RNA–Protein interactions for RNA: ENST00000549015.1

LGR5-205, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-205ENST00000549015 GTSF1LQ9H1H1 148 aa1.2□□□□□ -2.22
LGR5-205ENST00000549015 CBY1Q9Y3M2 126 aa1.2□□□□□ -2.22
LGR5-205ENST00000549015 TIMM8BQ9Y5J9 83 aaPredicted RBP1.2□□□□□ -2.22
LGR5-205ENST00000549015 TNFRSF18Q9Y5U5 241 aa1.2□□□□□ -2.22
LGR5-205ENST00000549015 SPCS1Q9Y6A9 102 aa1.2□□□□□ -2.22
LGR5-205ENST00000549015 ANKRD17O75179 2603 aaKnown RBP1.2□□□□□ -2.22
LGR5-205ENST00000549015 FBN2P35556 2912 aa1.2□□□□□ -2.22
LGR5-205ENST00000549015 KMT2BQ9UMN6 2715 aaPredicted RBP1.2□□□□□ -2.22
LGR5-205ENST00000549015 SPG11Q96JI7 2443 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 POLQO75417 2590 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 ABCA12Q86UK0 2595 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 CENPEQ02224 2701 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 ITPR3Q14573 2671 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 TRAV12-2A0A075B6T6 113 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 TRAV8-6A0A0B4J262 113 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 IGHV1-58A0A0C4DH39 117 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 TMEM223A0PJW6 202 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 KNCNA6PVL3 124 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 LYRM9A8MSI8 78 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 SMIM1B2RUZ4 78 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 F8W1H4 67 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 G3V4G9 280 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 H3BUT2 72 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 J3QQQ9 107 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 UBE2L6O14933 153 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 NDUFA1O15239 70 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 IGHV3-30P01768 117 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 SLPIP03973 132 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 P0DMU3 169 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 FAM231AP0DMU4 169 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 FAM231CP0DMU5 169 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 LINC00694P0DN24 101 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 IGHV3-30-5P0DP03 117 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 ZNF22P17026 224 aaPredicted RBP1.19□□□□□ -2.22
LGR5-205ENST00000549015 AZU1P20160 251 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 CXCL5P42830 114 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 FXYD2P54710 66 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 APOC4P55056 127 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 TCTAP57738 103 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 DEFB1P60022 68 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 UBE2D3P61077 147 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 UBE2D2P62837 147 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 CIRBPQ14011 172 aaKnown RBP1.19□□□□□ -2.22
LGR5-205ENST00000549015 RRN3P1Q2M238 152 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 DEFB136Q30KP8 78 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 OCIAD2Q56VL3 154 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 TMEM170BQ5T4T1 132 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 C9orf66Q5T8R8 295 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 FAM222AQ5U5X8 452 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 ZFAND6Q6FIF0 208 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 Q6ZQT7 251 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 SH2D6Q7Z4S9 175 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 PRIMA1Q86XR5 153 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 C1orf158Q8N1D5 194 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 LINC01561Q8N1V8 128 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 MTURNQ8N3F0 131 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 C10orf126Q8N4M7 172 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 MAPK1IP1LQ8NDC0 245 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 ZNRF2Q8NHG8 242 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 TMEM101Q96IK0 257 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 VSIG2Q96IQ7 327 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 PRAC1Q96KF2 57 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 LINC01600Q96MT4 127 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 FAM218AQ96MZ4 157 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 HIST1H4GQ99525 98 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 CHCHD7Q9BUK0 85 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 SPANXDQ9BXN6 97 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 KRTAP4-9Q9BYQ8 210 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 Q9HAA7 133 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 ESM1Q9NQ30 184 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 MRPL16Q9NX20 251 aaKnown RBP1.19□□□□□ -2.22
LGR5-205ENST00000549015 NHP2Q9NX24 153 aaKnown RBP1.19□□□□□ -2.22
LGR5-205ENST00000549015 SPANXCQ9NY87 97 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 UBE2D4Q9Y2X8 147 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 CHD6Q8TD26 2715 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 WNK2Q9Y3S1 2297 aa1.19□□□□□ -2.22
LGR5-205ENST00000549015 ABCA1O95477 2261 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 PLXNB1O43157 2135 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 FLNAP21333 2647 aaKnown RBP1.18□□□□□ -2.22
LGR5-205ENST00000549015 HELZ2Q9BYK8 2649 aaKnown RBP1.18□□□□□ -2.22
LGR5-205ENST00000549015 TRGV2A0A075B6R0 118 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 TRGV1A0A0A0MS02 117 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 TRBV30A0A0K0K1B3 111 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 A0A1B0GUV1 79 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 PLAC8L1A1L4L8 177 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 IGLL5B9A064 214 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 H3BMG7 143 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 CRLF1O75462 422 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 IGKV3-20P01619 116 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 COX6CP09669 75 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 IGHV3-30-3P0DP02 117 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 PRB4P10163 310 aaPredicted RBP1.18□□□□□ -2.22
LGR5-205ENST00000549015 MIFP14174 115 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 RPL13AP40429 203 aaKnown RBP1.18□□□□□ -2.22
LGR5-205ENST00000549015 FXYD7P58549 80 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 RPL39P62891 51 aaKnown RBP1.18□□□□□ -2.22
LGR5-205ENST00000549015 MIAQ16674 131 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 C12orf74Q32Q52 190 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 KRTAP15-1Q3LI76 137 aa1.18□□□□□ -2.22
LGR5-205ENST00000549015 C6orf226Q5I0X4 101 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms