RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 IGHV3-30P01768 117 aa9.56□□□□□ -0.88
LINC00563-201ENST00000566370 IGHV3-30-5P0DP03 117 aa9.56□□□□□ -0.88
LINC00563-201ENST00000566370 KIR2DL5BQ8NHK3 375 aa9.56□□□□□ -0.88
LINC00563-201ENST00000566370 COPS9Q8WXC6 57 aa9.56□□□□□ -0.88
LINC00563-201ENST00000566370 WNK1Q9H4A3 2382 aa9.56□□□□□ -0.88
LINC00563-201ENST00000566370 UNC79Q9P2D8 2635 aa9.56□□□□□ -0.88
LINC00563-201ENST00000566370 APOC4P55056 127 aa9.56□□□□□ -0.88
LINC00563-201ENST00000566370 CIRBPQ14011 172 aaKnown RBP9.56□□□□□ -0.88
LINC00563-201ENST00000566370 OCIAD2Q56VL3 154 aa9.56□□□□□ -0.88
LINC00563-201ENST00000566370 VSIG2Q96IQ7 327 aa9.56□□□□□ -0.88
LINC00563-201ENST00000566370 NDUFA12Q9UI09 145 aa9.56□□□□□ -0.88
LINC00563-201ENST00000566370 F8W1H4 67 aa9.55□□□□□ -0.88
LINC00563-201ENST00000566370 APOMO95445 188 aa9.55□□□□□ -0.88
LINC00563-201ENST00000566370 KRTAP10-3P60369 221 aa9.55□□□□□ -0.88
LINC00563-201ENST00000566370 RNASE13Q5GAN3 156 aaKnown RBP9.55□□□□□ -0.88
LINC00563-201ENST00000566370 FAM19A3Q7Z5A8 133 aa9.55□□□□□ -0.88
LINC00563-201ENST00000566370 IGLV5-45A0A087WSX0 123 aa9.54□□□□□ -0.88
LINC00563-201ENST00000566370 A0A0J9YXY3 114 aa9.54□□□□□ -0.88
LINC00563-201ENST00000566370 PLAC8L1A1L4L8 177 aa9.54□□□□□ -0.88
LINC00563-201ENST00000566370 TIMM17BO60830 172 aa9.54□□□□□ -0.88
LINC00563-201ENST00000566370 CRLF1O75462 422 aa9.54□□□□□ -0.88
LINC00563-201ENST00000566370 Q9UF83 564 aa9.54□□□□□ -0.88
LINC00563-201ENST00000566370 PRO1854Q9UHT4 67 aa9.54□□□□□ -0.88
LINC00563-201ENST00000566370 J3QR89 54 aa9.53□□□□□ -0.88
LINC00563-201ENST00000566370 SPINK8P0C7L1 97 aa9.53□□□□□ -0.88
LINC00563-201ENST00000566370 ZFAND6Q6FIF0 208 aa9.53□□□□□ -0.88
LINC00563-201ENST00000566370 FAM104AQ969W3 186 aa9.53□□□□□ -0.88
LINC00563-201ENST00000566370 CSMD2Q7Z408 3487 aa9.52□□□□□ -0.88
LINC00563-201ENST00000566370 HELZ2Q9BYK8 2649 aaKnown RBP9.52□□□□□ -0.89
LINC00563-201ENST00000566370 TRBV20-1A0A075B6N2 111 aa9.52□□□□□ -0.89
LINC00563-201ENST00000566370 A0A0B4J2C4 111 aa9.52□□□□□ -0.89
LINC00563-201ENST00000566370 LYRM9A8MSI8 78 aa9.52□□□□□ -0.89
LINC00563-201ENST00000566370 SBSPONQ8IVN8 264 aa9.52□□□□□ -0.89
LINC00563-201ENST00000566370 C10orf126Q8N4M7 172 aa9.52□□□□□ -0.89
LINC00563-201ENST00000566370 SPANXDQ9BXN6 97 aa9.52□□□□□ -0.89
LINC00563-201ENST00000566370 SPANXCQ9NY87 97 aa9.52□□□□□ -0.89
LINC00563-201ENST00000566370 ZFHX3Q15911 3703 aa9.51□□□□□ -0.89
LINC00563-201ENST00000566370 LOC107984156A0A0G2JMH3 177 aa9.51□□□□□ -0.89
LINC00563-201ENST00000566370 IFITM1P13164 125 aa9.51□□□□□ -0.89
LINC00563-201ENST00000566370 ARL17AQ8IVW1 177 aa9.51□□□□□ -0.89
LINC00563-201ENST00000566370 TRAV8-3A0A0A6YYJ7 113 aa9.5□□□□□ -0.89
LINC00563-201ENST00000566370 NDUFA1O15239 70 aa9.5□□□□□ -0.89
LINC00563-201ENST00000566370 TSPAN13O95857 204 aa9.5□□□□□ -0.89
LINC00563-201ENST00000566370 FHL2Q14192 279 aa9.5□□□□□ -0.89
LINC00563-201ENST00000566370 CDC42SE2Q9NRR3 84 aa9.5□□□□□ -0.89
LINC00563-201ENST00000566370 CDKN2A-AS1Q9UH64 79 aa9.5□□□□□ -0.89
LINC00563-201ENST00000566370 ERG28Q9UKR5 140 aa9.5□□□□□ -0.89
LINC00563-201ENST00000566370 ACANP16112 2415 aa9.5□□□□□ -0.89
LINC00563-201ENST00000566370 A4D1N5 150 aa9.49□□□□□ -0.89
LINC00563-201ENST00000566370 SCGB1C2P0DMR2 95 aa9.49□□□□□ -0.89
LINC00563-201ENST00000566370 DEFB130BP0DP73 79 aa9.49□□□□□ -0.89
LINC00563-201ENST00000566370 DEFB130AP0DP74 79 aa9.49□□□□□ -0.89
LINC00563-201ENST00000566370 HERV-K104P63124 156 aa9.49□□□□□ -0.89
LINC00563-201ENST00000566370 MIAQ16674 131 aa9.49□□□□□ -0.89
LINC00563-201ENST00000566370 RNF151Q2KHN1 245 aa9.49□□□□□ -0.89
LINC00563-201ENST00000566370 NTM-AS1Q6ZSK4 140 aa9.49□□□□□ -0.89
LINC00563-201ENST00000566370 MUSTN1Q8IVN3 82 aa9.49□□□□□ -0.89
LINC00563-201ENST00000566370 LINC00612Q8N6U2 182 aa9.49□□□□□ -0.89
LINC00563-201ENST00000566370 VPS25Q9BRG1 176 aa9.49□□□□□ -0.89
LINC00563-201ENST00000566370 TRBV6-8A0A0A6YYG3 113 aa9.48□□□□□ -0.89
LINC00563-201ENST00000566370 TRAV13-1A0A0B4J241 112 aa9.48□□□□□ -0.89
LINC00563-201ENST00000566370 PRSS2P07478 247 aa9.48□□□□□ -0.89
LINC00563-201ENST00000566370 CFC1BP0CG36 223 aa9.48□□□□□ -0.89
LINC00563-201ENST00000566370 CFC1P0CG37 223 aa9.48□□□□□ -0.89
LINC00563-201ENST00000566370 PSMB2P49721 201 aa9.48□□□□□ -0.89
LINC00563-201ENST00000566370 Q1RN00 199 aa9.48□□□□□ -0.89
LINC00563-201ENST00000566370 LINC00242Q5T6M2 205 aa9.48□□□□□ -0.89
LINC00563-201ENST00000566370 RNF183Q96D59 192 aa9.48□□□□□ -0.89
LINC00563-201ENST00000566370 CITED1Q99966 193 aa9.48□□□□□ -0.89
LINC00563-201ENST00000566370 CHCHD5Q9BSY4 110 aa9.48□□□□□ -0.89
LINC00563-201ENST00000566370 LINC00694P0DN24 101 aa9.48□□□□□ -0.89
LINC00563-201ENST00000566370 PRO0255Q9UI72 69 aa9.48□□□□□ -0.89
LINC00563-201ENST00000566370 FASNP49327 2511 aaKnown RBP9.47□□□□□ -0.89
LINC00563-201ENST00000566370 IGLV5-39A0A0G2JS06 123 aa9.47□□□□□ -0.89
LINC00563-201ENST00000566370 H3BMG7 143 aa9.47□□□□□ -0.89
LINC00563-201ENST00000566370 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.47□□□□□ -0.89
LINC00563-201ENST00000566370 ATP6V0E2Q8NHE4 81 aa9.47□□□□□ -0.89
LINC00563-201ENST00000566370 MTORP42345 2549 aa9.46□□□□□ -0.89
LINC00563-201ENST00000566370 COX6CP09669 75 aa9.46□□□□□ -0.9
LINC00563-201ENST00000566370 GAGE6Q13070 117 aa9.46□□□□□ -0.9
LINC00563-201ENST00000566370 X6R8D5 127 aa9.46□□□□□ -0.9
LINC00563-201ENST00000566370 ITPR2Q14571 2701 aa9.45□□□□□ -0.9
LINC00563-201ENST00000566370 RBX1P62877 108 aa9.45□□□□□ -0.9
LINC00563-201ENST00000566370 SFTA2Q6UW10 78 aa9.45□□□□□ -0.9
LINC00563-201ENST00000566370 LOC100131303A0A0U1RQF7 123 aa9.44□□□□□ -0.9
LINC00563-201ENST00000566370 TEX48A0A1B0GUV7 120 aa9.44□□□□□ -0.9
LINC00563-201ENST00000566370 SMIM1B2RUZ4 78 aa9.44□□□□□ -0.9
LINC00563-201ENST00000566370 MIFP14174 115 aa9.44□□□□□ -0.9
LINC00563-201ENST00000566370 GYPEP15421 78 aa9.44□□□□□ -0.9
LINC00563-201ENST00000566370 MEIG1Q5JSS6 88 aa9.44□□□□□ -0.9
LINC00563-201ENST00000566370 Q9H8V8 135 aa9.44□□□□□ -0.9
LINC00563-201ENST00000566370 IGHV3-33P01772 117 aa9.43□□□□□ -0.9
LINC00563-201ENST00000566370 DAD1P61803 113 aa9.43□□□□□ -0.9
LINC00563-201ENST00000566370 PRIMA1Q86XR5 153 aa9.43□□□□□ -0.9
LINC00563-201ENST00000566370 LITAFQ99732 161 aa9.43□□□□□ -0.9
LINC00563-201ENST00000566370 G3V4G9 280 aa9.42□□□□□ -0.9
LINC00563-201ENST00000566370 PAX4O43316 350 aa9.42□□□□□ -0.9
LINC00563-201ENST00000566370 COX6A2Q02221 97 aa9.42□□□□□ -0.9
LINC00563-201ENST00000566370 FAM222AQ5U5X8 452 aa9.42□□□□□ -0.9
LINC00563-201ENST00000566370 WFDC9Q8NEX5 89 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms