RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 JMJD1CQ15652 2540 aa8.07□□□□□ -1.12
CLPX-204ENST00000559152 GTSF1LQ9H1H1 148 aa8.07□□□□□ -1.12
CLPX-204ENST00000559152 GEMIN7Q9H840 131 aaKnown RBP8.07□□□□□ -1.12
CLPX-204ENST00000559152 NACAE9PAV3 2078 aa8.06□□□□□ -1.12
CLPX-204ENST00000559152 IGHV1-58A0A0C4DH39 117 aa8.06□□□□□ -1.12
CLPX-204ENST00000559152 GAGE7O76087 117 aa8.06□□□□□ -1.12
CLPX-204ENST00000559152 GAGE12FP0CL80 117 aa8.06□□□□□ -1.12
CLPX-204ENST00000559152 GAGE12GP0CL81 117 aa8.06□□□□□ -1.12
CLPX-204ENST00000559152 GAGE12IP0CL82 117 aa8.06□□□□□ -1.12
CLPX-204ENST00000559152 NAA38Q9BRA0 125 aaKnown RBP8.06□□□□□ -1.12
CLPX-204ENST00000559152 TIRAPP58753 221 aa8.06□□□□□ -1.12
CLPX-204ENST00000559152 Q6ZUT4 128 aa8.06□□□□□ -1.12
CLPX-204ENST00000559152 SMIM9A6NGZ8 99 aa8.05□□□□□ -1.12
CLPX-204ENST00000559152 TMEM238C9JI98 176 aa8.05□□□□□ -1.12
CLPX-204ENST00000559152 H7C423 109 aa8.05□□□□□ -1.12
CLPX-204ENST00000559152 IGHV3-30-3P0DP02 117 aa8.05□□□□□ -1.12
CLPX-204ENST00000559152 UBE2D1P51668 147 aa8.05□□□□□ -1.12
CLPX-204ENST00000559152 TRGV4A0A0C4DH28 118 aa8.05□□□□□ -1.12
CLPX-204ENST00000559152 GAGE12JA6NER3 117 aa8.05□□□□□ -1.12
CLPX-204ENST00000559152 CRLF1O75462 422 aa8.05□□□□□ -1.12
CLPX-204ENST00000559152 IGHV3-30P01768 117 aa8.05□□□□□ -1.12
CLPX-204ENST00000559152 IGHV3-30-5P0DP03 117 aa8.05□□□□□ -1.12
CLPX-204ENST00000559152 GAGE4Q13068 117 aa8.05□□□□□ -1.12
CLPX-204ENST00000559152 GAGE5Q13069 117 aa8.05□□□□□ -1.12
CLPX-204ENST00000559152 GAGE13Q4V321 117 aa8.05□□□□□ -1.12
CLPX-204ENST00000559152 WNK1Q9H4A3 2382 aa8.04□□□□□ -1.12
CLPX-204ENST00000559152 HERVK_113P63121 156 aa8.04□□□□□ -1.12
CLPX-204ENST00000559152 KIR2DL5BQ8NHK3 375 aa8.04□□□□□ -1.12
CLPX-204ENST00000559152 IGLV5-45A0A087WSX0 123 aa8.03□□□□□ -1.12
CLPX-204ENST00000559152 UBE2L6O14933 153 aa8.03□□□□□ -1.12
CLPX-204ENST00000559152 RNASE13Q5GAN3 156 aaKnown RBP8.03□□□□□ -1.12
CLPX-204ENST00000559152 FAM19A3Q7Z5A8 133 aa8.03□□□□□ -1.12
CLPX-204ENST00000559152 VSIG2Q96IQ7 327 aa8.03□□□□□ -1.12
CLPX-204ENST00000559152 IGHV3-64A0A075B6Q5 118 aa8.03□□□□□ -1.12
CLPX-204ENST00000559152 RPL24P83731 157 aaKnown RBP8.03□□□□□ -1.12
CLPX-204ENST00000559152 TMEM101Q96IK0 257 aa8.03□□□□□ -1.12
CLPX-204ENST00000559152 TMEM243Q9BU79 118 aa8.03□□□□□ -1.12
CLPX-204ENST00000559152 LYRM7Q5U5X0 104 aa8.02□□□□□ -1.13
CLPX-204ENST00000559152 SBSPONQ8IVN8 264 aa8.02□□□□□ -1.13
CLPX-204ENST00000559152 A0A0J9YXY3 114 aa8.02□□□□□ -1.13
CLPX-204ENST00000559152 NTM-AS1Q6ZSK4 140 aa8.02□□□□□ -1.13
CLPX-204ENST00000559152 PGPEP1Q9NXJ5 209 aa8.02□□□□□ -1.13
CLPX-204ENST00000559152 FHL2Q14192 279 aa8.01□□□□□ -1.13
CLPX-204ENST00000559152 CITED1Q99966 193 aa8.01□□□□□ -1.13
CLPX-204ENST00000559152 NDUFA12Q9UI09 145 aa8.01□□□□□ -1.13
CLPX-204ENST00000559152 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.01□□□□□ -1.13
CLPX-204ENST00000559152 K7ERU9 68 aa8.01□□□□□ -1.13
CLPX-204ENST00000559152 OCIAD2Q56VL3 154 aa8.01□□□□□ -1.13
CLPX-204ENST00000559152 C10orf126Q8N4M7 172 aa8.01□□□□□ -1.13
CLPX-204ENST00000559152 LINC00612Q8N6U2 182 aa8.01□□□□□ -1.13
CLPX-204ENST00000559152 CDC42SE2Q9NRR3 84 aa8.01□□□□□ -1.13
CLPX-204ENST00000559152 TRAV8-3A0A0A6YYJ7 113 aa8□□□□□ -1.13
CLPX-204ENST00000559152 F8W1H4 67 aa8□□□□□ -1.13
CLPX-204ENST00000559152 APOMO95445 188 aa8□□□□□ -1.13
CLPX-204ENST00000559152 LINC00694P0DN24 101 aa8□□□□□ -1.13
CLPX-204ENST00000559152 APOC4P55056 127 aa8□□□□□ -1.13
CLPX-204ENST00000559152 ZFAND6Q6FIF0 208 aa8□□□□□ -1.13
CLPX-204ENST00000559152 SPINK8P0C7L1 97 aa7.99□□□□□ -1.13
CLPX-204ENST00000559152 LINC00242Q5T6M2 205 aa7.99□□□□□ -1.13
CLPX-204ENST00000559152 CDKN2A-AS1Q9UH64 79 aa7.99□□□□□ -1.13
CLPX-204ENST00000559152 PRO1854Q9UHT4 67 aa7.99□□□□□ -1.13
CLPX-204ENST00000559152 CBY1Q9Y3M2 126 aa7.99□□□□□ -1.13
CLPX-204ENST00000559152 C2CD3Q4AC94 2353 aa7.99□□□□□ -1.13
CLPX-204ENST00000559152 TIMM17BO60830 172 aa7.98□□□□□ -1.13
CLPX-204ENST00000559152 CFC1BP0CG36 223 aa7.98□□□□□ -1.13
CLPX-204ENST00000559152 CFC1P0CG37 223 aa7.98□□□□□ -1.13
CLPX-204ENST00000559152 SPANXDQ9BXN6 97 aa7.98□□□□□ -1.13
CLPX-204ENST00000559152 SPANXCQ9NY87 97 aa7.98□□□□□ -1.13
CLPX-204ENST00000559152 A0A0B4J2C4 111 aa7.98□□□□□ -1.13
CLPX-204ENST00000559152 LYRM9A8MSI8 78 aa7.98□□□□□ -1.13
CLPX-204ENST00000559152 TSPAN13O95857 204 aa7.98□□□□□ -1.13
CLPX-204ENST00000559152 CIRBPQ14011 172 aaKnown RBP7.98□□□□□ -1.13
CLPX-204ENST00000559152 MUSTN1Q8IVN3 82 aa7.98□□□□□ -1.13
CLPX-204ENST00000559152 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.98□□□□□ -1.13
CLPX-204ENST00000559152 X6R8D5 127 aa7.98□□□□□ -1.13
CLPX-204ENST00000559152 TRBV6-8A0A0A6YYG3 113 aa7.97□□□□□ -1.13
CLPX-204ENST00000559152 A4D1N5 150 aa7.97□□□□□ -1.13
CLPX-204ENST00000559152 NDUFA1O15239 70 aa7.97□□□□□ -1.13
CLPX-204ENST00000559152 DEFB130BP0DP73 79 aa7.97□□□□□ -1.13
CLPX-204ENST00000559152 DEFB130AP0DP74 79 aa7.97□□□□□ -1.13
CLPX-204ENST00000559152 ATRQ13535 2644 aa7.97□□□□□ -1.13
CLPX-204ENST00000559152 TENM1Q9UKZ4 2725 aa7.97□□□□□ -1.13
CLPX-204ENST00000559152 TRAV13-1A0A0B4J241 112 aa7.97□□□□□ -1.13
CLPX-204ENST00000559152 IGLV5-39A0A0G2JS06 123 aa7.97□□□□□ -1.13
CLPX-204ENST00000559152 LOC100131303A0A0U1RQF7 123 aa7.97□□□□□ -1.13
CLPX-204ENST00000559152 WFDC9Q8NEX5 89 aa7.97□□□□□ -1.13
CLPX-204ENST00000559152 TRBV20-1A0A075B6N2 111 aa7.96□□□□□ -1.14
CLPX-204ENST00000559152 COX6A2Q02221 97 aa7.96□□□□□ -1.14
CLPX-204ENST00000559152 RNF183Q96D59 192 aa7.96□□□□□ -1.14
CLPX-204ENST00000559152 LOC107984156A0A0G2JMH3 177 aa7.95□□□□□ -1.14
CLPX-204ENST00000559152 IFITM1P13164 125 aa7.95□□□□□ -1.14
CLPX-204ENST00000559152 MIAQ16674 131 aa7.95□□□□□ -1.14
CLPX-204ENST00000559152 ARL17AQ8IVW1 177 aa7.95□□□□□ -1.14
CLPX-204ENST00000559152 COPS9Q8WXC6 57 aa7.95□□□□□ -1.14
CLPX-204ENST00000559152 LITAFQ99732 161 aa7.95□□□□□ -1.14
CLPX-204ENST00000559152 H3BMG7 143 aa7.95□□□□□ -1.14
CLPX-204ENST00000559152 PRSS2P07478 247 aa7.95□□□□□ -1.14
CLPX-204ENST00000559152 PRO0255Q9UI72 69 aa7.95□□□□□ -1.14
CLPX-204ENST00000559152 WIPF1O43516 503 aa7.94□□□□□ -1.14
CLPX-204ENST00000559152 RBX1P62877 108 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms