RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 GAGE4Q13068 117 aa7.72□□□□□ -1.17
NECAP1-206ENST00000542095 GAGE5Q13069 117 aa7.72□□□□□ -1.17
NECAP1-206ENST00000542095 GAGE13Q4V321 117 aa7.72□□□□□ -1.17
NECAP1-206ENST00000542095 TRBV6-4A0A1B0GX49 114 aa7.71□□□□□ -1.17
NECAP1-206ENST00000542095 IGLL5B9A064 214 aa7.71□□□□□ -1.17
NECAP1-206ENST00000542095 CRLF1O75462 422 aa7.71□□□□□ -1.17
NECAP1-206ENST00000542095 SMAGPQ0VAQ4 97 aa7.71□□□□□ -1.17
NECAP1-206ENST00000542095 TRGV4A0A0C4DH28 118 aa7.71□□□□□ -1.18
NECAP1-206ENST00000542095 GEMIN7Q9H840 131 aaKnown RBP7.71□□□□□ -1.18
NECAP1-206ENST00000542095 IGHV1-58A0A0C4DH39 117 aa7.7□□□□□ -1.18
NECAP1-206ENST00000542095 IGHV3-30-3P0DP02 117 aa7.7□□□□□ -1.18
NECAP1-206ENST00000542095 UBE2D1P51668 147 aa7.7□□□□□ -1.18
NECAP1-206ENST00000542095 NTM-AS1Q6ZSK4 140 aa7.7□□□□□ -1.18
NECAP1-206ENST00000542095 GTSF1LQ9H1H1 148 aa7.7□□□□□ -1.18
NECAP1-206ENST00000542095 CSDC2Q9Y534 153 aaKnown RBP7.7□□□□□ -1.18
NECAP1-206ENST00000542095 IGHV3-30P01768 117 aa7.69□□□□□ -1.18
NECAP1-206ENST00000542095 IGHV3-30-5P0DP03 117 aa7.69□□□□□ -1.18
NECAP1-206ENST00000542095 TIRAPP58753 221 aa7.69□□□□□ -1.18
NECAP1-206ENST00000542095 SBSPONQ8IVN8 264 aa7.69□□□□□ -1.18
NECAP1-206ENST00000542095 CITED1Q99966 193 aa7.69□□□□□ -1.18
NECAP1-206ENST00000542095 LINC00694P0DN24 101 aa7.68□□□□□ -1.18
NECAP1-206ENST00000542095 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.68□□□□□ -1.18
NECAP1-206ENST00000542095 KIR2DL5BQ8NHK3 375 aa7.68□□□□□ -1.18
NECAP1-206ENST00000542095 JMJD1CQ15652 2540 aa7.68□□□□□ -1.18
NECAP1-206ENST00000542095 NOTCH3Q9UM47 2321 aa7.68□□□□□ -1.18
NECAP1-206ENST00000542095 OTOGQ6ZRI0 2925 aa7.68□□□□□ -1.18
NECAP1-206ENST00000542095 TRAV8-3A0A0A6YYJ7 113 aa7.68□□□□□ -1.18
NECAP1-206ENST00000542095 SMIM9A6NGZ8 99 aa7.68□□□□□ -1.18
NECAP1-206ENST00000542095 TMEM238C9JI98 176 aa7.68□□□□□ -1.18
NECAP1-206ENST00000542095 UBE2L6O14933 153 aa7.68□□□□□ -1.18
NECAP1-206ENST00000542095 FHL2Q14192 279 aa7.68□□□□□ -1.18
NECAP1-206ENST00000542095 SPATA3Q8NHX4 192 aa7.68□□□□□ -1.18
NECAP1-206ENST00000542095 VSIG2Q96IQ7 327 aa7.68□□□□□ -1.18
NECAP1-206ENST00000542095 TMEM243Q9BU79 118 aa7.68□□□□□ -1.18
NECAP1-206ENST00000542095 IGLV5-45A0A087WSX0 123 aa7.67□□□□□ -1.18
NECAP1-206ENST00000542095 LOC100131303A0A0U1RQF7 123 aa7.67□□□□□ -1.18
NECAP1-206ENST00000542095 SPINK8P0C7L1 97 aa7.67□□□□□ -1.18
NECAP1-206ENST00000542095 HERVK_113P63121 156 aa7.67□□□□□ -1.18
NECAP1-206ENST00000542095 C10orf126Q8N4M7 172 aa7.67□□□□□ -1.18
NECAP1-206ENST00000542095 A0A0J9YXY3 114 aa7.67□□□□□ -1.18
NECAP1-206ENST00000542095 H7C423 109 aa7.67□□□□□ -1.18
NECAP1-206ENST00000542095 TMEM101Q96IK0 257 aa7.67□□□□□ -1.18
NECAP1-206ENST00000542095 C2CD3Q4AC94 2353 aa7.66□□□□□ -1.18
NECAP1-206ENST00000542095 APOMO95445 188 aa7.66□□□□□ -1.18
NECAP1-206ENST00000542095 FAM19A3Q7Z5A8 133 aa7.66□□□□□ -1.18
NECAP1-206ENST00000542095 LINC00612Q8N6U2 182 aa7.66□□□□□ -1.18
NECAP1-206ENST00000542095 PGPEP1Q9NXJ5 209 aa7.66□□□□□ -1.18
NECAP1-206ENST00000542095 CDKN2A-AS1Q9UH64 79 aa7.66□□□□□ -1.18
NECAP1-206ENST00000542095 NDUFA12Q9UI09 145 aa7.66□□□□□ -1.18
NECAP1-206ENST00000542095 NOTCH2Q04721 2471 aa7.66□□□□□ -1.18
NECAP1-206ENST00000542095 FN1P02751 2386 aaKnown RBP7.66□□□□□ -1.18
NECAP1-206ENST00000542095 DEFB130BP0DP73 79 aa7.66□□□□□ -1.18
NECAP1-206ENST00000542095 DEFB130AP0DP74 79 aa7.66□□□□□ -1.18
NECAP1-206ENST00000542095 CDC42SE2Q9NRR3 84 aa7.66□□□□□ -1.18
NECAP1-206ENST00000542095 X6R8D5 127 aa7.66□□□□□ -1.18
NECAP1-206ENST00000542095 RPL24P83731 157 aaKnown RBP7.65□□□□□ -1.18
NECAP1-206ENST00000542095 LINC00242Q5T6M2 205 aa7.65□□□□□ -1.18
NECAP1-206ENST00000542095 APOC4P55056 127 aa7.64□□□□□ -1.19
NECAP1-206ENST00000542095 ZFAND6Q6FIF0 208 aa7.64□□□□□ -1.19
NECAP1-206ENST00000542095 NSD1Q96L73 2696 aaPredicted RBP7.64□□□□□ -1.19
NECAP1-206ENST00000542095 CYSRT1A8MQ03 144 aa7.64□□□□□ -1.19
NECAP1-206ENST00000542095 CFC1BP0CG36 223 aa7.64□□□□□ -1.19
NECAP1-206ENST00000542095 CFC1P0CG37 223 aa7.64□□□□□ -1.19
NECAP1-206ENST00000542095 COX6A2Q02221 97 aa7.64□□□□□ -1.19
NECAP1-206ENST00000542095 TRAV13-1A0A0B4J241 112 aa7.63□□□□□ -1.19
NECAP1-206ENST00000542095 TSPAN13O95857 204 aa7.63□□□□□ -1.19
NECAP1-206ENST00000542095 OCIAD2Q56VL3 154 aa7.63□□□□□ -1.19
NECAP1-206ENST00000542095 MUSTN1Q8IVN3 82 aa7.63□□□□□ -1.19
NECAP1-206ENST00000542095 NIPBLQ6KC79 2804 aaeCLIP7.63□□□□□ -1.19
NECAP1-206ENST00000542095 A8MZ25 164 aa7.63□□□□□ -1.19
NECAP1-206ENST00000542095 TRBV6-8A0A0A6YYG3 113 aa7.62□□□□□ -1.19
NECAP1-206ENST00000542095 A4D1N5 150 aa7.62□□□□□ -1.19
NECAP1-206ENST00000542095 LYRM9A8MSI8 78 aa7.62□□□□□ -1.19
NECAP1-206ENST00000542095 LITAFQ99732 161 aa7.62□□□□□ -1.19
NECAP1-206ENST00000542095 SPANXDQ9BXN6 97 aa7.62□□□□□ -1.19
NECAP1-206ENST00000542095 SPANXCQ9NY87 97 aa7.62□□□□□ -1.19
NECAP1-206ENST00000542095 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.62□□□□□ -1.19
NECAP1-206ENST00000542095 NDUFA1O15239 70 aa7.62□□□□□ -1.19
NECAP1-206ENST00000542095 LYRM7Q5U5X0 104 aa7.62□□□□□ -1.19
NECAP1-206ENST00000542095 WFDC9Q8NEX5 89 aa7.62□□□□□ -1.19
NECAP1-206ENST00000542095 PRO1854Q9UHT4 67 aa7.62□□□□□ -1.19
NECAP1-206ENST00000542095 IGLV5-39A0A0G2JS06 123 aa7.61□□□□□ -1.19
NECAP1-206ENST00000542095 GAGE6Q13070 117 aa7.61□□□□□ -1.19
NECAP1-206ENST00000542095 DEFB135Q30KP9 77 aa7.61□□□□□ -1.19
NECAP1-206ENST00000542095 A0A0B4J2C4 111 aa7.61□□□□□ -1.19
NECAP1-206ENST00000542095 K7ERU9 68 aa7.61□□□□□ -1.19
NECAP1-206ENST00000542095 TIMM17BO60830 172 aa7.61□□□□□ -1.19
NECAP1-206ENST00000542095 FAM222AQ5U5X8 452 aa7.61□□□□□ -1.19
NECAP1-206ENST00000542095 LOC107984156A0A0G2JMH3 177 aa7.6□□□□□ -1.19
NECAP1-206ENST00000542095 SMIM1B2RUZ4 78 aa7.6□□□□□ -1.19
NECAP1-206ENST00000542095 F8W1H4 67 aa7.6□□□□□ -1.19
NECAP1-206ENST00000542095 H3BMG7 143 aa7.6□□□□□ -1.19
NECAP1-206ENST00000542095 GYPEP15421 78 aa7.6□□□□□ -1.19
NECAP1-206ENST00000542095 ARL17AQ8IVW1 177 aa7.6□□□□□ -1.19
NECAP1-206ENST00000542095 CHCHD5Q9BSY4 110 aa7.6□□□□□ -1.19
NECAP1-206ENST00000542095 PRO0255Q9UI72 69 aa7.6□□□□□ -1.19
NECAP1-206ENST00000542095 WIPF1O43516 503 aa7.6□□□□□ -1.19
NECAP1-206ENST00000542095 PRSS2P07478 247 aa7.6□□□□□ -1.19
NECAP1-206ENST00000542095 MIAQ16674 131 aa7.6□□□□□ -1.19
NECAP1-206ENST00000542095 ATP6V0E2Q8NHE4 81 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms