RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 DEFB132Q7Z7B7 95 aa2.79□□□□□ -1.96
TOPBP1-210ENST00000572787 MUSTN1Q8IVN3 82 aa2.79□□□□□ -1.96
TOPBP1-210ENST00000572787 ANAPC11Q9NYG5 84 aa2.79□□□□□ -1.96
TOPBP1-210ENST00000572787 UBE2D4Q9Y2X8 147 aa2.79□□□□□ -1.96
TOPBP1-210ENST00000572787 HILPDAQ9Y5L2 63 aa2.79□□□□□ -1.96
TOPBP1-210ENST00000572787 NINQ8N4C6 2090 aa2.79□□□□□ -1.96
TOPBP1-210ENST00000572787 XRN1Q8IZH2 1706 aaKnown RBP2.79□□□□□ -1.96
TOPBP1-210ENST00000572787 CFAP43Q8NDM7 1665 aa2.79□□□□□ -1.96
TOPBP1-210ENST00000572787 LAMA4Q16363 1823 aa2.78□□□□□ -1.96
TOPBP1-210ENST00000572787 IGKV2-28A0A075B6P5 120 aa2.78□□□□□ -1.96
TOPBP1-210ENST00000572787 A0A1W2PNN7 141 aa2.78□□□□□ -1.96
TOPBP1-210ENST00000572787 F8VRH5 84 aa2.78□□□□□ -1.96
TOPBP1-210ENST00000572787 IGKV2D-28P01615 120 aa2.78□□□□□ -1.96
TOPBP1-210ENST00000572787 CCL18P55774 89 aa2.78□□□□□ -1.96
TOPBP1-210ENST00000572787 PRR15LQ9BU68 103 aa2.78□□□□□ -1.96
TOPBP1-210ENST00000572787 CTTNBP2Q8WZ74 1663 aa2.78□□□□□ -1.96
TOPBP1-210ENST00000572787 MED12LQ86YW9 2145 aa2.78□□□□□ -1.96
TOPBP1-210ENST00000572787 DLG5Q8TDM6 1919 aa2.78□□□□□ -1.97
TOPBP1-210ENST00000572787 RALGAPBQ86X10 1494 aa2.77□□□□□ -1.97
TOPBP1-210ENST00000572787 MED13Q9UHV7 2174 aa2.77□□□□□ -1.97
TOPBP1-210ENST00000572787 MPDZO75970 2070 aa2.77□□□□□ -1.97
TOPBP1-210ENST00000572787 IGKV3D-7A0A0C4DH55 119 aa2.77□□□□□ -1.97
TOPBP1-210ENST00000572787 IGKV3OR2-268A0A0C4DH90 116 aa2.77□□□□□ -1.97
TOPBP1-210ENST00000572787 RNASE3P12724 160 aaKnown RBP2.77□□□□□ -1.97
TOPBP1-210ENST00000572787 MT3P25713 68 aa2.77□□□□□ -1.97
TOPBP1-210ENST00000572787 SPINT3P49223 89 aa2.77□□□□□ -1.97
TOPBP1-210ENST00000572787 ZNF563Q8TA94 476 aa2.77□□□□□ -1.97
TOPBP1-210ENST00000572787 WFDC10AQ9H1F0 79 aa2.77□□□□□ -1.97
TOPBP1-210ENST00000572787 PROK2Q9HC23 129 aa2.77□□□□□ -1.97
TOPBP1-210ENST00000572787 GLI2P10070 1586 aa2.77□□□□□ -1.97
TOPBP1-210ENST00000572787 CLASP1Q7Z460 1538 aa2.77□□□□□ -1.97
TOPBP1-210ENST00000572787 ZGRF1Q86YA3 2104 aa2.77□□□□□ -1.97
TOPBP1-210ENST00000572787 DLEC1Q9Y238 1755 aa2.77□□□□□ -1.97
TOPBP1-210ENST00000572787 ITSN2Q9NZM3 1697 aa2.76□□□□□ -1.97
TOPBP1-210ENST00000572787 LAMC1P11047 1609 aa2.76□□□□□ -1.97
TOPBP1-210ENST00000572787 ADGRB2O60241 1585 aa2.76□□□□□ -1.97
TOPBP1-210ENST00000572787 TRBV6-5A0A0K0K1A5 114 aa2.76□□□□□ -1.97
TOPBP1-210ENST00000572787 H3BRN7 92 aa2.76□□□□□ -1.97
TOPBP1-210ENST00000572787 RPL37AP61513 92 aaKnown RBP2.76□□□□□ -1.97
TOPBP1-210ENST00000572787 TMEM14CQ9P0S9 112 aa2.76□□□□□ -1.97
TOPBP1-210ENST00000572787 LINC01558Q9Y6Z2 57 aa2.76□□□□□ -1.97
TOPBP1-210ENST00000572787 V9GYV3 84 aa2.76□□□□□ -1.97
TOPBP1-210ENST00000572787 MICAL3Q7RTP6 2002 aa2.76□□□□□ -1.97
TOPBP1-210ENST00000572787 PLCH1Q4KWH8 1693 aa2.76□□□□□ -1.97
TOPBP1-210ENST00000572787 CDC42BPGQ6DT37 1551 aa2.75□□□□□ -1.97
TOPBP1-210ENST00000572787 A0A1B0GUL6 1792 aa2.75□□□□□ -1.97
TOPBP1-210ENST00000572787 A0A0D9SFI3 127 aa2.75□□□□□ -1.97
TOPBP1-210ENST00000572787 LRCOL1A6NCL2 159 aa2.75□□□□□ -1.97
TOPBP1-210ENST00000572787 UQCR11O14957 56 aa2.75□□□□□ -1.97
TOPBP1-210ENST00000572787 GNG13Q9P2W3 67 aa2.75□□□□□ -1.97
TOPBP1-210ENST00000572787 CD163L1Q9NR16 1453 aa2.75□□□□□ -1.97
TOPBP1-210ENST00000572787 SCN7AQ01118 1682 aa2.75□□□□□ -1.97
TOPBP1-210ENST00000572787 SIP14410 1827 aa2.75□□□□□ -1.97
TOPBP1-210ENST00000572787 MAST1Q9Y2H9 1570 aa2.74□□□□□ -1.97
TOPBP1-210ENST00000572787 PDCD11Q14690 1871 aaKnown RBP2.74□□□□□ -1.97
TOPBP1-210ENST00000572787 IGKV2-40A0A087WW87 121 aaPredicted RBP2.74□□□□□ -1.97
TOPBP1-210ENST00000572787 H3BVH4 76 aa2.74□□□□□ -1.97
TOPBP1-210ENST00000572787 IGKV2D-40P01614 121 aaPredicted RBP2.74□□□□□ -1.97
TOPBP1-210ENST00000572787 BAGE3Q86Y29 109 aa2.74□□□□□ -1.97
TOPBP1-210ENST00000572787 BAGE2Q86Y30 109 aa2.74□□□□□ -1.97
TOPBP1-210ENST00000572787 CEP170BQ9Y4F5 1589 aaPredicted RBP2.74□□□□□ -1.97
TOPBP1-210ENST00000572787 PREX1Q8TCU6 1659 aa2.73□□□□□ -1.97
TOPBP1-210ENST00000572787 NBDYA0A0U1RRE5 68 aa2.73□□□□□ -1.97
TOPBP1-210ENST00000572787 LINC00315P59091 139 aa2.73□□□□□ -1.97
TOPBP1-210ENST00000572787 KRTAP13-2Q52LG2 175 aa2.73□□□□□ -1.97
TOPBP1-210ENST00000572787 HCP5Q6MZN7 132 aa2.73□□□□□ -1.97
TOPBP1-210ENST00000572787 LINC00322Q6ZN03 302 aaPredicted RBP2.73□□□□□ -1.97
TOPBP1-210ENST00000572787 DOCK11Q5JSL3 2073 aa2.73□□□□□ -1.97
TOPBP1-210ENST00000572787 KIAA0100Q14667 2235 aaKnown RBP2.73□□□□□ -1.97
TOPBP1-210ENST00000572787 COL4A2P08572 1712 aa2.73□□□□□ -1.97
TOPBP1-210ENST00000572787 GBF1Q92538 1859 aa2.73□□□□□ -1.97
TOPBP1-210ENST00000572787 CACNA1DQ01668 2161 aa2.73□□□□□ -1.97
TOPBP1-210ENST00000572787 RREB1Q92766 1687 aa2.73□□□□□ -1.97
TOPBP1-210ENST00000572787 SIPA1L3O60292 1781 aaPredicted RBP2.72□□□□□ -1.97
TOPBP1-210ENST00000572787 SNRPGP15A8MWD9 76 aa2.72□□□□□ -1.97
TOPBP1-210ENST00000572787 M0R135 149 aa2.72□□□□□ -1.97
TOPBP1-210ENST00000572787 INE1O15225 51 aa2.72□□□□□ -1.97
TOPBP1-210ENST00000572787 MGPP08493 103 aa2.72□□□□□ -1.97
TOPBP1-210ENST00000572787 KRTAP1-4P0C5Y4 121 aa2.72□□□□□ -1.97
TOPBP1-210ENST00000572787 CR1P17927 2039 aa2.72□□□□□ -1.97
TOPBP1-210ENST00000572787 FXYD3Q14802 87 aa2.72□□□□□ -1.97
TOPBP1-210ENST00000572787 PRR9Q5T870 116 aa2.72□□□□□ -1.97
TOPBP1-210ENST00000572787 TTTY12Q9BZ98 90 aa2.72□□□□□ -1.97
TOPBP1-210ENST00000572787 LINC00846Q9NV44 126 aa2.72□□□□□ -1.97
TOPBP1-210ENST00000572787 USP32Q8NFA0 1604 aa2.71□□□□□ -1.97
TOPBP1-210ENST00000572787 ATP7BP35670 1465 aa2.71□□□□□ -1.97
TOPBP1-210ENST00000572787 FXYD6-FXYD2A0A087WZ82 144 aa2.71□□□□□ -1.98
TOPBP1-210ENST00000572787 TRGV4A0A0C4DH28 118 aa2.71□□□□□ -1.98
TOPBP1-210ENST00000572787 IGKV2-24A0A0C4DH68 120 aa2.71□□□□□ -1.98
TOPBP1-210ENST00000572787 TRBV7-4A0A0J9YYF1 115 aa2.71□□□□□ -1.98
TOPBP1-210ENST00000572787 CTXND1A0A1B0GTU2 59 aa2.71□□□□□ -1.98
TOPBP1-210ENST00000572787 IGLV3-19P01714 112 aa2.71□□□□□ -1.98
TOPBP1-210ENST00000572787 ATXN8Q156A1 80 aa2.71□□□□□ -1.98
TOPBP1-210ENST00000572787 CRYBG1Q9Y4K1 1723 aa2.71□□□□□ -1.98
TOPBP1-210ENST00000572787 UGGT1Q9NYU2 1555 aa2.7□□□□□ -1.98
TOPBP1-210ENST00000572787 MROH2AA6NES4 1674 aa2.7□□□□□ -1.98
TOPBP1-210ENST00000572787 ALS2Q96Q42 1657 aa2.7□□□□□ -1.98
TOPBP1-210ENST00000572787 A0A087WVE0 104 aa2.7□□□□□ -1.98
TOPBP1-210ENST00000572787 LOC110117498A0A087WWA1 95 aa2.7□□□□□ -1.98
TOPBP1-210ENST00000572787 M0R2N4 97 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms