RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 GAGE12JA6NER3 117 aa9.3□□□□□ -0.92
GARNL3-220ENST00000496711 GAGE4Q13068 117 aa9.3□□□□□ -0.92
GARNL3-220ENST00000496711 GAGE5Q13069 117 aa9.3□□□□□ -0.92
GARNL3-220ENST00000496711 GAGE13Q4V321 117 aa9.3□□□□□ -0.92
GARNL3-220ENST00000496711 PGPEP1Q9NXJ5 209 aa9.3□□□□□ -0.92
GARNL3-220ENST00000496711 TRAV8-3A0A0A6YYJ7 113 aa9.3□□□□□ -0.92
GARNL3-220ENST00000496711 TMEM238C9JI98 176 aa9.3□□□□□ -0.92
GARNL3-220ENST00000496711 C10orf126Q8N4M7 172 aa9.3□□□□□ -0.92
GARNL3-220ENST00000496711 GEMIN7Q9H840 131 aaKnown RBP9.3□□□□□ -0.92
GARNL3-220ENST00000496711 RBX1P62877 108 aa9.29□□□□□ -0.92
GARNL3-220ENST00000496711 NTM-AS1Q6ZSK4 140 aa9.29□□□□□ -0.92
GARNL3-220ENST00000496711 NOTCH3Q9UM47 2321 aa9.29□□□□□ -0.92
GARNL3-220ENST00000496711 A0A0J9YXY3 114 aa9.28□□□□□ -0.92
GARNL3-220ENST00000496711 TRBV6-4A0A1B0GX49 114 aa9.28□□□□□ -0.92
GARNL3-220ENST00000496711 APOMO95445 188 aa9.28□□□□□ -0.92
GARNL3-220ENST00000496711 SMAGPQ0VAQ4 97 aa9.28□□□□□ -0.92
GARNL3-220ENST00000496711 SBSPONQ8IVN8 264 aa9.28□□□□□ -0.92
GARNL3-220ENST00000496711 VSIG2Q96IQ7 327 aa9.28□□□□□ -0.92
GARNL3-220ENST00000496711 CSDC2Q9Y534 153 aaKnown RBP9.28□□□□□ -0.92
GARNL3-220ENST00000496711 NIPBLQ6KC79 2804 aaeCLIP9.28□□□□□ -0.92
GARNL3-220ENST00000496711 IGLV5-45A0A087WSX0 123 aa9.28□□□□□ -0.92
GARNL3-220ENST00000496711 SPINK8P0C7L1 97 aa9.28□□□□□ -0.92
GARNL3-220ENST00000496711 LINC00694P0DN24 101 aa9.28□□□□□ -0.92
GARNL3-220ENST00000496711 TIRAPP58753 221 aa9.28□□□□□ -0.92
GARNL3-220ENST00000496711 TRGV4A0A0C4DH28 118 aa9.27□□□□□ -0.93
GARNL3-220ENST00000496711 K7ERU9 68 aa9.27□□□□□ -0.93
GARNL3-220ENST00000496711 TSPAN13O95857 204 aa9.27□□□□□ -0.93
GARNL3-220ENST00000496711 INSL3P51460 131 aa9.27□□□□□ -0.93
GARNL3-220ENST00000496711 GTSF1LQ9H1H1 148 aa9.27□□□□□ -0.93
GARNL3-220ENST00000496711 C9orf66Q5T8R8 295 aa9.26□□□□□ -0.93
GARNL3-220ENST00000496711 NDUFA12Q9UI09 145 aa9.26□□□□□ -0.93
GARNL3-220ENST00000496711 CBY1Q9Y3M2 126 aa9.26□□□□□ -0.93
GARNL3-220ENST00000496711 NSD1Q96L73 2696 aaPredicted RBP9.26□□□□□ -0.93
GARNL3-220ENST00000496711 CFC1BP0CG36 223 aa9.25□□□□□ -0.93
GARNL3-220ENST00000496711 CFC1P0CG37 223 aa9.25□□□□□ -0.93
GARNL3-220ENST00000496711 HERVK_113P63121 156 aa9.25□□□□□ -0.93
GARNL3-220ENST00000496711 RPL24P83731 157 aaKnown RBP9.25□□□□□ -0.93
GARNL3-220ENST00000496711 FAM19A3Q7Z5A8 133 aa9.25□□□□□ -0.93
GARNL3-220ENST00000496711 CDKN2A-AS1Q9UH64 79 aa9.25□□□□□ -0.93
GARNL3-220ENST00000496711 OTOGQ6ZRI0 2925 aa9.25□□□□□ -0.93
GARNL3-220ENST00000496711 LOC100131303A0A0U1RQF7 123 aa9.25□□□□□ -0.93
GARNL3-220ENST00000496711 UBE2L6O14933 153 aa9.25□□□□□ -0.93
GARNL3-220ENST00000496711 CRLF1O75462 422 aa9.25□□□□□ -0.93
GARNL3-220ENST00000496711 ZFAND6Q6FIF0 208 aa9.25□□□□□ -0.93
GARNL3-220ENST00000496711 TMEM243Q9BU79 118 aa9.25□□□□□ -0.93
GARNL3-220ENST00000496711 C2CD3Q4AC94 2353 aa9.25□□□□□ -0.93
GARNL3-220ENST00000496711 A4D1N5 150 aa9.24□□□□□ -0.93
GARNL3-220ENST00000496711 H3BMG7 143 aa9.24□□□□□ -0.93
GARNL3-220ENST00000496711 RNF151Q2KHN1 245 aa9.24□□□□□ -0.93
GARNL3-220ENST00000496711 LINC00242Q5T6M2 205 aa9.24□□□□□ -0.93
GARNL3-220ENST00000496711 LYRM7Q5U5X0 104 aa9.24□□□□□ -0.93
GARNL3-220ENST00000496711 LITAFQ99732 161 aa9.24□□□□□ -0.93
GARNL3-220ENST00000496711 A8MZ25 164 aa9.23□□□□□ -0.93
GARNL3-220ENST00000496711 F8W1H4 67 aa9.23□□□□□ -0.93
GARNL3-220ENST00000496711 FHL2Q14192 279 aa9.23□□□□□ -0.93
GARNL3-220ENST00000496711 MUSTN1Q8IVN3 82 aa9.23□□□□□ -0.93
GARNL3-220ENST00000496711 PRO1854Q9UHT4 67 aa9.23□□□□□ -0.93
GARNL3-220ENST00000496711 A0A0B4J2C4 111 aa9.23□□□□□ -0.93
GARNL3-220ENST00000496711 H7C423 109 aa9.23□□□□□ -0.93
GARNL3-220ENST00000496711 COX6A2Q02221 97 aa9.23□□□□□ -0.93
GARNL3-220ENST00000496711 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.23□□□□□ -0.93
GARNL3-220ENST00000496711 KIR2DL5BQ8NHK3 375 aa9.23□□□□□ -0.93
GARNL3-220ENST00000496711 TMEM101Q96IK0 257 aa9.23□□□□□ -0.93
GARNL3-220ENST00000496711 SPANXDQ9BXN6 97 aa9.23□□□□□ -0.93
GARNL3-220ENST00000496711 CDC42SE2Q9NRR3 84 aa9.23□□□□□ -0.93
GARNL3-220ENST00000496711 SPANXCQ9NY87 97 aa9.23□□□□□ -0.93
GARNL3-220ENST00000496711 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.22□□□□□ -0.93
GARNL3-220ENST00000496711 LINC00612Q8N6U2 182 aa9.22□□□□□ -0.93
GARNL3-220ENST00000496711 SPATA3Q8NHX4 192 aa9.22□□□□□ -0.93
GARNL3-220ENST00000496711 LOC107984156A0A0G2JMH3 177 aa9.21□□□□□ -0.93
GARNL3-220ENST00000496711 NDUFA1O15239 70 aa9.21□□□□□ -0.93
GARNL3-220ENST00000496711 ARL17AQ8IVW1 177 aa9.21□□□□□ -0.93
GARNL3-220ENST00000496711 FN1P02751 2386 aaKnown RBP9.21□□□□□ -0.94
GARNL3-220ENST00000496711 TRAV13-1A0A0B4J241 112 aa9.21□□□□□ -0.94
GARNL3-220ENST00000496711 IGLV5-39A0A0G2JS06 123 aa9.21□□□□□ -0.94
GARNL3-220ENST00000496711 SMIM9A6NGZ8 99 aa9.21□□□□□ -0.94
GARNL3-220ENST00000496711 X6R8D5 127 aa9.21□□□□□ -0.94
GARNL3-220ENST00000496711 NOTCH2Q04721 2471 aa9.2□□□□□ -0.94
GARNL3-220ENST00000496711 EIF4EBP3O60516 100 aaPredicted RBP9.2□□□□□ -0.94
GARNL3-220ENST00000496711 TIMM17BO60830 172 aa9.2□□□□□ -0.94
GARNL3-220ENST00000496711 DEFB130BP0DP73 79 aa9.2□□□□□ -0.94
GARNL3-220ENST00000496711 DEFB130AP0DP74 79 aa9.2□□□□□ -0.94
GARNL3-220ENST00000496711 MIAQ16674 131 aa9.2□□□□□ -0.94
GARNL3-220ENST00000496711 SFTA2Q6UW10 78 aa9.2□□□□□ -0.94
GARNL3-220ENST00000496711 SMIM1B2RUZ4 78 aa9.19□□□□□ -0.94
GARNL3-220ENST00000496711 CITED1Q99966 193 aa9.19□□□□□ -0.94
GARNL3-220ENST00000496711 VPS25Q9BRG1 176 aa9.19□□□□□ -0.94
GARNL3-220ENST00000496711 PRO0461Q9UI25 63 aa9.19□□□□□ -0.94
GARNL3-220ENST00000496711 TRBV6-8A0A0A6YYG3 113 aa9.19□□□□□ -0.94
GARNL3-220ENST00000496711 WFDC2Q14508 124 aa9.19□□□□□ -0.94
GARNL3-220ENST00000496711 ADAMTSL4-AS1Q5T5F5 129 aa9.19□□□□□ -0.94
GARNL3-220ENST00000496711 G3V4G9 280 aa9.18□□□□□ -0.94
GARNL3-220ENST00000496711 IGHV3-33P01772 117 aa9.18□□□□□ -0.94
GARNL3-220ENST00000496711 PSMB2P49721 201 aa9.18□□□□□ -0.94
GARNL3-220ENST00000496711 TEX48A0A1B0GUV7 120 aa9.17□□□□□ -0.94
GARNL3-220ENST00000496711 PRSS2P07478 247 aa9.17□□□□□ -0.94
GARNL3-220ENST00000496711 GAGE6Q13070 117 aa9.17□□□□□ -0.94
GARNL3-220ENST00000496711 MTURNQ8N3F0 131 aa9.17□□□□□ -0.94
GARNL3-220ENST00000496711 TRBV20-1A0A075B6N2 111 aa9.17□□□□□ -0.94
GARNL3-220ENST00000496711 F5H768 121 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms