RNA–Protein interactions for RNA: ENST00000549015.1

LGR5-205, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-205ENST00000549015 CHIC1Q5VXU3 224 aa4.58□□□□□ -1.68
LGR5-205ENST00000549015 AEBP2Q6ZN18 517 aaPredicted RBP4.48□□□□□ -1.69
LGR5-205ENST00000549015 PHF23Q9BUL5 403 aaPredicted RBP4.05□□□□□ -1.76
LGR5-205ENST00000549015 PLPPR3Q6T4P5 718 aa3.84□□□□□ -1.79
LGR5-205ENST00000549015 SENP3Q9H4L4 574 aaPredicted RBP3.79□□□□□ -1.8
LGR5-205ENST00000549015 EHMT2Q96KQ7 1210 aa3.64□□□□□ -1.83
LGR5-205ENST00000549015 NISCHQ9Y2I1 1504 aa3.62□□□□□ -1.83
LGR5-205ENST00000549015 ADRA2BP18089 450 aa3.6□□□□□ -1.83
LGR5-205ENST00000549015 KCNA4P22459 653 aa3.58□□□□□ -1.84
LGR5-205ENST00000549015 PPP6R1Q9UPN7 881 aa3.51□□□□□ -1.85
LGR5-205ENST00000549015 FOXD1Q16676 465 aa3.48□□□□□ -1.85
LGR5-205ENST00000549015 SLC4A1APQ9BWU0 796 aaKnown RBP3.46□□□□□ -1.86
LGR5-205ENST00000549015 CSRNP3Q8WYN3 585 aa3.44□□□□□ -1.86
LGR5-205ENST00000549015 PPP4R3CPQ6ZMV5 832 aa3.41□□□□□ -1.86
LGR5-205ENST00000549015 NCBP3Q53F19 620 aaKnown RBP3.4□□□□□ -1.87
LGR5-205ENST00000549015 PIAS4Q8N2W9 510 aaPredicted RBP3.37□□□□□ -1.87
LGR5-205ENST00000549015 POTEDQ86YR6 584 aa3.35□□□□□ -1.87
LGR5-205ENST00000549015 NPM3O75607 178 aaKnown RBP3.33□□□□□ -1.88
LGR5-205ENST00000549015 ZBTB22O15209 634 aa3.29□□□□□ -1.88
LGR5-205ENST00000549015 SLC24A1O60721 1099 aa3.28□□□□□ -1.88
LGR5-205ENST00000549015 SCAF1Q9H7N4 1312 aaKnown RBP3.26□□□□□ -1.89
LGR5-205ENST00000549015 CNKSR2Q8WXI2 1034 aa3.26□□□□□ -1.89
LGR5-205ENST00000549015 RTN4Q9NQC3 1192 aaKnown RBP3.23□□□□□ -1.89
LGR5-205ENST00000549015 AMER1Q5JTC6 1135 aaPredicted RBP3.22□□□□□ -1.89
LGR5-205ENST00000549015 FOXD4L1Q9NU39 408 aa3.22□□□□□ -1.89
LGR5-205ENST00000549015 CCDC180Q9P1Z9 1646 aa3.18□□□□□ -1.9
LGR5-205ENST00000549015 MAPK8IP2Q13387 824 aaPredicted RBP3.15□□□□□ -1.91
LGR5-205ENST00000549015 MSH5O43196 834 aa3.14□□□□□ -1.91
LGR5-205ENST00000549015 FKBP8Q14318 412 aa3.13□□□□□ -1.91
LGR5-205ENST00000549015 RNF216Q9NWF9 866 aaPredicted RBP3.13□□□□□ -1.91
LGR5-205ENST00000549015 DNAJC5BQ9UF47 199 aa3.13□□□□□ -1.91
LGR5-205ENST00000549015 ZCCHC6Q5VYS8 1495 aaKnown RBP3.09□□□□□ -1.92
LGR5-205ENST00000549015 SLC4A2P04920 1241 aa3.08□□□□□ -1.92
LGR5-205ENST00000549015 ATXN8OSP0DMR3 200 aa3.08□□□□□ -1.92
LGR5-205ENST00000549015 MYCNP04198 464 aaPredicted RBP3.07□□□□□ -1.92
LGR5-205ENST00000549015 DCAF1Q9Y4B6 1507 aa3.07□□□□□ -1.92
LGR5-205ENST00000549015 HOXD11P31277 338 aaPredicted RBP3.05□□□□□ -1.92
LGR5-205ENST00000549015 DMRT2Q9Y5R5 561 aa3.05□□□□□ -1.92
LGR5-205ENST00000549015 MYO15BQ96JP2 1530 aa3.03□□□□□ -1.92
LGR5-205ENST00000549015 DCAF8L1A6NGE4 600 aa2.98□□□□□ -1.93
LGR5-205ENST00000549015 DCAF8L2P0C7V8 631 aa2.97□□□□□ -1.93
LGR5-205ENST00000549015 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.97□□□□□ -1.935e-7■□□□□ 9.3
LGR5-205ENST00000549015 ATF5Q9Y2D1 282 aaPredicted RBP2.97□□□□□ -1.93
LGR5-205ENST00000549015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.96□□□□□ -1.94
LGR5-205ENST00000549015 PLCB2Q00722 1185 aa2.96□□□□□ -1.94
LGR5-205ENST00000549015 HNRNPUL2Q1KMD3 747 aaKnown RBP2.96□□□□□ -1.94
LGR5-205ENST00000549015 SAMD1Q6SPF0 538 aaPredicted RBP2.96□□□□□ -1.94
LGR5-205ENST00000549015 FBXO3Q9UK99 471 aa2.96□□□□□ -1.94
LGR5-205ENST00000549015 HAP1P54257 671 aaPredicted RBP2.95□□□□□ -1.94
LGR5-205ENST00000549015 NACADO15069 1562 aa2.93□□□□□ -1.94
LGR5-205ENST00000549015 SPDYE4A6NLX3 237 aa2.92□□□□□ -1.94
LGR5-205ENST00000549015 BCANQ96GW7 911 aa2.92□□□□□ -1.94
LGR5-205ENST00000549015 ZNF219Q9P2Y4 722 aaPredicted RBP2.92□□□□□ -1.94
LGR5-205ENST00000549015 U3KPZ7 1027 aaPredicted RBP2.91□□□□□ -1.94
LGR5-205ENST00000549015 ABCC9O60706 1549 aa2.91□□□□□ -1.94
LGR5-205ENST00000549015 PRKCSHP14314 528 aaPredicted RBP2.9□□□□□ -1.95
LGR5-205ENST00000549015 VASPP50552 380 aaPredicted RBP2.9□□□□□ -1.95
LGR5-205ENST00000549015 APLP2Q06481 763 aa2.88□□□□□ -1.95
LGR5-205ENST00000549015 TAOK2Q9UL54 1235 aa2.88□□□□□ -1.95
LGR5-205ENST00000549015 RB1CC1Q8TDY2 1594 aa2.87□□□□□ -1.95
LGR5-205ENST00000549015 FBLN2P98095 1184 aa2.87□□□□□ -1.95
LGR5-205ENST00000549015 IFNLR1Q8IU57 520 aaPredicted RBP2.87□□□□□ -1.95
LGR5-205ENST00000549015 VSIG10Q8N0Z9 540 aa2.87□□□□□ -1.95
LGR5-205ENST00000549015 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.87□□□□□ -1.95
LGR5-205ENST00000549015 SHROOM4Q9ULL8 1493 aa2.86□□□□□ -1.95
LGR5-205ENST00000549015 PKD2Q13563 968 aa2.85□□□□□ -1.95
LGR5-205ENST00000549015 TPRNQ4KMQ1 711 aa2.85□□□□□ -1.95
LGR5-205ENST00000549015 KLHL34Q8N239 644 aa2.85□□□□□ -1.95
LGR5-205ENST00000549015 MKRN4PQ13434 485 aaPredicted RBP2.84□□□□□ -1.95
LGR5-205ENST00000549015 PAXIP1Q6ZW49 1069 aaPredicted RBP2.84□□□□□ -1.95
LGR5-205ENST00000549015 PROM2Q8N271 834 aa2.84□□□□□ -1.95
LGR5-205ENST00000549015 CFAP44Q96MT7 982 aa2.84□□□□□ -1.95
LGR5-205ENST00000549015 SCRIBQ14160 1630 aa2.83□□□□□ -1.96
LGR5-205ENST00000549015 TRHP20396 242 aaPredicted RBP2.83□□□□□ -1.96
LGR5-205ENST00000549015 BBXQ8WY36 941 aaPredicted RBP2.83□□□□□ -1.96
LGR5-205ENST00000549015 ECM2O94769 699 aaPredicted RBP2.82□□□□□ -1.96
LGR5-205ENST00000549015 POLA2Q14181 598 aa2.82□□□□□ -1.96
LGR5-205ENST00000549015 SPOCK2Q92563 424 aa2.82□□□□□ -1.96
LGR5-205ENST00000549015 KDM2AQ9Y2K7 1162 aa2.82□□□□□ -1.96
LGR5-205ENST00000549015 BAZ1AQ9NRL2 1556 aaPredicted RBP2.82□□□□□ -1.96
LGR5-205ENST00000549015 RSF1Q96T23 1441 aaPredicted RBP2.81□□□□□ -1.96
LGR5-205ENST00000549015 SPRYD3Q8NCJ5 442 aa2.8□□□□□ -1.96
LGR5-205ENST00000549015 SUPT5HO00267 1087 aaKnown RBP2.79□□□□□ -1.96
LGR5-205ENST00000549015 NPM1P06748 294 aaKnown RBP eCLIP2.79□□□□□ -1.96
LGR5-205ENST00000549015 NBR1Q14596 966 aa2.79□□□□□ -1.96
LGR5-205ENST00000549015 PLCD3Q8N3E9 789 aa2.79□□□□□ -1.96
LGR5-205ENST00000549015 PEG3Q9GZU2 1588 aa2.78□□□□□ -1.96
LGR5-205ENST00000549015 RGL2O15211 777 aa2.78□□□□□ -1.96
LGR5-205ENST00000549015 CAPN15O75808 1086 aa2.78□□□□□ -1.96
LGR5-205ENST00000549015 CHGAP10645 457 aaKnown RBP2.78□□□□□ -1.96
LGR5-205ENST00000549015 SPINK5Q9NQ38 1064 aaPredicted RBP2.78□□□□□ -1.96
LGR5-205ENST00000549015 TSHZ2Q9NRE2 1034 aa2.78□□□□□ -1.96
LGR5-205ENST00000549015 MIER1Q8N108 512 aa2.77□□□□□ -1.97
LGR5-205ENST00000549015 CIZ1Q9ULV3 898 aaPredicted RBP2.77□□□□□ -1.97
LGR5-205ENST00000549015 ZBTB12Q9Y330 459 aaPredicted RBP2.77□□□□□ -1.97
LGR5-205ENST00000549015 SMARCA4P51532 1647 aa2.77□□□□□ -1.97
LGR5-205ENST00000549015 TOP2AP11388 1531 aaKnown RBP2.77□□□□□ -1.97
LGR5-205ENST00000549015 STAG3Q9UJ98 1225 aa2.76□□□□□ -1.97
LGR5-205ENST00000549015 EIF4G1Q04637 1599 aaKnown RBP2.75□□□□□ -1.97
LGR5-205ENST00000549015 MROH2BQ7Z745 1585 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms