP73-AS1Q9UF72 201 aa7.84□□□□□ -1.15
SKA2-204ENST00000578519 IGLV5-45A0A087WSX0 123 aa7.83□□□□□ -1.16
SKA2-204ENST00000578519 LOC100131303A0A0U1RQF7 123 aa7.83□□□□□ -1.16
SKA2-204ENST00000578519 C9orf118A6NHY6 69 aa7.83□□□□□ -1.16
SKA2-204ENST00000578519 IGHV3-30-3P0DP02 117 aa7.83□□□□□ -1.16
SKA2-204ENST00000578519 CIRBPQ14011 172 aaKnown RBP7.83□□□□□ -1.16
SKA2-204ENST00000578519 Q6ZVH6 145 aa7.83□□□□□ -1.16
SKA2-204ENST00000578519 GTF2H5Q6ZYL4 71 aa7.83□□□□□ -1.16
SKA2-204ENST00000578519 COPS9Q8WXC6 57 aa7.83□□□□□ -1.16
SKA2-204ENST00000578519 VSIG2Q96IQ7 327 aa7.83□□□□□ -1.16
SKA2-204ENST00000578519 C2CD3Q4AC94 2353 aa7.83□□□□□ -1.16
SKA2-204ENST00000578519 NACAE9PAV3 2078 aa7.82□□□□□ -1.16
SKA2-204ENST00000578519 A0A1B0GUV1 79 aa7.82□□□□□ -1.16
SKA2-204ENST00000578519 F5H768 121 aa7.82□□□□□ -1.16
SKA2-204ENST00000578519 GAGE6Q13070 117 aa7.82□□□□□ -1.16
SKA2-204ENST00000578519 RNASE13Q5GAN3 156 aaKnown RBP7.82□□□□□ -1.16
SKA2-204ENST00000578519 KRTAP4-12Q9BQ66 201 aa7.82□□□□□ -1.16
SKA2-204ENST00000578519 ICOSQ9Y6W8 199 aa7.82□□□□□ -1.16
SKA2-204ENST00000578519 TRAV13-1A0A0B4J241 112 aa7.81□□□□□ -1.16
SKA2-204ENST00000578519 A0A0J9YY99 117 aa7.81□□□□□ -1.16
SKA2-204ENST00000578519 TMEM262E9PQX1 116 aa7.81□□□□□ -1.16
SKA2-204ENST00000578519 PRIMA1Q86XR5 153 aa7.81□□□□□ -1.16
SKA2-204ENST00000578519 FAM104AQ969W3 186 aa7.81□□□□□ -1.16
SKA2-204ENST00000578519 TIMM17BO60830 172 aa7.8□□□□□ -1.16
SKA2-204ENST00000578519 KRTAP10-11P60412 298 aa7.8□□□□□ -1.16
SKA2-204ENST00000578519 RPL24P83731 157 aaKnown RBP7.8□□□□□ -1.16
SKA2-204ENST00000578519 UBE2V1Q13404 147 aa7.8□□□□□ -1.16
SKA2-204ENST00000578519 SS18Q15532 418 aa7.8□□□□□ -1.16
SKA2-204ENST00000578519 LINC00242Q5T6M2 205 aa7.8□□□□□ -1.16
SKA2-204ENST00000578519 C11orf68Q9H3H3 251 aaKnown RBP7.8□□□□□ -1.16
SKA2-204ENST00000578519 NHP2Q9NX24 153 aaKnown RBP7.8□□□□□ -1.16
SKA2-204ENST00000578519 NDUFA12Q9UI09 145 aa7.8□□□□□ -1.16
SKA2-204ENST00000578519 IGHV3-64A0A075B6Q5 118 aa7.79□□□□□ -1.16
SKA2-204ENST00000578519 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.79□□□□□ -1.16
SKA2-204ENST00000578519 H3BNG1 76 aa7.79□□□□□ -1.16
SKA2-204ENST00000578519 DEFB4AO15263 64 aa7.79□□□□□ -1.16
SKA2-204ENST00000578519 SPINK8P0C7L1 97 aa7.79□□□□□ -1.16
SKA2-204ENST00000578519 FABP2P12104 132 aa7.79□□□□□ -1.16
SKA2-204ENST00000578519 FXYD2P54710 66 aa7.79□□□□□ -1.16
SKA2-204ENST00000578519 HERV-K104P63124 156 aa7.79□□□□□ -1.16
SKA2-204ENST00000578519 C12orf74Q32Q52 190 aa7.79□□□□□ -1.16
SKA2-204ENST00000578519 LYRM7Q5U5X0 104 aa7.79□□□□□ -1.16
SKA2-204ENST00000578519 ZFAND6Q6FIF0 208 aa7.79□□□□□ -1.16
SKA2-204ENST00000578519 SFTA2Q6UW10 78 aa7.79□□□□□ -1.16
SKA2-204ENST00000578519 CDKN2A-AS1Q9UH64 79 aa7.79□□□□□ -1.16
SKA2-204ENST00000578519 GAGE10A6NGK3 116 aa7.78□□□□□ -1.16
SKA2-204ENST00000578519 IFITM1P13164 125 aa7.78□□□□□ -1.16
SKA2-204ENST00000578519 SAMD5Q5TGI4 173 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms