RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 GEMIN7Q9H840 131 aaKnown RBP15.19■□□□□ 0.02
ARHGEF40-204ENST00000555038 SETXQ7Z333 2677 aaKnown RBP15.18■□□□□ 0.02
ARHGEF40-204ENST00000555038 MTORP42345 2549 aa15.18■□□□□ 0.02
ARHGEF40-204ENST00000555038 HIVEP2P31629 2446 aa15.18■□□□□ 0.02
ARHGEF40-204ENST00000555038 CUBNO60494 3623 aa15.18■□□□□ 0.02
ARHGEF40-204ENST00000555038 F8W1H4 67 aa15.18■□□□□ 0.02
ARHGEF40-204ENST00000555038 FAM19A3Q7Z5A8 133 aa15.18■□□□□ 0.02
ARHGEF40-204ENST00000555038 VSIG2Q96IQ7 327 aa15.18■□□□□ 0.02
ARHGEF40-204ENST00000555038 INSL3P51460 131 aa15.17■□□□□ 0.02
ARHGEF40-204ENST00000555038 RNASE13Q5GAN3 156 aaKnown RBP15.17■□□□□ 0.02
ARHGEF40-204ENST00000555038 C10orf126Q8N4M7 172 aa15.17■□□□□ 0.02
ARHGEF40-204ENST00000555038 IGHV3-64A0A075B6Q5 118 aa15.16■□□□□ 0.02
ARHGEF40-204ENST00000555038 TRGV2A0A075B6R0 118 aa15.16■□□□□ 0.02
ARHGEF40-204ENST00000555038 A0A0J9YXY3 114 aa15.16■□□□□ 0.02
ARHGEF40-204ENST00000555038 RPL24P83731 157 aaKnown RBP15.16■□□□□ 0.02
ARHGEF40-204ENST00000555038 NOTCH2Q04721 2471 aa15.16■□□□□ 0.02
ARHGEF40-204ENST00000555038 SBSPONQ8IVN8 264 aa15.16■□□□□ 0.02
ARHGEF40-204ENST00000555038 HERVK_113P63121 156 aa15.15■□□□□ 0.02
ARHGEF40-204ENST00000555038 H7C423 109 aa15.14■□□□□ 0.01
ARHGEF40-204ENST00000555038 GAGE7O76087 117 aa15.14■□□□□ 0.01
ARHGEF40-204ENST00000555038 APOMO95445 188 aa15.14■□□□□ 0.01
ARHGEF40-204ENST00000555038 TSPAN13O95857 204 aa15.14■□□□□ 0.01
ARHGEF40-204ENST00000555038 GAGE12FP0CL80 117 aa15.14■□□□□ 0.01
ARHGEF40-204ENST00000555038 GAGE12GP0CL81 117 aa15.14■□□□□ 0.01
ARHGEF40-204ENST00000555038 GAGE12IP0CL82 117 aa15.14■□□□□ 0.01
ARHGEF40-204ENST00000555038 GAGE12JA6NER3 117 aa15.13■□□□□ 0.01
ARHGEF40-204ENST00000555038 CFC1BP0CG36 223 aa15.13■□□□□ 0.01
ARHGEF40-204ENST00000555038 CFC1P0CG37 223 aa15.13■□□□□ 0.01
ARHGEF40-204ENST00000555038 GAGE4Q13068 117 aa15.13■□□□□ 0.01
ARHGEF40-204ENST00000555038 GAGE5Q13069 117 aa15.13■□□□□ 0.01
ARHGEF40-204ENST00000555038 GAGE13Q4V321 117 aa15.13■□□□□ 0.01
ARHGEF40-204ENST00000555038 NTM-AS1Q6ZSK4 140 aa15.13■□□□□ 0.01
ARHGEF40-204ENST00000555038 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.13■□□□□ 0.01
ARHGEF40-204ENST00000555038 ZFAND6Q6FIF0 208 aa15.13■□□□□ 0.01
ARHGEF40-204ENST00000555038 NDUFA12Q9UI09 145 aa15.13■□□□□ 0.01
ARHGEF40-204ENST00000555038 TRAV8-3A0A0A6YYJ7 113 aa15.12■□□□□ 0.01
ARHGEF40-204ENST00000555038 A0A0B4J2C4 111 aa15.12■□□□□ 0.01
ARHGEF40-204ENST00000555038 PRO1854Q9UHT4 67 aa15.12■□□□□ 0.01
ARHGEF40-204ENST00000555038 SPANXDQ9BXN6 97 aa15.11■□□□□ 0.01
ARHGEF40-204ENST00000555038 SPANXCQ9NY87 97 aa15.11■□□□□ 0.01
ARHGEF40-204ENST00000555038 TIMM17BO60830 172 aa15.11■□□□□ 0.01
ARHGEF40-204ENST00000555038 TMEM243Q9BU79 118 aa15.11■□□□□ 0.01
ARHGEF40-204ENST00000555038 TRGV4A0A0C4DH28 118 aa15.1■□□□□ 0.01
ARHGEF40-204ENST00000555038 A4D1N5 150 aa15.1■□□□□ 0.01
ARHGEF40-204ENST00000555038 H3BMG7 143 aa15.1■□□□□ 0.01
ARHGEF40-204ENST00000555038 SPINK8P0C7L1 97 aa15.1■□□□□ 0.01
ARHGEF40-204ENST00000555038 C9orf66Q5T8R8 295 aa15.1■□□□□ 0.01
ARHGEF40-204ENST00000555038 KIR2DL5BQ8NHK3 375 aa15.1■□□□□ 0.01
ARHGEF40-204ENST00000555038 LITAFQ99732 161 aa15.1■□□□□ 0.01
ARHGEF40-204ENST00000555038 CDKN2A-AS1Q9UH64 79 aa15.1■□□□□ 0.01
ARHGEF40-204ENST00000555038 SETD2Q9BYW2 2564 aaPredicted RBP15.09■□□□□ 0.01
ARHGEF40-204ENST00000555038 LINC00694P0DN24 101 aa15.09■□□□□ 0.01
ARHGEF40-204ENST00000555038 MUSTN1Q8IVN3 82 aa15.09■□□□□ 0.01
ARHGEF40-204ENST00000555038 RNF151Q2KHN1 245 aa15.08■□□□□ 0.01
ARHGEF40-204ENST00000555038 LINC00242Q5T6M2 205 aa15.08■□□□□ 0.01
ARHGEF40-204ENST00000555038 TMEM101Q96IK0 257 aa15.08■□□□□ 0.01
ARHGEF40-204ENST00000555038 CDC42SE2Q9NRR3 84 aa15.08■□□□□ 0.01
ARHGEF40-204ENST00000555038 SMIM9A6NGZ8 99 aa15.08■□□□□ 0
ARHGEF40-204ENST00000555038 CYSRT1A8MQ03 144 aa15.08■□□□□ 0
ARHGEF40-204ENST00000555038 G3V4G9 280 aa15.08■□□□□ 0
ARHGEF40-204ENST00000555038 UBE2L6O14933 153 aa15.08■□□□□ 0
ARHGEF40-204ENST00000555038 TRBV20-1A0A075B6N2 111 aa15.07■□□□□ 0
ARHGEF40-204ENST00000555038 IGLV5-39A0A0G2JS06 123 aa15.07■□□□□ 0
ARHGEF40-204ENST00000555038 INAFM1C9JVW0 142 aa15.07■□□□□ 0
ARHGEF40-204ENST00000555038 NDUFA1O15239 70 aa15.07■□□□□ 0
ARHGEF40-204ENST00000555038 LINC00612Q8N6U2 182 aa15.07■□□□□ 0
ARHGEF40-204ENST00000555038 RNF183Q96D59 192 aa15.07■□□□□ 0
ARHGEF40-204ENST00000555038 FHL2Q14192 279 aa15.06■□□□□ 0
ARHGEF40-204ENST00000555038 VPS25Q9BRG1 176 aa15.06■□□□□ 0
ARHGEF40-204ENST00000555038 PRO0461Q9UI25 63 aa15.06■□□□□ 0
ARHGEF40-204ENST00000555038 LOC107984156A0A0G2JMH3 177 aa15.05■□□□□ -0
ARHGEF40-204ENST00000555038 MIAQ16674 131 aa15.05■□□□□ -0
ARHGEF40-204ENST00000555038 ARL17AQ8IVW1 177 aa15.05■□□□□ -0
ARHGEF40-204ENST00000555038 IFITM1P13164 125 aa15.03■□□□□ -0
ARHGEF40-204ENST00000555038 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.03■□□□□ -0
ARHGEF40-204ENST00000555038 CRLF1O75462 422 aa15.03■□□□□ -0
ARHGEF40-204ENST00000555038 IGHV3-33P01772 117 aa15.03■□□□□ -0
ARHGEF40-204ENST00000555038 COX6A2Q02221 97 aa15.03■□□□□ -0
ARHGEF40-204ENST00000555038 ERG28Q9UKR5 140 aa15.03■□□□□ -0
ARHGEF40-204ENST00000555038 OTOGQ6ZRI0 2925 aa15.03■□□□□ -0
ARHGEF40-204ENST00000555038 WFDC2Q14508 124 aa15.02□□□□□ -0.01
ARHGEF40-204ENST00000555038 JMJD1CQ15652 2540 aa15.02□□□□□ -0.01
ARHGEF40-204ENST00000555038 CIRBPQ14011 172 aaKnown RBP15.01□□□□□ -0.01
ARHGEF40-204ENST00000555038 TRBV6-8A0A0A6YYG3 113 aa15□□□□□ -0.01
ARHGEF40-204ENST00000555038 TRAV13-1A0A0B4J241 112 aa15□□□□□ -0.01
ARHGEF40-204ENST00000555038 LOC100131303A0A0U1RQF7 123 aa15□□□□□ -0.01
ARHGEF40-204ENST00000555038 A8MZ25 164 aa15□□□□□ -0.01
ARHGEF40-204ENST00000555038 SMIM1B2RUZ4 78 aa15□□□□□ -0.01
ARHGEF40-204ENST00000555038 J3QR89 54 aa15□□□□□ -0.01
ARHGEF40-204ENST00000555038 PSMB2P49721 201 aa15□□□□□ -0.01
ARHGEF40-204ENST00000555038 TEX48A0A1B0GUV7 120 aa14.99□□□□□ -0.01
ARHGEF40-204ENST00000555038 EIF4EBP3O60516 100 aaPredicted RBP14.99□□□□□ -0.01
ARHGEF40-204ENST00000555038 ADAMTSL4-AS1Q5T5F5 129 aa14.99□□□□□ -0.01
ARHGEF40-204ENST00000555038 X6R8D5 127 aa14.99□□□□□ -0.01
ARHGEF40-204ENST00000555038 PRSS2P07478 247 aa14.98□□□□□ -0.01
ARHGEF40-204ENST00000555038 COPS9Q8WXC6 57 aa14.98□□□□□ -0.01
ARHGEF40-204ENST00000555038 ATP6V0E2Q8NHE4 81 aa14.97□□□□□ -0.01
ARHGEF40-204ENST00000555038 CITED1Q99966 193 aa14.97□□□□□ -0.01
ARHGEF40-204ENST00000555038 LYRM9A8MSI8 78 aa14.96□□□□□ -0.01
ARHGEF40-204ENST00000555038 F5H768 121 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms