RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 IGHV3-30P01768 117 aa5.46□□□□□ -1.54
CCDC171-205ENST00000472806 IGHV3-30-3P0DP02 117 aa5.46□□□□□ -1.54
CCDC171-205ENST00000472806 IGHV3-30-5P0DP03 117 aa5.46□□□□□ -1.54
CCDC171-205ENST00000472806 OCIAD2Q56VL3 154 aa5.46□□□□□ -1.54
CCDC171-205ENST00000472806 HIST2H2BDQ6DRA6 164 aa5.46□□□□□ -1.54
CCDC171-205ENST00000472806 Q6ZTI0 123 aa5.46□□□□□ -1.54
CCDC171-205ENST00000472806 Q6ZUT4 128 aa5.46□□□□□ -1.54
CCDC171-205ENST00000472806 FAM19A3Q7Z5A8 133 aa5.46□□□□□ -1.54
CCDC171-205ENST00000472806 NAA38Q9BRA0 125 aaKnown RBP5.46□□□□□ -1.54
CCDC171-205ENST00000472806 TMEM243Q9BU79 118 aa5.46□□□□□ -1.54
CCDC171-205ENST00000472806 FBN2P35556 2912 aa5.45□□□□□ -1.54
CCDC171-205ENST00000472806 TRBV20-1A0A075B6N2 111 aa5.45□□□□□ -1.54
CCDC171-205ENST00000472806 IGLV5-45A0A087WSX0 123 aa5.45□□□□□ -1.54
CCDC171-205ENST00000472806 J3QR89 54 aa5.45□□□□□ -1.54
CCDC171-205ENST00000472806 TIMM17BO60830 172 aa5.45□□□□□ -1.54
CCDC171-205ENST00000472806 GIG44P09565 113 aaPredicted RBP5.45□□□□□ -1.54
CCDC171-205ENST00000472806 TSPEAR-AS2P59090 65 aa5.45□□□□□ -1.54
CCDC171-205ENST00000472806 CIRBPQ14011 172 aaKnown RBP5.45□□□□□ -1.54
CCDC171-205ENST00000472806 CSNK1G2-AS1Q8NCQ2 148 aa5.45□□□□□ -1.54
CCDC171-205ENST00000472806 KIR2DL5BQ8NHK3 375 aa5.45□□□□□ -1.54
CCDC171-205ENST00000472806 VSIG2Q96IQ7 327 aa5.45□□□□□ -1.54
CCDC171-205ENST00000472806 ZFYVE26Q68DK2 2539 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 CSMD1Q96PZ7 3565 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 A0A0B4J2C4 111 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 A0A0J9YXY3 114 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 GAGE12JA6NER3 117 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 GAGE7O76087 117 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 APOMO95445 188 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 GAGE12FP0CL80 117 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 GAGE12GP0CL81 117 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 GAGE12IP0CL82 117 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 IFITM1P13164 125 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 GAGE4Q13068 117 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 GAGE5Q13069 117 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 GAGE13Q4V321 117 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 ZFAND6Q6FIF0 208 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 SPANXDQ9BXN6 97 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 SPANXCQ9NY87 97 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 PRO1854Q9UHT4 67 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 NDUFA12Q9UI09 145 aa5.44□□□□□ -1.54
CCDC171-205ENST00000472806 POLQO75417 2590 aa5.43□□□□□ -1.54
CCDC171-205ENST00000472806 IGHV3-64A0A075B6Q5 118 aa5.43□□□□□ -1.54
CCDC171-205ENST00000472806 PLAC8L1A1L4L8 177 aa5.43□□□□□ -1.54
CCDC171-205ENST00000472806 APOC4P55056 127 aa5.43□□□□□ -1.54
CCDC171-205ENST00000472806 CEMP1Q6PRD7 247 aaPredicted RBP5.43□□□□□ -1.54
CCDC171-205ENST00000472806 SBSPONQ8IVN8 264 aa5.43□□□□□ -1.54
CCDC171-205ENST00000472806 C10orf126Q8N4M7 172 aa5.43□□□□□ -1.54
CCDC171-205ENST00000472806 FAM104AQ969W3 186 aa5.43□□□□□ -1.54
CCDC171-205ENST00000472806 RNF183Q96D59 192 aa5.43□□□□□ -1.54
CCDC171-205ENST00000472806 SMR3AQ99954 134 aa5.43□□□□□ -1.54
CCDC171-205ENST00000472806 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
CCDC171-205ENST00000472806 UTP20O75691 2785 aaKnown RBP5.43□□□□□ -1.54
CCDC171-205ENST00000472806 LOC107984156A0A0G2JMH3 177 aa5.42□□□□□ -1.54
CCDC171-205ENST00000472806 LYRM9A8MSI8 78 aa5.42□□□□□ -1.54
CCDC171-205ENST00000472806 INAFM1C9JVW0 142 aa5.42□□□□□ -1.54
CCDC171-205ENST00000472806 NDUFA1O15239 70 aa5.42□□□□□ -1.54
CCDC171-205ENST00000472806 TSPAN13O95857 204 aa5.42□□□□□ -1.54
CCDC171-205ENST00000472806 CFC1BP0CG36 223 aa5.42□□□□□ -1.54
CCDC171-205ENST00000472806 CFC1P0CG37 223 aa5.42□□□□□ -1.54
CCDC171-205ENST00000472806 HERV-K104P63124 156 aa5.42□□□□□ -1.54
CCDC171-205ENST00000472806 MIAQ16674 131 aa5.42□□□□□ -1.54
CCDC171-205ENST00000472806 RNASE13Q5GAN3 156 aaKnown RBP5.42□□□□□ -1.54
CCDC171-205ENST00000472806 MUSTN1Q8IVN3 82 aa5.42□□□□□ -1.54
CCDC171-205ENST00000472806 ARL17AQ8IVW1 177 aa5.42□□□□□ -1.54
CCDC171-205ENST00000472806 VPS25Q9BRG1 176 aa5.42□□□□□ -1.54
CCDC171-205ENST00000472806 WFDC10AQ9H1F0 79 aa5.42□□□□□ -1.54
CCDC171-205ENST00000472806 CDC42SE2Q9NRR3 84 aa5.42□□□□□ -1.54
CCDC171-205ENST00000472806 ERG28Q9UKR5 140 aa5.42□□□□□ -1.54
CCDC171-205ENST00000472806 NACAE9PAV3 2078 aa5.41□□□□□ -1.54
CCDC171-205ENST00000472806 A4D1N5 150 aa5.41□□□□□ -1.54
CCDC171-205ENST00000472806 CRLF1O75462 422 aa5.41□□□□□ -1.54
CCDC171-205ENST00000472806 SPINK8P0C7L1 97 aa5.41□□□□□ -1.54
CCDC171-205ENST00000472806 SCGB1C2P0DMR2 95 aa5.41□□□□□ -1.54
CCDC171-205ENST00000472806 KRTAP10-3P60369 221 aa5.41□□□□□ -1.54
CCDC171-205ENST00000472806 RBX1P62877 108 aa5.41□□□□□ -1.54
CCDC171-205ENST00000472806 FHL2Q14192 279 aa5.41□□□□□ -1.54
CCDC171-205ENST00000472806 RNF151Q2KHN1 245 aa5.41□□□□□ -1.54
CCDC171-205ENST00000472806 LINC00242Q5T6M2 205 aa5.41□□□□□ -1.54
CCDC171-205ENST00000472806 LINC00612Q8N6U2 182 aa5.41□□□□□ -1.54
CCDC171-205ENST00000472806 Q9UF83 564 aa5.41□□□□□ -1.54
CCDC171-205ENST00000472806 ASH1LQ9NR48 2969 aaKnown RBP5.41□□□□□ -1.54
CCDC171-205ENST00000472806 TRAV8-3A0A0A6YYJ7 113 aa5.4□□□□□ -1.54
CCDC171-205ENST00000472806 IGLV5-39A0A0G2JS06 123 aa5.4□□□□□ -1.54
CCDC171-205ENST00000472806 G3V4G9 280 aa5.4□□□□□ -1.54
CCDC171-205ENST00000472806 H3BMG7 143 aa5.4□□□□□ -1.54
CCDC171-205ENST00000472806 PRSS2P07478 247 aa5.4□□□□□ -1.54
CCDC171-205ENST00000472806 COX6CP09669 75 aa5.4□□□□□ -1.54
CCDC171-205ENST00000472806 PSMB2P49721 201 aa5.4□□□□□ -1.54
CCDC171-205ENST00000472806 SFTA2Q6UW10 78 aa5.4□□□□□ -1.54
CCDC171-205ENST00000472806 NTM-AS1Q6ZSK4 140 aa5.4□□□□□ -1.54
CCDC171-205ENST00000472806 Q8N1X5 172 aa5.4□□□□□ -1.54
CCDC171-205ENST00000472806 ATP6V0E2Q8NHE4 81 aa5.4□□□□□ -1.54
CCDC171-205ENST00000472806 PPDPFQ9H3Y8 114 aa5.4□□□□□ -1.54
CCDC171-205ENST00000472806 CDKN2A-AS1Q9UH64 79 aa5.4□□□□□ -1.54
CCDC171-205ENST00000472806 SORL1Q92673 2214 aa5.4□□□□□ -1.55
CCDC171-205ENST00000472806 ABCA12Q86UK0 2595 aa5.4□□□□□ -1.55
CCDC171-205ENST00000472806 SVEP1Q4LDE5 3571 aa5.39□□□□□ -1.55
CCDC171-205ENST00000472806 ITPR3Q14573 2671 aa5.39□□□□□ -1.55
CCDC171-205ENST00000472806 TRBV6-8A0A0A6YYG3 113 aa5.39□□□□□ -1.55
CCDC171-205ENST00000472806 TRAV13-1A0A0B4J241 112 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms